| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 112,636 | G→T | 6.2% | R4I (AGA→ATA) | cysE → | serine O‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 112,636 | 0 | G | T | 6.2% | 1542.4 / 11.3 | 569 | R4I (AGA→ATA) | cysE | serine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (140/370); new base T (56/2); total (196/373) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.14e-26 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 571 total aligned reads displayed.
GGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAAT > NZ_CP034943/112497‑112773 | gagaGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGa < 1:859274/140‑1 (MQ=255) gagaGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGa < 1:292158/140‑1 (MQ=255) gagaGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTAGTGGGTGAAGAGGAAATCAAAGAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGa < 2:4578701/140‑1 (MQ=255) agCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATg < 2:642817/140‑1 (MQ=255) cAGAAGTCTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAAACAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCt > 2:869996/1‑140 (MQ=255) cAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAGGCATGTGTTTTTTAGAATGCt > 2:3317239/1‑140 (MQ=255) aaGTCTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGCAATCAAATAGAGAAGTGGGGGGAACCATGTGTTTTTTATAATGCTCaa > 2:4069686/1‑140 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:2793899/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:4934921/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAACCATGTGTTTGTTAGAATGCTCAaagaa < 1:4630307/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTGATTGGGTGAAGAGGAAAGCAAATAGAGCAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:3055811/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTCGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATAAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:1811797/140‑1 (MQ=255) tGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAAACAAATAGAGAAGTGGGGGGGAGCATGTGTTTGTTTTAATGCTCAaagaaa > 1:3858967/1‑139 (MQ=255) tGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑GTTTTTTATTTGGTGAAGAGGAAATCAAATAGAGAAGTTGGGGGACGCCGGTGTTTTTTTTAAATCTCAaagaag > 1:2722984/1‑140 (MQ=255) tGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑GTTTTTTATTGGGTGGAGGGGGAAACCAATAGAGAAGGGGGGGGGAGCATGTGTTTTTTTGTATTCTCAaagaag > 1:1927913/1‑140 (MQ=255) gCTTTTCAAACAGCGTGGAACCGCGCTGTGTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATACAGAAGGGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:5076668/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGGGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:4839007/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGGGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:2363702/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCTGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:2590946/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTCTTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:1134443/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:525860/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:3064496/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:3952146/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:5788285/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTAGTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:5428148/140‑1 (MQ=255) cTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGTAATCAAATCTAGAAGTGGGGGGAAGCATGTGTGTTTTAGAATGCTCAAACAAGAc > 2:1423663/1‑140 (MQ=255) ttCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACAtt < 2:5629422/140‑1 (MQ=255) tCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTg < 2:5693755/140‑1 (MQ=255) aaCAGAGTGTAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTAGTGGGTGAAGAGGATATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:2228762/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGACATCACATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:1077712/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:4372229/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:564014/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:642991/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:1663183/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:1721340/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:1820456/140‑1 (MQ=255) aCAGTGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTTATTGGGTGAAGAGGAAAACACATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:1015190/140‑1 (MQ=255) cAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACa < 2:2176580/140‑1 (MQ=255) agTGGAACCGCGCGGTTTAAGCGTCTCTGGCAAGATTTCATGCCCAGGCGC‑TGTTTGTAGTGTGTGAAAAAGACAACCAATATAGTAGAGGGGGGAAGCCTGTGTTATTTAGAAATATCAACTAAGACATAGATACAgtg > 2:5156386/1‑140 (MQ=255) gTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTTGGGGGATTGGAAATCAAATAAAGAAGTTGGGGGGAGCCAGGTTTTTTTATTATTCACAAATAACACAATtataaaaggt > 1:3775340/1‑134 (MQ=255) aaCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACATTGTTCGa > 2:3395366/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTTTTTGGTTAAGCGGTAATCAAATTGAGAAGTGGGGGGAAGCCTGTGTTTTTTATAATGCGACAAAAAGACAATGATAAAGTGTTGGATCAAg > 1:3647738/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTTGGTTTAAAGGAAAAAAAAAAAATAAGTTGGGGGAAGCAATTGTTTTTTTTAAATCTCAAAGAAAACAATTATAAAGTTGTAGATCAAg > 1:4704036/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGTAGAGGAAATCCAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTTGAATGCTCAAAGAAGACATTGATACCTTGTTCGATCaat > 2:4225705/1‑139 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGTAGAGGAAAAAAAAAATAGAACAGGGGGGGAGCAAGTGTTTTTTATTATTCTCAAACAATAAAATGTAAAAGTATTCGATCAAg > 1:3558201/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGACGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGGGTTTTTTAGAAACCTCAAAGAAGAAAGTGATACAGTGTTAGAACAAg > 2:3674277/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGGGGGGGGAAGCATGTGTTTTTTTTAATTCTCAAATAATAAATTTATAAAGTGTTCGATCAAg > 2:2089501/1‑140 (MQ=255) cgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGAt < 1:5378792/140‑1 (MQ=255) cGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAgcagca < 1:2023989/140‑1 (MQ=255) tctcTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaag < 1:772569/140‑1 (MQ=255) ctctGTCATGTTTTCATGCAGAGGCGC‑GTTTTTTTTTTGGGGGAGAGGGAATCCAATAGAGAAGTGGGGGGTAGCATGGGTTTTTTTTAATTGTGAAATTAGACATTGGTACAGTGTTAGATGAAGATCCAGCACCaaaa > 1:2152656/1‑138 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTTTTTGGTGAAGTGGAAATCAAATATAGAAGTGGGGGGAAGCAAGTGTTTTTTTGTATGGGCAAAAAAGACAATGATACAGTGTTCGATCAAGATCCAGCACCaagaa > 1:4488194/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTTGGGGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTTTTTTTTATAATGCTCAAAGAAGACAATTATACAGTGTTAGATAAAAATCCAGCAGCaagaa > 2:731808/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGTAGTGGGAATGAAATATATTAGTGGGGGGTAGCATTTGTTTTTTATAATTGTCAAATAATACATTTATACAGTGTTAGATAAATATAAAGCAGCaaaaa > 1:1257246/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGTAATCAAATAGAGAAGGGGGGGGCAGCAGGTGTTTTTTAGAATTCTCCAAGTAGACATTGGTTCAGTGTTGGGGCAAGTTCCAGCAGCcagac > 2:5542908/1‑139 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCCAATAGAGCAGTGGGGGGAAGCCTGTGTTTTTTAGAATTCTCCAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:820885/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGATAAGTGGGGGGAAGCATGTGTTTTTTATAATGCTCAAAGAAGACATTGATACAGTGTTAGATCAAGATGCAGCAGCaagaa > 2:3850402/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGACGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:3494311/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCCTGTGTTTTTTATAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:2706780/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa > 2:4463352/1‑100 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGGGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACAATGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:1617014/1‑140 (MQ=255) ctGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAAACCAATAGAGAAGTGGGGGGAAGCATGTCTTTTTTAGACTTCTCAAAGAAGACATTGATACAGTGTTGGATCAAGATCCAGCAGCaagaag < 1:3195905/140‑1 (MQ=255) tGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTATAATGCTCAAAGAAGACATTTTTACAGTGTTCGATCAAGATACAGCAGCAACAAGTTAttt > 2:1537240/1‑140 (MQ=255) ttttCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:341610/93‑1 (MQ=255) cAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGAtt < 1:4555497/140‑1 (MQ=255) agGCGC‑TTTTTTTATTGGGTGTAGAGGAAAAAAAATAGAGAATTGGGGGGAATCAGGTGTTTTTTAGAATTCTTAAATAAGACATTGAAAAATTTTTACAAAAATTAACACCAGCAACAACTTATTTTTAAGTGATTTTa > 2:3943689/1‑140 (MQ=255) gcgc‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAAc < 1:2415832/140‑1 (MQ=255) aTTGGGTGAAGAGGAAATCAAATAGAGCAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCGAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGtt < 1:5493732/140‑1 (MQ=255) tGGGTGAAGAGGAAATCAAATAGAGACGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 1:2838722/140‑1 (MQ=255) ggTGAAGAGGACATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:3213666/140‑1 (MQ=255) ggTGAAGAGGAACTCAACTAGAGCAGTGGGGGGAAGCATGTGTTTTTGAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:4159610/140‑1 (MQ=255) ggTGAAGAGGAACTCAACTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2080651/140‑1 (MQ=255) ggTGAAGAGGAAATCACATAGAGAAGTTGGGGGAAGCATGTGTTTTTTAGAATGCTCAAATAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:582186/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:3348841/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:5047957/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:1855086/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:4744681/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:1937506/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:4261451/140‑1 (MQ=255) ggTGAAGAGGAAATCAAATAGACAAGGGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:4020150/140‑1 (MQ=255) gAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGc < 1:5748101/140‑1 (MQ=255) agagGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCta > 1:4354084/1‑140 (MQ=255) aaaTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATgg > 2:414973/1‑140 (MQ=255) aTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATgg > 1:4418064/1‑138 (MQ=255) acaTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTCTTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCa < 2:4950963/138‑1 (MQ=255) aaaTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCa < 2:2820084/140‑1 (MQ=255) aTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATc > 1:1508737/1‑140 (MQ=255) gcgacgTGGCGCGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 1:4787462/135‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:1407386/140‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATCGGCGCATCGGATTGcac < 1:514247/140‑1 (MQ=255) tGGGGGGAACCATGTGTTTTTTAGAATGCTAAAAGAAGACATTGATACAGTTTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 2:2936304/140‑1 (MQ=255) ggggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATg < 2:2542275/140‑1 (MQ=255) ggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcaca < 2:3571916/136‑1 (MQ=255) ggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCt > 1:989687/1‑140 (MQ=255) ggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCt < 2:1257246/140‑1 (MQ=255) aaGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATGTTAACTTATTCAGGTTTACATGCTATATGTGCGCATCGGATTGCACATGCttt > 1:715159/1‑140 (MQ=255) cATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTtata > 2:1192163/1‑140 (MQ=255) gtgtTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGAATCAAGAAGTTATTTTGAAGTTATTTTAACTTATTCCGGTTTACATGATATATGGGCGCATCGGATTGCACATGCTTTATATaa > 2:3455609/1‑140 (MQ=255) tttttAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:5307177/97‑1 (MQ=255) ttttAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGaa < 1:3500836/140‑1 (MQ=255) | GGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAAT > NZ_CP034943/112497‑112773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |