BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 607355	183 (1.120)	9 (0.060)	4/260	8.5	4.4%	coding (198/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	607752 =	218 (1.390)	9 (0.060)	4/260	8.5	4.4%	coding (595/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 246 total aligned reads displayed.

AGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTA  >  NZ_CP034943/607613‑607891

     ctcccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACg                                                                                                                                        <  1:2088684/137‑1 (MQ=255)

      tACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACgg                                                                                                                                       <  1:1961806/140‑1 (MQ=255)

       cccGGCGAACCCGGAGCCCCCGGCGCGACAGGAGCTACCGTGGAACCCGGACCAACCGGAGCGACAGGAGCTTCCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                                                                                      <  1:2167816/139‑1 (MQ=14)

       aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                                                                                      <  1:2363582/140‑1 (MQ=255)

             ccaGCCGCACCAGCCGGAGCGACATGAGCTACCGGGGAAGCCGGTCGAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                                                                                                <  2:1761629/138‑1 (MQ=14)

                cccGGACCAGCCGGAGCCCCCGGAGCTACCGGCGAATCCGGACCTACCGGAGCGACAGGAGCTACCGGTGAAGCCGGACCACGCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                                                                                             <  1:799993/139‑1 (MQ=14)

                          ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                                                                                                                   >  1:2281946/1‑140 (MQ=255)

                              aGCGACAGGAGCTACGGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                                                                                               <  1:369813/140‑1 (MQ=255)

                                   cAGGCGCTCCCGGGGCAGCCCGACCCCCCGGACCCACAGGCGCTCGCGGCGCAGCGGTAGCAGACGGAGCGACAGGAGCGACCGGTGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGa                                                                                                          <  1:2418943/140‑1 (MQ=12)

                                   cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAGCCGGAGCGACCGGAGCGACCGGCGCCGCCGGAGAACCCGGACCCACGGGAGCCACAGCGGCACCTGGGGAAGGCGGa                                                                                                          >  2:890938/1‑140 (MQ=14)

                                    aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                                                                                                                   <  1:1450054/130‑1 (MQ=255)

                                    aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                                                                                                         >  2:1656042/1‑140 (MQ=255)

                                           aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGCAGCGACCGGAGCTACCGGGGAACCCGGGCCACGCGGAGCGACGGTAGCCAGGTGGTCGACTGGGGACGGCGGAGCAGGCga                                                                                                  >  2:1131672/1‑139 (MQ=14)

                                           aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGACCCCGGAACAGCCGCCGCGCCAGGAGCGACCGGCGAAGCCGGCCCAACCGGAGCCGCGGGAGCCCCAGGGCCTACGGCGGACGGCGGACCAGCCgg                                                                                                  >  2:721219/1‑140 (MQ=17)

                                                 gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAc                                                                                            <  1:115836/140‑1 (MQ=255)

                                                 gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACAAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAc                                                                                            >  2:2169443/1‑140 (MQ=255)

                                                     ccGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGa                                                                                        >  2:1634382/1‑140 (MQ=255)

                                                              cgggAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                               >  1:1690547/3‑140 (MQ=18)

                                                              ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                               <  1:1297317/140‑1 (MQ=255)

                                                              ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                               <  1:611195/140‑1 (MQ=255)

                                                               cGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACGGGGGACGTCGGACCAGCCGGAGCGACAGGAGCGACAgggg                                                                              >  2:1273411/1‑140 (MQ=255)

                                                                      aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                       >  2:91967/1‑140 (MQ=255)

                                                                       cAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                      >  1:1775577/1‑140 (MQ=255)

                                                                        aGGCGCTCCTGGGGACCCCGGACCAGCGGGACCCACAGGAGCTCCCGGGGCAGAGGGTCCAACCGGAGCGACGGGAGCCACAGGCGCTACCGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                     <  1:2102495/140‑1 (MQ=17)

                                                                        aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                                                                                                >  2:1007191/1‑81 (MQ=38)

                                                                        aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                                                                                                <  1:1007191/81‑1 (MQ=38)

                                                                            gCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                                                 >  2:2423374/1‑140 (MQ=255)

                                                                             cTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGTGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCTGACCAAcc                                                                >  1:455602/1‑140 (MQ=18)

                                                                             cTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                >  2:122903/1‑140 (MQ=255)

                                                                               actggggACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                              >  1:557210/4‑140 (MQ=255)

                                                                               actggggACGGCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGCCGGGAGCCCCAGGGGCGACTGGGGCCGTCGGACCAGCCGGAGCGACAGGCGCTACCGGCGCAGCCGGACGAACCgg                                                              >  1:297349/4‑140 (MQ=17)

                                                                               aCCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGAGGTCGGACCAGCCGGAGCGCCCGGAGCTACCGGGGAAGCCGGACCAACCgg                                                              >  1:2115163/1‑140 (MQ=255)

                                                                               aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                              >  2:83567/1‑140 (MQ=255)

                                                                               aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                              >  2:1509925/1‑140 (MQ=255)

                                                                               aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAATCCGGAACAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGTCAGGAGCTACCGGGGAAGCCGGAGCAACAgg                                                              >  1:563079/1‑140 (MQ=18)

                                                                                 cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCCACCGGGGACACAGGGCCAGGCGGACCGACCGGAGCTACAGGAGCAGCCGGGGAAACCGGACCAACCGGAg                                                            >  2:1282055/1‑140 (MQ=11)

                                                                                  ggggACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGc                                                           >  1:603135/1‑140 (MQ=255)

                                                                                    ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGa                                                         <  1:1263436/140‑1 (MQ=255)

                                                                                    ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa                                                         >  1:845594/1‑140 (MQ=255)

                                                                                    cgacgCCGGCCCAGCCGGACCCCCCGGAGCTACCGGGGAAGCCGGCCCACCCGGAGCCACGGGAGCCCCAGGCGCTACCGGGGACGCCGGAACAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa                                                         <  1:2504294/136‑1 (MQ=11)

                                                                                     gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGAc                                                        >  2:2382126/1‑140 (MQ=255)

                                                                                        gtcGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                     <  2:603135/138‑1 (MQ=255)

                                                                                        gtcGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                     >  2:295109/3‑140 (MQ=255)

                                                                                        gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                     <  2:530609/140‑1 (MQ=255)

                                                                                        gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                     >  2:752877/1‑140 (MQ=255)

                                                                                          cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGTGCGACAGGGAACGTCGCACCAGCCGGAGCGACAGTAGCTACAGGGGAAGCCGGACAAACAGCAGAGACAGGAg                                                   >  2:55670/1‑140 (MQ=17)

                                                                                          cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACa                                                                                           <  1:403270/100‑1 (MQ=255)

                                                                                             aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                                                                                             >  1:902331/1‑63 (MQ=40)

                                                                                               cacccGGAGCCACAGGAGCGACCGGCGAAGCCGGACCAACCGGCCCGACGGGAGCCACAGGGGCTACTGGGGAAGGAGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACGGGAGCCAca                                              <  1:2208692/137‑2 (MQ=11)

                                                                                               cAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCAca                                              <  2:2090864/140‑2 (MQ=255)

                                                                                                 gCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCTACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACagg                                            <  1:491009/140‑1 (MQ=14)

                                                                                                 gCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACggg                                            >  2:339762/1‑140 (MQ=255)

                                                                                                  ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                                                                                      <  2:1367159/49‑1 (MQ=38)

                                                                                                  ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACcggg                                           >  2:1877162/1‑139 (MQ=255)

                                                                                                  ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGa                                           >  2:1988740/1‑140 (MQ=255)

                                                                                                  ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGa                                           >  1:349997/1‑140 (MQ=255)

                                                                                                      cgCGACTGGAGCCACCGGGGCTCCCGGCGCAGCCGGAGCGCCTGGAGCCACCGGCGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCca                                       <  1:507571/139‑1 (MQ=14)

                                                                                                      aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGcta                                       >  2:1092209/1‑138 (MQ=255)

                                                                                                      aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCca                                       >  2:1055390/1‑140 (MQ=255)

                                                                                                       gCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcac                                      <  1:1647928/140‑1 (MQ=255)

                                                                                                        cgacccgAGCTACCGGGTACTCCGGTCCAACAGCTGCGACGTCAGCCACAGGGGCTACGGGGGACGCCGCACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcaca                                     <  2:2057746/134‑1 (MQ=17)

                                                                                                        cGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcaca                                     <  2:855388/140‑1 (MQ=255)

                                                                                                        cGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcaca                                     <  2:1862172/140‑1 (MQ=255)

                                                                                                          actggAGCTACCGGGGAAGCGGTAACAACCGGAGCGACGGGAGACACCGGGGCTACTGGGTACGTCGGAACATCAGTAGCCAAAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacagg                                   <  1:681545/137‑1 (MQ=18)

                                                                                                           cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                                                                                             <  1:676175/49‑1 (MQ=255)

                                                                                                           cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCtactggc                                  >  1:1214039/1‑140 (MQ=14)

                                                                                                            aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCCACGGGAGCcacaggca                                 >  2:1406339/1‑140 (MQ=255)

                                                                                                                gCTACCGGGGACGCGGGACCAGCGGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacaggcacagg                             <  2:402574/140‑1 (MQ=255)

                                                                                                                gCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                                                                                      <  2:2481792/35‑1 (MQ=40)

                                                                                                                gCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                             <  2:677547/108‑1 (MQ=255)

                                                                                                                gCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacaggcacagg                             <  2:1690547/140‑1 (MQ=255)

                                                                                                                gCTACCGGCGAACCCGGACCAACCGGAGCGACGGGTGCCACCGGGGCTACGGGTGAAGTCGGAGCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacaggcacagg                             <  1:1667246/140‑1 (MQ=18)

                                                                                                                 cTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                                                                                               >  2:1549922/1‑41 (MQ=40)

                                                                                                                 cTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                                                                                               <  1:1549922/41‑1 (MQ=40)

                                                                                                                   aCCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGagc                          >  1:883878/1‑140 (MQ=255)

                                                                                                                        ggAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAcg                                                       >  2:2007661/1‑105 (MQ=255)

                                                                                                                        ggAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACa                                                       <  1:2007661/106‑1 (MQ=255)

                                                                                                                         gAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAcg                                                       <  1:842558/105‑2 (MQ=255)

                                                                                                                         gAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAcg                                                       >  2:842558/1‑104 (MQ=255)

                                                                                                                           ccccGGACCCACCGGCGCGAGGGGAGCCTCAGGGGCGTCTCGGGAAGGCGGACCAGCCCCAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGt                  <  1:1836028/138‑1 (MQ=21)

                                                                                                                           aGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGAAGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGt                  <  1:1475584/140‑1 (MQ=255)

                                                                                                                            gCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGa                                           <  2:2229716/114‑1 (MQ=255)

                                                                                                                              cGGACCAACCGGAGCGACGGGAGCCACCGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTAt               <  1:95350/140‑1 (MQ=255)

                                                                                                                              cGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACagggg                                          >  1:1201505/1‑111 (MQ=255)

                                                                                                                              cGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTAt               >  1:358521/1‑140 (MQ=255)

                                                                                                                                 aCCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCg            >  1:2245901/1‑140 (MQ=255)

                                                                                                                                 aCCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCg            >  2:415283/1‑140 (MQ=255)

                                                                                                                                 aCCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCg            >  2:654625/1‑140 (MQ=255)

                                                                                                                                   cccacgtaGCGACGGGAGCGACAGGGGCTACTGGGGACGTCGGACCAGCCGGCGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGaa          <  1:136828/133‑1 (MQ=25)

                                                                                                                                   cacccGGAGCGACGGGAGCCACCGGGGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGTTTATCCGaa          <  1:1601/137‑1 (MQ=21)

                                                                                                                                   cAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGaa          <  1:83567/140‑1 (MQ=255)

                                                                                                                                   cAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGaa          <  1:1509925/140‑1 (MQ=255)

                                                                                                                                     tcgggAGCGTCGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa        <  1:317/137‑1 (MQ=255)

                                                                                                                                     aCCGGAGCGACGGGAGCCACAGGGTCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa        <  1:2059624/140‑1 (MQ=255)

                                                                                                                                     aCCGGAGCGACGGGAGCAACCGGGGCTCCTGGCGCAGTCGGACCCGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa        <  1:2349787/140‑1 (MQ=21)

                                                                                                                                      ccGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATAc       >  2:854524/1‑140 (MQ=255)

                                                                                                                                       cGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACg      <  1:975320/140‑1 (MQ=255)

                                                                                                                                          aGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt   <  1:740772/140‑1 (MQ=255)

                                                                                                                                          aGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt   <  1:1082839/140‑1 (MQ=255)

                                                                                                                                          aGCCACGGGAGCCACAGGGGCTACGGGGGACGTCGGCCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATCCGGGt   <  1:1038280/140‑1 (MQ=255)

AGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTA  >  NZ_CP034943/607613‑607891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.