New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 607149	228 (1.390)	7 (0.050) +TGCCGGGAGTCATG	5/242	7.6	3.1%	intergenic (+515/‑9)	EO946_RS03180/EO946_RS03185	glycosyltransferase/collagen‑like protein
	?	NZ_CP034943	607794 =	262 (1.600)					coding (637/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/607105‑607149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT  >  NZ_CP034943/607794‑607890                                              ||||||||||||||                                                                                                  CACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGG                  >  2:1414760/1‑140     AGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTAT              <  1:1414760/140‑1                 agctacAGGACAACCAGGACCAGACGGAGTGCCGGGAGACATGGGAGCGACAGGTGCTGCCGGAGAAGCCGGACCACCCGGAGCGACTGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT  <  2:760057/134‑1                                     CACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGG                            <  1:2226815/94‑1                                     CACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGG                            >  2:2226815/1‑94                                       CAAGGACTGCCGGGAGTCATGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCC                                                               >  1:548862/1‑57                                       CAAGGACTGCCGGGAGTCATGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCC                                                               <  2:548862/57‑1                                               GCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGG                                           >  1:2484170/1‑69                                               GCCGGGAGTCAGGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGG                                           <  2:2484170/69‑1                                              ||||||||||||||                                                                                                  CACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/607105‑607149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT  >  NZ_CP034943/607794‑607890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.