| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 135,162 | C→A | 6.0% | intergenic (+209/‑29) | EO946_RS00715 → / → rpsJ | alpha/beta hydrolase/30S ribosomal protein S10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 135,162 | 0 | C | A | 6.0% | 1264.1 / 11.5 | 489 | intergenic (+209/‑29) | EO946_RS00715/rpsJ | alpha/beta hydrolase/30S ribosomal protein S10 |
| Reads supporting (aligned to +/- strand): ref base C (207/229); new base A (47/3); total (256/233) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.18e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 499 total aligned reads displayed.
AAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATCT > NZ_CP034943/135023‑135301 | tCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTGTCACGGAGAACTGTCTAACTTg > 2:4532934/1‑140 (MQ=255) tCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGGGAGAGGTTGCTGACACACCCGGCCGCGTTGCCAGGGCCAAGGTGTTCAGGTTTTTCTGACGGAGAACTATCTAAAttt > 1:3440203/1‑139 (MQ=255) gCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGt > 2:3500927/1‑140 (MQ=255) cATACGTCTATTTTCTGTAGAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAAGTGTCTAACTTGATGTAGGc < 1:5166017/140‑1 (MQ=255) aTACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCATGGCAAAGGTGTTAACGTTTTTCTCACGGAGAACTGTATAACTTGATGTAggag > 2:3034153/1‑138 (MQ=255) tACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGACCTGTCTAACGTGATGTAGGCGa > 2:5016074/1‑140 (MQ=255) tACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGa > 2:904118/1‑140 (MQ=255) tACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGa > 2:4892220/1‑140 (MQ=255) tACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCAGGGCCAAGGTGTTCAGGTTTTTCTCACGGTGAACTGTATAACTGGAGGTAGGGGa > 1:1275702/1‑140 (MQ=255) aCGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGaa < 1:3371039/140‑1 (MQ=255) aCGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGaa < 1:2237339/140‑1 (MQ=255) cTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAagg < 2:4110093/140‑1 (MQ=255) cTATTTTCTGTATAAGGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAagg < 1:2334270/140‑1 (MQ=255) tATTTTCTGTCTAATGGGGTATGTGGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGACGCTTTGCCTTGGCAAAGGTGTTCAGGTTTTTCTCAGGGTGAACTGTCTACCTTGTTGTAGGCGAAAagga < 2:5213563/140‑1 (MQ=255) tATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCCAGGCAAACGTTTTCAGGTTTTTCTAACGGAAAAATGTAAAAATTTATTTAGGCGAAAaaga > 1:4990143/1‑140 (MQ=255) tATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAagga < 2:1541586/140‑1 (MQ=255) tATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAagga < 2:505567/140‑1 (MQ=255) ttCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGTTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGa > 2:2445778/1‑140 (MQ=255) tGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGGCATGGCAAATGTGTTCAGGTTTTTATAACGGAGAACTGTCTAAATTTATTTAGGCGAAAAGGAGGGaaaa > 1:913689/1‑140 (MQ=255) tGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGaaaa > 2:2529550/1‑140 (MQ=255) tGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCAAGGAGAACTGTAAAACTTGATGTAGGCCAAAAGGAGTGaaaa > 2:2201303/1‑140 (MQ=255) tGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTAAGGTTTTTCTAACGGAGAAATGTCTAACTTGATGTAGTCGAAAAGTAGGGaaaa > 2:3433034/1‑140 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCATGGGAAAGGTGTTCAGGTTTTTGTCAAGGAGAACGGTGTAAAATGATTTTGGCGAAAATGAGGGcaaaaa > 1:3236199/1‑138 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCATGGCAAAGGTGTTCAGGTTTTTATCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAaata > 2:2081045/1‑140 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTATCACGGAGAACTGTCTAACTTGATTTAGGCGAAAAGTAGGGAAaata > 2:3185609/1‑140 (MQ=255) gtgtATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGcaa < 1:1023365/140‑1 (MQ=255) tgtATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGGCATGGCAAAGGTGTTAAGGTTTTTTTCACGGAGAACAGTCTAAAATTATGTAGGCGAAAAGGCTGGAAAAAAATTGaaaa > 1:1639859/1‑140 (MQ=255) tgtATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCCTGGCAAAGGTGGTGAGGTTTTTCTGACGGAGAACTTTCTAACTTGATTTATGCGAAAAGGAGGGAAAATAAAGTcaaa > 1:270832/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTGCAGGGCCAAAGTGTTCAGGTTTTTATAAACGATAAATGTCTAAATTGATGTAGGCGAAAAGGAGGGAAAATAAATGcaaaaa > 1:2111613/1‑139 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATTTAGGCGAAAAGGACGGAAAATAATGGcaaaac > 2:2163214/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGcaaaac > 2:4664218/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAAATGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGcaaaaa > 2:1994284/1‑139 (MQ=255) tGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACaaaaa < 1:3155374/140‑1 (MQ=255) tGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACaaaaa < 1:5656908/140‑1 (MQ=255) tGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCAGGGCAATGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACaaaaa < 1:1150038/140‑1 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTGCATGGCCAACGTGTTGAGGTTTTTTTAACGGGGAACTGTCTAAATTGATTTATGGGAAAAGGAGGGAAAATAATGTCAAAAAAAAAAat > 1:4814285/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCCGTGCAAAGGTGTTCATGTTTTTTTAACGGCCAACTCTCTAAATTGATGTAGGGGCAAAGGATGGCAAAAAAAATCAaaaaaaaaaaa > 1:5345076/1‑139 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTGTCACGGAGAACTGGATAAATTGATTTAGGCGAAAAGGAGGGAAAATAATGGCAAAAAAAAAAat > 1:2003682/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATg < 1:4424125/101‑1 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATg > 2:4424125/1‑101 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATTTAGGCGAAAAGGAGGGAAAATAAAGGCAAAAAAAAAAat > 2:2033432/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTGTGCCAGGGCCAAAGTGTTGAGGTTTTTTTCAAGGCGAAATGTGTAAGTTGGTTGTGGCGAAAAGGAGGGGAGATAATGGGAAAACaaaaaaa > 1:474533/1‑139 (MQ=255) tCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAatt > 2:3260905/1‑140 (MQ=255) tttGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAattag > 2:2734053/1‑138 (MQ=255) tttGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTAAGGTTTTTCTCACCGAGAACATTCAAAATTTATTTAGGCGAAAAGGAGGGAAAAAAAATGCAAAACAAAAAattat > 2:2915861/1‑138 (MQ=255) tGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTGCATGGCAAAAGTGTTTAGGTTTTTGTGACGGAGAAAAGTCTAAAATGTTTTATGCGGAAAGGAGGGAAAATAATGGCAAAAAAAAAAaatcgta > 1:782128/1‑140 (MQ=255) tGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACAGTCTAACTTGATGTATGCGAAAAGGAGGGCAAATAATGGCAAAACAAAAAattagta > 1:3047292/1‑140 (MQ=255) tGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCATGTTTTTCTCACGGAGAACTGTCTAACTTTGTTTAAGAGAAAAGGAGGGAAAATAAAGTCAAAACAAAAAatttgta > 2:4637847/1‑140 (MQ=255) tGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTTATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAattagta > 2:5357569/1‑140 (MQ=255) tGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGGGTTCAGGTTTTTCTCACGGAGAACAGTCTAACTTGATGTAGGCGAAACGGAGGGAAAATAATGGCAAAACAAAAAattcgta > 2:3805061/1‑140 (MQ=255) gCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTAACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAattcgtattcgt > 2:5274319/1‑140 (MQ=255) cGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAAAAAAAAATTAGTATTCGtt > 2:3575816/1‑140 (MQ=255) cGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCAGGGCAAAGGTGTTGAGGTTTTTGTAACGGAGAACTGTCTAACTTGATTTAGGGGAAAAGGAGGGAAAAAAATGGCAAAACAAAAAAAACGTATTCGtt > 1:4652010/1‑140 (MQ=255) cGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCAAGGCAAAGGTGTTCAGGTTTTTATGACGGGGAACAGTCAACCTTGATGTCGGCGAAAACGAGGGACAATACAGGCAAAACAAAACATTCGTAATCGtt > 1:2952316/1‑140 (MQ=255) tGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGa < 2:3989501/140‑1 (MQ=255) agagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCata < 1:1739803/140‑1 (MQ=255) agagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCata > 2:4328623/1‑140 (MQ=255) agagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCata < 2:2599509/140‑1 (MQ=255) gCTGACACACCCGGCCGCTTTGCCATGGGAAACGTGTTCAGGTTTTTATCCCCGAGAACAGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAAATCGGATTCGTTTTAAAGCATATTATCAt > 1:2582019/1‑140 (MQ=255) cTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTGTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATa < 2:2357885/140‑1 (MQ=255) tGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAg < 2:66529/140‑1 (MQ=255) cacCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATcc < 2:5398600/140‑1 (MQ=255) cGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTATTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGa < 1:5493158/140‑1 (MQ=255) cGGACGCTTTGCCATGGCAAATGTGTTAAGGTTTTTCTCACGGAGAACTTTATAACTTCATGTAGGCGAAAAGGATGGAAAATAATGGCAAAAAAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGa < 2:5487579/140‑1 (MQ=255) gCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATc < 2:1391963/140‑1 (MQ=255) ccGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCa < 1:4532226/140‑1 (MQ=255) ccGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCa < 1:4328623/140‑1 (MQ=255) gCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAAt < 1:1211509/140‑1 (MQ=255) tttGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCt > 2:1269589/1‑140 (MQ=255) gCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCa < 1:707490/140‑1 (MQ=255) tGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAgaga > 1:2197251/1‑140 (MQ=255) cAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGagaaga > 2:3100640/1‑140 (MQ=255) ggTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGAttgt > 1:3886569/1‑140 (MQ=255) gtTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCACTCTGCAGAGAAGATTGTTGa > 1:5712042/1‑140 (MQ=255) gtTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGa < 2:1121842/140‑1 (MQ=255) ttCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGaa > 1:3957443/1‑140 (MQ=255) ttCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGaa > 2:1642201/1‑140 (MQ=255) tttttCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCa < 2:1813130/140‑1 (MQ=255) tttgtCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCACACCAAAAAATTCGTCTTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCa < 1:4249527/140‑1 (MQ=255) tttCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCaaa < 1:1425335/140‑1 (MQ=255) tctcACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAAc > 1:4079085/1‑140 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 2:5701391/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:3593237/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:156770/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:5224801/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:3500927/140‑1 (MQ=255) cGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCt > 1:2068500/1‑140 (MQ=255) agaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGt < 2:773785/140‑1 (MQ=255) agaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGGTCTGGt < 1:2917169/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 2:4702565/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 2:1880560/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 1:5453637/140‑1 (MQ=255) tGTCTAACTTGAGGGAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAg < 2:4452434/140‑1 (MQ=255) gTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAgt < 2:1498328/140‑1 (MQ=255) gTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAgt < 1:5274319/140‑1 (MQ=255) gTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAgt < 2:2987430/140‑1 (MQ=255) tCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAgtg > 1:1910517/1‑140 (MQ=255) aCTTGATGGAGGCGAAAAGGATGGAAAATAATGTCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATc < 2:3341367/140‑1 (MQ=255) cTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATCt > 1:2422330/1‑140 (MQ=255) cTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATCt > 1:3770936/1‑140 (MQ=255) | AAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATCT > NZ_CP034943/135023‑135301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |