| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,709,410 | T→C | 5.1% | L22L (TTA→CTA) | EO946_RS13995 → | YsnF/AvaK domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,709,410 | 0 | T | C | 5.1% | 722.2 / 15.2 | 214 | L22L (TTA→CTA) | EO946_RS13995 | YsnF/AvaK domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (117/84); new base C (5/6); total (124/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
TGTTTATTTTAAAGAGCATCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGAATCTGAATCTTTTTTCGATA > NZ_CP034943/2709271‑2709548 | tGTTTATTTTAAAGAGCATCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCttat < 2:3246698/140‑1 (MQ=255)tGTTTATTTTAAAGAGCATCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCttat > 1:3246698/1‑140 (MQ=255) ttttAAAGAGCATCGGGAATTACACACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACaa < 1:1245188/140‑1 (MQ=255) ttttAAAGAGCATCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACaa < 1:2672719/140‑1 (MQ=255) ttttAAAGAGCATCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACaa < 1:42192/140‑1 (MQ=255) cATCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGa > 1:2198427/1‑140 (MQ=255) tCGGTAATTACAAACGACATTAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGAtt < 2:2890361/140‑1 (MQ=255) tCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGAtt < 2:2178764/140‑1 (MQ=255) tCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGAtt < 1:2279189/140‑1 (MQ=255) tCGGCAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGAtt < 2:4991223/140‑1 (MQ=255) ggAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTg > 2:583872/1‑140 (MQ=255) ggAATTACAAACGACAAGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATAGGAAAAGTAAAGTTGGTGTCTACGAACCTCCGCAAGAAAACAGAGCCGCGATTGAAGGGTTAGTAACACAAGGCTATGATGCTg > 2:3752087/1‑140 (MQ=255) atttACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTACTAACAAAAGGCTATGATTCTgac < 2:1293020/138‑1 (MQ=255) ttACAAACGACATGAACTATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTgacga < 1:3077219/140‑1 (MQ=255) ttACAAACGACATGAACGATAAAATGAATATTGATAAATGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTgacga < 2:1171567/140‑1 (MQ=255) tACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTgacgac > 1:3429644/1‑140 (MQ=255) tACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTgacgac > 2:2673099/1‑140 (MQ=255) aTGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCtgttg > 1:3319056/1‑140 (MQ=255) aTGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCtgttg > 1:5671870/1‑140 (MQ=255) aTAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATTATTCTGACGACATCTCTGTTGTGACaat > 1:5730553/1‑139 (MQ=255) aTAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTgac < 2:162218/120‑1 (MQ=255) aTAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAg > 2:4416697/1‑140 (MQ=255) aaTGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCgg < 2:1409117/140‑1 (MQ=255) aTGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGc < 2:1477600/140‑1 (MQ=255) tGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGAtt > 2:2276719/1‑109 (MQ=255) aaaTTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCgaga > 2:2519010/1‑140 (MQ=255) aTTCATAAAGGAGGAGATTGATATGAAAAGCATAGTTGGTGTATATGAAACTCCGCAGGAAACCATCGCAGCGATTGAAGGCTTACTTACAAAAGGCTATGATTCTGATGACATTTCTGTTGTGACAAGCCGGCGAGATa > 1:448918/1‑140 (MQ=255) aTTCATAAAGGAGGAGATTGATATGAAAAGCATAGTTGGTGTATATGAAACTCCGCAGGAAACCATCGCAGCGATTGAAGGCTTACTTACAAAAGGCTATGATTCTGATGACATTTCTGTTGTGACAAGCCGGCGAGATa > 1:4775672/1‑140 (MQ=255) aTTCATAAAGGAGGAGATTGATATGAAAAGCATAGTTGGTGTATATGAAACTCCGCAGGAAACCATCGCAGCGATTGAAGGCTTACTTACAAAAGGCTATGATTCTGATGACATTTCTGTTGTGACAAGCCGGCGAGATa > 1:987396/1‑140 (MQ=255) ggagATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTg > 1:1502375/1‑140 (MQ=255) ttAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAaca < 1:3749611/140‑1 (MQ=255) ttAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAaca < 1:1909044/140‑1 (MQ=255) atatGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGc > 1:2878638/1‑140 (MQ=255) atatGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGc > 1:5266508/1‑140 (MQ=255) tatGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGca > 1:2150757/1‑140 (MQ=255) atGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac < 1:3531849/140‑1 (MQ=255) atGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac < 1:115855/140‑1 (MQ=255) atGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac < 1:4619380/140‑1 (MQ=255) atGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac < 1:536746/140‑1 (MQ=255) gAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAg < 2:2017269/140‑1 (MQ=255) aaaGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGTCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGa > 2:810151/1‑140 (MQ=255) aaaGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGa > 2:1528166/1‑140 (MQ=255) aaaGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGa > 2:1353263/1‑140 (MQ=255) aaaGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGa > 1:2271675/1‑140 (MQ=255) aaaGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGa > 2:224251/1‑140 (MQ=255) aaGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGATTATTAACAAAAGTCTATGATTCTGACGACAACTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGaa < 2:456160/140‑1 (MQ=255) aGTATCGTTGTTGTATACGAAACGCCGCAACCAACCATTGGAGCGATTGAAGGCTTATTACCAAAAGGATATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAAc < 2:2935633/140‑1 (MQ=255) taGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGaa < 2:5357417/140‑1 (MQ=255) taGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGaa < 2:5671870/140‑1 (MQ=255) ggTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCaa > 1:7100/1‑140 (MQ=255) gtgtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAAt < 1:1003462/140‑1 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTCTGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGACCAGAAGTCAATcc > 1:679961/1‑139 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAAt > 2:714051/1‑138 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:2694017/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:2570847/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:2490130/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:312482/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 2:5231032/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:1898393/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:1842727/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:5574454/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 2:5717816/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCa > 1:1641569/1‑140 (MQ=255) gtATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTAATAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAACCACGCCCAGGAACTGAAGTCAATCa > 1:5142941/1‑140 (MQ=255) taCGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGACCAGAAGTCAATCAGGc > 1:3980173/1‑140 (MQ=255) taCGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGc > 1:3798438/1‑140 (MQ=255) taCGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGc > 1:2838338/1‑140 (MQ=255) gAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCAt < 2:417320/140‑1 (MQ=255) gAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCAt < 2:87716/140‑1 (MQ=255) aaCTCCGCAAGAAACCATTGCCGCCATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTCTCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTg > 1:4015975/1‑140 (MQ=255) aaCTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACCAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGACCAGAAGTCAATCAGGCCATTg > 2:5100421/1‑140 (MQ=255) aaCTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGa > 1:355673/1‑96 (MQ=255) aCTCCGCAAGAAACCATTGCAGCGATTGAAGGCGTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAATCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGa > 1:2800508/1‑140 (MQ=255) cTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGAt < 2:4084124/140‑1 (MQ=255) tCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac < 1:5686987/111‑1 (MQ=255) tCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac > 2:2818715/1‑111 (MQ=255) tCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac > 2:4724416/1‑111 (MQ=255) tCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATg > 2:5172834/1‑140 (MQ=255) tCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATg > 1:807299/1‑140 (MQ=255) tCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATg > 2:3605384/1‑140 (MQ=255) tCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATg > 2:1166498/1‑140 (MQ=255) cGCAGGAAACCATCGCAGCGATTGAAGGCTTACTTACAAAAGGCTATGATTCTGATGACATTTCTGTTGTGACAAGCCGGCGAGATACAGATTATTTGGAGTCACGTACAGGAACAGAAGTCAATCAAGCTATCGATg < 1:4116206/138‑1 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACg > 2:3509182/1‑106 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGcac > 2:5511654/1‑109 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGaa > 1:4911963/1‑119 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGaa < 2:4911963/119‑1 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGc < 2:3425805/130‑1 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCAt > 2:4632396/1‑133 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCAt > 2:1739878/1‑133 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCa > 1:886089/1‑140 (MQ=255) cGCAAGAAACCATTGCAGCGATTGAAGGCTGATTAACAAAAGGCTAAGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGACATTGATGCa > 1:5414058/1‑140 (MQ=255) cAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACg > 1:4074755/1‑140 (MQ=255) aTTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATGGATGCACGTGAGGGCgaatctgaatc > 1:215921/1‑140 (MQ=255) attaACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATg < 1:1701667/107‑1 (MQ=255) attaACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGACTCTGAATCTTTTTTCGATa > 2:4282970/1‑140 (MQ=255) attaACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGAATCTGAATCTTTTTTCGATa > 2:2126241/1‑140 (MQ=255) attaACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGAATCTGAATCTTTTTTCGATa > 1:3840880/1‑140 (MQ=255) attaACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGAATCTGAATCTTTTTTCGATa > 1:5069332/1‑140 (MQ=255) attaACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGAATCTGAATCTTTTTTCGATa > 2:3584474/1‑140 (MQ=255) attaACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGAATCTGAATCTTTTTTCGATa > 2:3894619/1‑140 (MQ=255) | TGTTTATTTTAAAGAGCATCGGGAATTACAAACGACATGAACGATAAAATGAAAATTGATAAAGGAGGAGATTAATATGAAAAGTATAGTTGGTGTATACGAAACTCCGCAAGAAACCATTGCAGCGATTGAAGGCTTATTAACAAAAGGCTATGATTCTGACGACATCTCTGTTGTGACAAGCCGGCGAGATACAGATTATCTTGAAACACGCACAGGAACAGAAGTCAATCAGGCCATTGATGCACGTGAGGGCGAATCTGAATCTTTTTTCGATA > NZ_CP034943/2709271‑2709548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |