| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,408,718 | G→C | 7.8% | P330A (CCG→GCG) | spoIIIAE ← | stage III sporulation protein AE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,408,718 | 0 | G | C | 7.8% | 620.5 / 3.9 | 268 | P330A (CCG→GCG) | spoIIIAE | stage III sporulation protein AE |
| Reads supporting (aligned to +/- strand): ref base G (108/112); new base C (2/22); total (110/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 269 total aligned reads displayed.
GCGAGAGCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCGGTTATAAA > NZ_CP034943/2408582‑2408856 | gCGAGAGCTGCAAAAATATAAATGCCGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGaaa < 1:3243905/140‑1 (MQ=255)gCGAGAGCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGACTCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGaaa < 2:3216403/140‑1 (MQ=255)gCGAGAGCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGaaa < 1:4417357/140‑1 (MQ=255)gCGAGAGCTGCAAAAATATAAAGGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGaaa < 1:2834772/140‑1 (MQ=255) cGAGAGCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGaaaa < 1:3354567/140‑1 (MQ=255) agagCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGc > 2:1139013/1‑140 (MQ=255) agagCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGc > 1:2188138/1‑140 (MQ=255) agagCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGc > 1:340066/1‑140 (MQ=255) agagCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGc > 1:5007286/1‑140 (MQ=255) agCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCg < 2:4655677/140‑1 (MQ=255) gCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGc > 2:4168048/1‑140 (MQ=255) gCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGc > 2:36711/1‑140 (MQ=255) cacaaaTATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa < 1:2057771/137‑1 (MQ=255) cAAAAATATAACTGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa < 1:3220700/140‑1 (MQ=255) cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa < 1:3564780/140‑1 (MQ=255) cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa > 1:2358529/1‑140 (MQ=255) cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa < 1:5599977/140‑1 (MQ=255) cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa > 1:5699210/1‑140 (MQ=255) cAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa > 1:3120911/1‑140 (MQ=255) cAAAAATATAAATGACCCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa > 1:3378065/1‑140 (MQ=255) cGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACa > 1:5570671/1‑127 (MQ=255) cGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCg > 2:2786442/1‑140 (MQ=255) cGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCg > 2:816798/1‑140 (MQ=255) gCTTTTGCTGATGACTTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGa > 1:4046934/1‑140 (MQ=255) ttGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTCTAAATAAAAGCGAGGGACAGCACTTTGATTGCCGGAACAGCCGCAATACAGATCAAAATAGCGACTcc > 1:5654022/1‑140 (MQ=255) ttgccGTCGCGGCAGTTAATGCCGGGCCCGCCTCCACGCGGCTGAAGAATCGCGGCTGCCAGTTTATAAATAAACGCGAGGGAAAGCACTTTGTTTGCCGCAAAACCCGAAATACAGATCAAAATAGCGACTCCGAGAAt < 1:2472573/136‑1 (MQ=255) atgaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAAt > 2:194106/1‑140 (MQ=255) atgaCGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGATTATAAATAAACGCGAGGGAAAGCACTTTTATTGCCGCAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAAt < 2:4820596/140‑1 (MQ=255) agaCGTCGATGCAGTTAATGACGGGCCCGCCTCCAATCGGCTGAAGAATCGCGGCTGCCAGCTTAGAAAGAAAAGCGAGGTAAATCACTTTGATTGGCTGAAAAGACGAAATACAGATCAAAATACCGAATCCGAGCATc > 1:4913685/2‑140 (MQ=255) gTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTa > 1:2409750/1‑140 (MQ=255) cGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACt > 2:4328232/1‑140 (MQ=255) gTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAATCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTAttttt > 1:1811124/1‑140 (MQ=255) tAATGACGGGCCCGCCTCCACGCGGCTGAACAATCGCGGCTGCAAGCTTATAAACAAAAGCGAGGGAACGCACTTTGATTCCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTc < 2:4902995/140‑1 (MQ=255) tAATGACGGGCCCGCCTCCAAGCGGCTGATGAATCGCGGCTGCCAGCTTATAAATAAACGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTc < 2:536525/140‑1 (MQ=255) tAATGACGGGCCCGCCACCAAGCGGCTTAACAATGGCGGCTGCACGCTTATAAATAAACGCGCGGTAACGCACTTTGATTGCCGCAAACGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTc < 2:2518306/140‑1 (MQ=255) aTGACGGCCCCCCCTCCACGCGGTTGAAGACGCGCGGCTGCCCGCTTATAAATAAACGCGAGGGAACGCACTTTCATTGCCGGAAACGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTcag < 2:5053540/140‑1 (MQ=255) cggggCCCGCCTCCCCGCGGCTGATGAATGGCGGGTGCCAGCTTTTAAATAAACGCGAGGTCACGCAATGTGATTGCGGGAAAAGCCGCAATACAGAGCATAATCGCGACTCCGAGAATCCCTACTGTATTTTTcagcag < 2:1325490/138‑1 (MQ=255) ccGGGCCCGCCTCCAAGCGGCTTAATAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTcagcag < 2:1347026/139‑1 (MQ=255) aCGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTcctgtc > 2:544677/1‑135 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAACGCACTTTGATTGCCGGaaa > 1:1785348/1‑79 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAg > 1:2639137/1‑140 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAg > 1:4736754/1‑140 (MQ=255) gCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATACCTACTGTATTTTTCAGCAGTAAg > 2:4041999/1‑140 (MQ=255) cgccACGCGGCTGAAGACTCGCGGCTGCCCTCTTATAAATAAACGCGCGGGAAAGCACTTTGATTGCCGCAAACGCCGAATTACACAAAAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAgcg < 1:3499843/138‑1 (MQ=255) cTCCAAGCGGATGAAGAATGGCGGCGGCCAGATTATAAATAAAACCGAGGAAAACCACTTTGATGGCCGCAAAAGCGCAAATAAAGATCAAAAAAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAgcg < 1:3831625/140‑1 (MQ=255) ccACGCGGCTGAAGAATCGCGGCTGCCATCTTATAAATAAAAGCGCGGCAAAGCACTTTGATTGCCGGAAAAGCCGAAATACTGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCt < 2:700579/140‑1 (MQ=255) cAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATa > 2:3491208/1‑80 (MQ=255) aGCGGCTTAATAATCGCGGCTCCAAGATTAAAAATAAATGCGAGTCAAAGAAATTTGATTGCCGGAAACGCCGAAATACTGAACAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGAt < 1:4473802/140‑1 (MQ=255) aGCGGCTTAAGAAGCGCGGCTGCCAGCTTATAAATACACCCCAGGGAAAGCAATTTGATGGCCGGAAAAGCCGCAATACACATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGAt < 1:5511398/140‑1 (MQ=255) gCGGCTGACGATCCGCGGCTGCCATTTTATAAATAAAAGCGAGGGAACCAACTTTGATTGCCGGAAAAGCCCCAATACACATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATc < 1:1096651/140‑1 (MQ=255) ggCTTATGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGTAAAGCACTTTGATTGCCTGAAAAGCGGAATTACACATAAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATcac < 2:1505475/140‑1 (MQ=255) ggCTGACGAATCGCGGCTGCAAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATcac < 2:3848016/140‑1 (MQ=255) ggCTGAAGAATCGCGGCTGCCAGATTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATcac < 2:2879937/140‑1 (MQ=255) gCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGaaa > 2:1807998/1‑64 (MQ=255) cTGAAGAATCGCTGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCAGAGAATCCGTACTGTATTTTTCAGCAGTAAGGAAGCGCTCATcacat > 1:2401561/1‑139 (MQ=255) cTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCACAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAg > 1:3465697/1‑140 (MQ=255) cTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAg > 1:1516029/1‑140 (MQ=255) cTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAg > 1:5435741/1‑140 (MQ=255) aTCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGt < 2:5647071/140‑1 (MQ=255) tCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTc > 2:707614/1‑140 (MQ=255) cggcgCTGCCAGCTTATAAATAAAAGCGAGGGAAATCACTTTCATTGCCGTAAAAGCCCCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcg < 2:4860700/136‑1 (MQ=255) cgcgGCTGCCAGCTTATAAATAAACGCGAGGGAAAGCACTTTGCTTCCCGGAAACCCCGCAATACAGATCAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcg < 2:2155950/140‑1 (MQ=255) cgcgGCTGCCAGATTATAAAAAACCGCGTGGCAAAGCACTTTGTTTGCCGCAAACGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcg < 1:816872/140‑1 (MQ=255) cgcgGCTGCCAGATTAAAAATAAAAGCGAGGCAAAGCACTTTTATTGCCGCAAAAGCCGAAATACACATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcg < 2:2191704/140‑1 (MQ=255) cgcgGCGGCCAGCTTATAATCAAAAGCTAGGGAAAGCACTTTTTTGCCCGAAAAAGCCGCAATCCTGACCAAAACAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcg < 1:3776485/140‑1 (MQ=255) gcgGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTcgc > 1:4920320/1‑140 (MQ=255) gCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGt > 2:2017013/1‑140 (MQ=255) gCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGt > 2:184199/1‑140 (MQ=255) gCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGt > 2:1648123/1‑140 (MQ=255) ccAGTTTATAAAAAAAAGCGCGGGAAAGCACTTTTATTGCCGTAAAAGCCGAAATACAGATAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTa < 1:5399214/140‑1 (MQ=255) ccAGCTTATAAATAAACGCGAGGGAACGCACTTTGATTGCCGGAAAAGCCGCAATAAAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTa < 1:4601837/140‑1 (MQ=255) caatcTTATAAAAAAACGCGCGGTAAAGCACTTTGATTGCCGGAAAAGCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTa < 1:4347477/136‑1 (MQ=255) cTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACa < 2:5487252/140‑1 (MQ=255) tataAATAAAAGCGAGGGAAAGCAATTTGATTCCCGGAAAAGCCGCAATACACATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACAtt < 1:5315367/140‑1 (MQ=255) atcaacgCGAGGCAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTAATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:1771467/134‑1 (MQ=255) ataaaCGGGTGGTAACGCACTTTTTTGGCCGTAACAGCCGAAATAAAGATAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 1:677319/140‑1 (MQ=255) ataaaAGCGAGGGAACGCAGTTTGATTGCCGGAAAACCCGAAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:2441374/140‑1 (MQ=255) ataaaAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 2:5301610/140‑1 (MQ=255) ataaaAGCGAGGGAAAGAAGTTTGATTGCCGGAAAAGCCGAAATACACATAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc < 1:1668126/140‑1 (MQ=255) cgCGAGGGAAAGCACTTTGTTTGCCGGAAACGCCGAAATACACATAAAAAACGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTa < 1:2965475/139‑1 (MQ=255) cgCGAGGCAACGAATTTTGATTCCCGCAAATGCCGAAATACAGATCAAAAGCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTa < 1:909233/139‑1 (MQ=255) aGCGAGGTAACCCATTTTGATTGCCGGAAAAGCCGAAATACAGAAAAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTa < 1:2863443/140‑1 (MQ=255) aGCGAGGGAAAGCACTTTGATTGCCGTAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTa < 2:4126532/140‑1 (MQ=255) cGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATCGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACa < 2:38963/140‑1 (MQ=255) gAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGcc > 1:1052238/1‑132 (MQ=255) aGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAgg > 1:126998/1‑140 (MQ=255) aGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATaaa > 1:797678/1‑140 (MQ=255) aGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATaaa > 1:2580016/1‑140 (MQ=255) aGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACAGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGAACAGGAATaaa > 2:4970960/1‑140 (MQ=255) aGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAAGCCCTACTGTATTTTTCAGCAGTACGGAAGCGATGATCACAGTATCTGTCGCGTCTCTAAACATACGGCCAAGTACAGGAATaaa > 1:1917350/1‑140 (MQ=255) cACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTc > 1:4175131/1‑70 (MQ=255) cACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTc < 2:4175131/70‑1 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTCCTGTATTTTTCAGCAGTAAGGAAGAGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCg > 2:4483718/1‑140 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCg > 1:5470364/1‑140 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCg > 1:4100882/1‑140 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCg > 2:5707342/1‑140 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGAGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCg > 2:3152886/1‑140 (MQ=255) tGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTGTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCg > 1:1901033/1‑140 (MQ=255) gCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCt > 1:4853692/1‑77 (MQ=255) ccGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTCCTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCGGTtata > 1:2505276/1‑140 (MQ=255) | GCGAGAGCTGCAAAAATATAAATGACGCTTTTGCTGATGACGTCGAGGCAGGTAATGACGGGCCCGCCTCCAAGCGGCTGAAGAATCGCGGCTGCCAGCTTATAAATAAAAGCGAGGGAAAGCACTTTGATTGCCGGAAAAGCCGCAATACAGATCAAAATAGCGACTCCGAGAATCCCTACTGTATTTTTCAGCAGTAAGGAAGCGCTGATCACAGTATCTGTCGCGTCTGTAAACATTCGGCCAAGTACAGGAATAAAGTTTCCGGTTATAAA > NZ_CP034943/2408582‑2408856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |