| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,589,693 | T→G | 8.1% | intergenic (‑52/+339) | EO946_RS13405 ← / ← EO946_RS13410 | YrzI family small protein/formate/nitrite transporter family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,589,693 | 0 | T | G | 8.1% | 607.0 / 3.1 | 259 | intergenic (‑52/+339) | EO946_RS13405/EO946_RS13410 | YrzI family small protein/formate/nitrite transporter family protein |
| Reads supporting (aligned to +/- strand): ref base T (90/135); new base G (2/31); total (93/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.77e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 297 total aligned reads displayed.
GCTCAATCTGCTGTTCCCGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACGAACT > NZ_CP034943/2589554‑2589832 | cTCAATCTGCTGTTCCCGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAtt > 2:2280467/1‑140 (MQ=255) cTCAATCTGCTGTTCCCGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAtt > 2:2193580/1‑140 (MQ=255) cTCAATCTGCTGTTCCCGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAtt > 2:1700177/1‑140 (MQ=255) cTCAATCTGCTGTTCCCGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAtt > 2:5673580/1‑140 (MQ=255) cTCAATCTGCTGTTCCCGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAAGCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAtt > 1:1637792/1‑140 (MQ=255) ccGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGc < 1:5172983/140‑1 (MQ=255) ccGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGc < 1:2093932/140‑1 (MQ=255) ccGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAAACCGCGGCATCATTCCTTCTGCCGCGGGc < 2:1353618/140‑1 (MQ=255) gTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCaa > 2:4999507/1‑140 (MQ=255) gTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCaa > 1:1474266/1‑140 (MQ=255) ttCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCaaa > 1:4974551/1‑140 (MQ=255) ttcCTGGCTTTTAAACCGTTTGTTAATAGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAAcc < 1:3520348/140‑1 (MQ=255) tcCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCg < 2:203884/140‑1 (MQ=255) cTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCa < 2:4570513/140‑1 (MQ=255) ggCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGa < 1:3869681/140‑1 (MQ=255) ttAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACaaaa > 1:5060957/1‑140 (MQ=255) aaCCGTTTTTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAaagaa < 2:743457/140‑1 (MQ=255) aaCCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAaagaa < 2:5507899/140‑1 (MQ=255) aCCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAaagaag < 1:2443460/140‑1 (MQ=255) aCCGTTTGTTAAGCGGTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCGTCTGCCGCGGGCAAATAAAAAACCGCAGACAAaagaag < 1:1743136/140‑1 (MQ=255) tttGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGacac > 2:2928271/1‑140 (MQ=255) ttGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATCTCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAACAACCGCAGACAAAAGAAGACAcc < 2:5293648/140‑1 (MQ=255) ttGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACAcc < 1:1315606/140‑1 (MQ=255) ttGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACAcc < 2:3425090/140‑1 (MQ=255) ttGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACAcc < 1:4519172/140‑1 (MQ=255) tctgtAATCGATAACGCTAAAAAGAATAGCTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCCTCATTCCTTCTGCCGCGGGCAAATACAAAACCGCAGACAAAAGAAGACAcc < 1:3209914/136‑1 (MQ=255) gtgtgAATCGTTAAAGTTACAAAGTATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTGCACGCGAAATAACCCGCGGCATCATTCCGTCTGCCGCGGGCAAATAAAAAACCGCACACAAAAGAAGACAcc < 2:4272580/139‑1 (MQ=255) gagaaTCGATAACGTAAAAAAGAAGAGGTTAATCGTCATATCGCTCACCCCCTTTCAACTCCGCTTCAAGCGAAATAACCCGAGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCACACAAAAGAAGACACCaa < 1:5609662/137‑1 (MQ=255) gTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCaa < 2:192457/140‑1 (MQ=255) gTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCaa < 1:3417194/140‑1 (MQ=255) tAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATg < 2:3574518/140‑1 (MQ=255) ttaacgttaaAAAGAAGAGGTTAATCGTCAGAGCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAAGAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTa < 2:2451310/140‑1 (MQ=255) taacgttaaAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTAc < 1:4213155/140‑1 (MQ=255) taacgttaaAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTAc < 2:5120463/140‑1 (MQ=255) aaaaaGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGcatcat > 2:350831/1‑75 (MQ=255) aaaaGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCg < 2:697806/140‑1 (MQ=255) aaaaGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCCATGCCTCTACTGCCTGCg < 2:571939/140‑1 (MQ=255) aaGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCggg < 1:19429/140‑1 (MQ=255) aaGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCGTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCggg < 1:5436499/140‑1 (MQ=255) aagaGGTTAATCGTCATCTCGCCCACCCCCGCGCAACTCCGCGTCAAGCGAAAGAACCCGCGGCCGCAGTCCGCCTGCCGCGGGCAAATAAAAAACCGCAGACCACCGAAGACACCCATGCCTCGACTGCCTGCGGGGAg < 1:392777/137‑1 (MQ=255) aaTAGGTTACTCCTCATATCGCTCACCCCCTTTCAACTCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCACGGCCTCTACTGCCTGCGGGGAg < 1:4766764/140‑1 (MQ=255) aaTAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAg < 2:1516662/140‑1 (MQ=255) aaTAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATGCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAg < 1:1009331/140‑1 (MQ=255) aaTAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAg < 1:2856220/140‑1 (MQ=255) aaTAGGTTAATCGTCATATCGCTCACCCCCTGTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAACGAAGACACCAATGCCTCTACTGCCTGCGGGGAg < 1:2939799/140‑1 (MQ=255) aTAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGt > 2:3006009/1‑140 (MQ=255) aTAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGt > 2:242360/1‑140 (MQ=255) tAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGcatcat > 1:99244/1‑67 (MQ=255) gTTAATCGTCATATCGCTCACCCCCTTTCAACTCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCg < 1:1100005/140‑1 (MQ=255) gTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCg > 2:91141/1‑140 (MQ=255) aaTCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTAt > 2:4927855/1‑140 (MQ=255) tCGTCATATCGCTCACCCCCTTTCAACTCCGCTTCAAGCGAAATAACCCGCGGCCTCAGGCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGt < 1:2754002/140‑1 (MQ=255) tCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCaa < 2:4517657/108‑1 (MQ=255) tCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGt > 1:3475132/1‑140 (MQ=255) tCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGt > 1:159860/1‑140 (MQ=255) tCGTCATATCGCTCACCCCATTTCAAATCCGCTTCAAGAGAAATAACCCGCGGCATCATTCCTTCTGACGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACAACAATCCCTCTACTGACTGAGGGGAGTTTCGTATGt > 1:4390616/1‑140 (MQ=255) atatCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCaa > 1:1998775/1‑103 (MQ=255) atatCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGAc < 1:5673580/140‑1 (MQ=255) atatCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGAc > 1:4824989/1‑140 (MQ=255) cTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGt > 1:4643707/1‑129 (MQ=255) cTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGt < 2:4643707/129‑1 (MQ=255) cTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTc > 2:2705044/1‑140 (MQ=255) cTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTc > 2:2753235/1‑140 (MQ=255) cTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTc < 1:3783472/140‑1 (MQ=255) cTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTc < 1:3620978/140‑1 (MQ=255) cACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCg > 1:469261/1‑140 (MQ=255) ccccTTTCAAATCCGGTTCAAGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAAGTCCGAAt > 2:2787603/1‑140 (MQ=255) ccccTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAAt > 1:3672657/1‑140 (MQ=255) ccccTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGGCTGTCCGACTAATTCCGAAt > 2:3190284/1‑140 (MQ=255) ttCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAAt > 1:2667678/1‑140 (MQ=255) ttCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAAt > 2:4453415/1‑140 (MQ=255) aaaTCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAAtgcg < 2:4824989/140‑1 (MQ=255) aTCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAAtgcgtg > 2:296645/1‑140 (MQ=255) ccGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAAtgcgtgcg > 1:5794743/1‑140 (MQ=255) ccGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAAtgcgtgcg > 1:5311317/1‑140 (MQ=255) gCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGAt > 1:765343/1‑140 (MQ=255) aaGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAACTAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCa < 2:362403/140‑1 (MQ=255) aaGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCa < 2:3128518/140‑1 (MQ=255) aaGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCa < 2:3649876/140‑1 (MQ=255) aaGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAACAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCa < 2:4765196/140‑1 (MQ=255) aaGCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACCAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCa < 2:1474189/140‑1 (MQ=255) aGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCAt < 2:1575624/140‑1 (MQ=255) aGCGAAATAACCCGCGGCATCAGTCCGTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCAt < 2:52492/140‑1 (MQ=255) gCGAAATAACCCGCGGCATCAGTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACCCCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATc < 2:3093779/140‑1 (MQ=255) cccGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTaagga < 2:5037598/140‑1 (MQ=255) cccGCGGCATCAGTCCTTCTGCCGCGGGCAAAGAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTaagga < 1:4937375/140‑1 (MQ=255) ggCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATa < 2:4373906/120‑1 (MQ=255) ggCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATa > 1:4373906/1‑120 (MQ=255) ggCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATa < 2:3327269/120‑1 (MQ=255) ggCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATa > 1:3327269/1‑120 (MQ=255) ggCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCa > 2:4107038/1‑124 (MQ=255) ggCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCa < 1:4107038/124‑1 (MQ=255) ggCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGac > 2:3947904/1‑140 (MQ=255) atcatTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACg < 1:1523558/140‑1 (MQ=255) atcatTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACg < 1:3046788/140‑1 (MQ=255) catTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACGaa < 2:3863253/140‑1 (MQ=255) catGCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACGaa < 1:2280467/140‑1 (MQ=255) ttCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACGAAct < 2:2117189/140‑1 (MQ=255) ttCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACGAAct < 2:1749638/140‑1 (MQ=255) ttCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACGAAct < 2:1142252/140‑1 (MQ=255) | GCTCAATCTGCTGTTCCCGTTCGAATTCTTCCTGGCTTTTAAACCGTTTGTTAATCGTTAACGTTAAAAAGAATAGGTTAATCGTCATATCGCTCACCCCCTTTCAAATCCGCTTCAAGCGAAATAACCCGCGGCATCATTCCTTCTGCCGCGGGCAAATAAAAAACCGCAGACAAAAGAAGACACCAATGCCTCTACTGCCTGCGGGGAGTTGCGTATGTCCGACTAATTCCGAATTTAATGCGTGCGATAAGCATCGGTTAAGGAAGGACACGAACT > NZ_CP034943/2589554‑2589832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |