| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 607256 | 225 (1.380) | 3 (0.020) | 3/264 | 9.2 | 1.5% | coding (99/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607482 = | 167 (1.040) | coding (325/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607116‑607256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA > NZ_CP034943/607482‑607620 CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACCGGAGCTACCGGGGAACCCGGACCAGCCGGGGCGACAGGAGCCCCGGGAGCTCCGGGGGAAGCTGGACCAGCCGG > 1:969031/1‑140CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACGGGAGCTCCGGGGGAAGCTGGACCAGCCGG > 2:1921586/1‑140 CCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACGGGAGCAAGTGGGGAAGGAGGACCAGCCGGAGCGCCCGGAGCTAC > 2:644105/1‑140 CAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGG > 2:1000999/1‑140 AAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGG < 1:1000999/140‑1 AGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCAACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA > 2:1297317/1‑140 AGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGA > 1:2156800/1‑37 CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607116‑607256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTA > NZ_CP034943/607482‑607620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |