Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943240,1980GT24.1% 314.2 / 30.8 170Q112K (CAA→AAA) EO946_RS01360hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (45/84);  new base T (41/0);  total (86/84)
Fisher's exact test for biased strand distribution p-value = 1.76e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 174 total aligned reads displayed.

GTGGAGAAGGTGTAAGAGAGAGAGAAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAATAGAGTTACTAAT  >  NZ_CP034943/240059‑240337
                                                                                                                                           |                                                                                                                                           
gtggAGAAGGTGTAAGAGAGAGAGAAGGAGCATCTCTGATGGTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTg                                                                                                                                             >  2:1757563/1‑140 (MQ=255)
 tggAGAAGGTGTAAGAGAGAGAGAAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTgg                                                                                                                                            <  2:1971681/140‑1 (MQ=255)
        ggTGTAAGAGAGAGAGAAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGGTTTTTTTTTTTAGTTTTTGGAGAttt                                                                                                                                     >  1:859695/1‑140 (MQ=255)
                  agagagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTTTTTTAAGTTTTTGGAGATTTGAATTGCttt                                                                                                                           >  1:598261/1‑140 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTTTTTGAATTTTTGGGAGATTTGAATGGCTTTTc                                                                                                                         >  1:2375656/1‑140 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTTAAGTTTTTGGAGATTTTAATTGCttttg                                                                                                                         >  1:2389557/1‑139 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTGAATTGCtttta                                                                                                                         >  2:980151/1‑139 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTGAATGGCTTTTc                                                                                                                         >  2:1398034/1‑140 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTc                                                                                                                         >  1:1848247/1‑140 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTAGGATTTTTTTTTTAAGTTTTTGGAGATTTTAATTGCtttta                                                                                                                         >  1:141324/1‑139 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTAGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTc                                                                                                                         >  2:832345/1‑140 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTGTTCGGATTTTTGTTTTAATTTTTGGGAGATTTGAATGGGTTTTc                                                                                                                         >  1:1216878/1‑140 (MQ=255)
                    agagaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGGTTTGGGATTTTTTTTTGAACTTTTGGGAGATTTGAATGGCttttg                                                                                                                         >  1:821045/1‑139 (MQ=255)
                      agaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGTGATTTTAAAGGCTTTTcct                                                                                                                       >  2:208997/1‑139 (MQ=255)
                      agaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTGTTCGGATTTTTGTTTTAAGTTTTTGGAGATTTGAATGGGTTTTACg                                                                                                                       >  1:343199/1‑140 (MQ=255)
                      agaAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTGTTCGGAATTTTGTTTGAAGTTTTGGGAGATTTGTATTGCGTTTGCg                                                                                                                       >  1:1273024/1‑140 (MQ=255)
                          ggAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTTAATGGCTTTTCCGtttt                                                                                                                   >  1:1732938/1‑140 (MQ=255)
                           gAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACTGGCGTTTTCGGATTTTTGTTTTAAGTTTTGGGATATTTTAATGTCTTTTAAGttttt                                                                                                                  >  2:2508456/1‑140 (MQ=255)
                           gAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGttttt                                                                                                                  <  2:1679592/140‑1 (MQ=255)
                              cATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTGTTCGGATTTTTGTTTTAAGTTTTTGGAGATTTTAATTGCTTTTACGTTTTTaaa                                                                                                               >  1:2064483/1‑140 (MQ=255)
                                tctcTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAAc                                                                                                             >  2:381803/1‑140 (MQ=255)
                                tctcTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTAGGATTTTTTTTTTAAGTTTTTGGAGATTTGAATGTGTTTTGAGTTTTTaaaaa                                                                                                             >  1:1050847/1‑139 (MQ=255)
                                 ctctGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACa                                                                                                            <  1:2399395/140‑1 (MQ=255)
                                 ctctGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACa                                                                                                            >  2:516963/1‑140 (MQ=255)
                                      aTGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTGAATTGCTTTTCCGTTTTTAAAAAAAGAgg                                                                                                       >  2:25615/1‑140 (MQ=255)
                                      aTGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAgg                                                                                                       >  2:864125/1‑140 (MQ=255)
                                      aTGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTGTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAgg                                                                                                       >  2:2313786/1‑140 (MQ=255)
                                         ttGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCaa                                                                                                    >  2:1241095/1‑140 (MQ=255)
                                          tGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAg                                                                                                   <  1:1635782/140‑1 (MQ=255)
                                           ggAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTGAATGGGTTTTCCGTTTTTAAAACAAGAGGCaacc                                                                                                  >  1:1554273/1‑138 (MQ=255)
                                           ggAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGc                                                                                                  >  2:496375/1‑140 (MQ=255)
                                                tattCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGAt                                                                                             >  2:803884/1‑140 (MQ=255)
                                                 attCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATa                                                                                            <  2:1370567/140‑1 (MQ=255)
                                                  ttCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAAAAATAGGCAATCCAGATaa                                                                                           >  2:2385110/1‑140 (MQ=255)
                                                  ttCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATAAGGGCGTTTTCGGATTTTTGTTTGAATTTTTGTGAGAGTTGAATGGCATTTCCGTGTTTAAAACAACAGGCAAGCCAGATaa                                                                                           >  2:43524/1‑140 (MQ=255)
                                                       agaTGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGCTTTTTGTTTGAAGTTTTGGGATATTTGAATGGCTTTTCCGTTTTTATAACAACAGGCAATCCAGATATACCCg                                                                                      >  1:1652722/1‑140 (MQ=255)
                                                        gaTGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGTATTTTTTTTTTAAGTTTTTGGAGAATTTTATGGCTTTTCAGTTTTTAAAACAATAAGCAACACAAATaaaaacga                                                                                     >  1:1984501/1‑135 (MQ=255)
                                                           gcagTTTGTGTATGTTTGGTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTACAACAAGAGGCAAGCCAGATAAACCCGacaa                                                                                  <  1:903582/137‑1 (MQ=255)
                                                           gCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGacaa                                                                                  <  1:2385110/140‑1 (MQ=255)
                                                           gCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGacaa                                                                                  <  1:2366620/140‑1 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTGGGATTTTTTTTTTTAGTTTTTGGAGATTTGTATTGGTTTTTCGTTTTTTTAAAAAGAGGCAAAGCAGATAAACACGacaac                                                                                 >  1:2203197/1‑140 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCTGTTTTTTTTTTTAAGTTTTTGGAGATTTGAATGGCTTTTACGTTTTTAAAAAAAGAGGCAAGCCCGATAAAACCGacaaa                                                                                 >  1:282578/1‑139 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTTTTTTAAATTTTTGGAGATTTGAATTGCATTTCCCTTTTTAAAAAAAGAGGCAAGCCAGATAAACCCCacaaa                                                                                 >  1:433886/1‑139 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTGAATTGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGacaac                                                                                 >  2:1066472/1‑140 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAAACCGacaac                                                                                 >  2:1496812/1‑140 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGaa                                                                                                                                  <  1:1479638/91‑1 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGacaac                                                                                 >  2:1630514/1‑140 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGacaa                                                                                  <  1:1539171/139‑1 (MQ=255)
                                                            cTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGacaa                                                                                  >  2:1539171/1‑139 (MQ=255)
                                                               tttttGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTTTTTTTAGTTTTTGGAGATTTTAATGGCTTTTGCGTTTTTAAAACACGAGGCCACCCACAGAAACCCCaccccaac                                                                              >  1:17640/1‑140 (MQ=255)
                                                               tttttGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTTAATTGCTTTTCCGTTTTTAAAAAAATAGGCAACCCAGATAAACCCCacaacaaa                                                                              >  1:97403/1‑139 (MQ=255)
                                                               tttttGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTTAATGGCTTTTCCGTTTTTTAAAAAATAGGCAAGCCAGATAAACCCGacaacaac                                                                              >  1:2336963/1‑140 (MQ=255)
                                                                         tttGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTAGAAGTTTTGGGAGATTTGAATGGCTGTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAaataat                                                                    <  1:119968/140‑1 (MQ=255)
                                                                         tgtGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAaataat                                                                    <  1:2115504/138‑1 (MQ=255)
                                                                             ttCTAATACGAAGTCTATCATTCCGACTATACGGGCGTTTTCGTATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAg                                                                <  1:1830582/140‑1 (MQ=255)
                                                                             ttCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAg                                                                <  2:2204860/140‑1 (MQ=255)
                                                                             ttCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAg                                                                <  1:508050/140‑1 (MQ=255)
                                                                             ttCTAATACGAAGTCGATCATGCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAg                                                                <  1:2302647/140‑1 (MQ=255)
                                                                             gtctcATACGAAGGCGATCAGTCCGACTATACGGGCGTTTTCGGATGTTTGTTTGAAGTTTTGGGAGATTTGAAGGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAg                                                                <  2:1847656/139‑1 (MQ=255)
                                                                               cTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTTTAGTTTTTGGGGATTTTAATGGGTTTTGCGTTTTTTAAACAACAGGCCAGCCCGATAAAACCGACAACAACAAAAAAAAATATAgaa                                                              >  1:1818634/1‑138 (MQ=255)
                                                                               cTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCa                                                              <  2:1111103/140‑1 (MQ=255)
                                                                                tAAGACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCaa                                                             <  2:2088019/140‑1 (MQ=255)
                                                                                  aTACGAAGTCGATCATTCCGACTATACGGGCTTTTTCTTATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGATTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGt                                                           <  2:1775183/140‑1 (MQ=255)
                                                                                  aTACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGt                                                           <  2:277694/140‑1 (MQ=255)
                                                                                    aCGAAGTCGATCATTCCGACTATCAGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTaa                                                         <  1:1977925/140‑1 (MQ=255)
                                                                                    aCGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTGTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTaa                                                         <  1:1757563/140‑1 (MQ=255)
                                                                                     cGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTaaa                                                        <  1:381803/140‑1 (MQ=255)
                                                                                       aaGTCGATCATTCCGACTATACGGGCGTGTTCGGATTTTTGTTTGAAGTTTTTGGAGGTTTTTATGGGTTTTCCGTTTTTAAAAAAAGAGGCAACCCACATAAAACCCACCACAAAAAAAAATAAACAATCAACTAAAca                                                      >  1:968560/1‑139 (MQ=255)
                                                                                        aGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTc                                                     <  2:489427/140‑1 (MQ=255)
                                                                                        aGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTc                                                     <  2:1984501/140‑1 (MQ=255)
                                                                                        aGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTc                                                     <  2:1181390/140‑1 (MQ=255)
                                                                                        aGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTc                                                     <  1:321980/140‑1 (MQ=255)
                                                                                         gTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTcc                                                    <  1:212372/140‑1 (MQ=255)
                                                                                         gTCGATCATTCCGACTATACGGGAGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTcc                                                    <  1:25615/140‑1 (MQ=255)
                                                                                          tCGATCATTCCGACTATACGGGCGTGTTCGGATTTTTGTTTGAATTTTTGGGAGAGTTGAATGGGTTTTACGTTTTTAAAACAAGAGGCAAGCCAGATAAAACCGCCAACAACAAAAAATAATCTAGCAAGTAAACAccc                                                   >  2:1896198/1‑139 (MQ=255)
                                                                                             aTCATTCCGACTATACGGGGGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGGTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgc                                                >  2:2187944/1‑140 (MQ=255)
                                                                                             aTCATTCCGACTATACGGGCGTTTTCGGCTTTTTGTTTTTACATTTGGGATATTTGAATGGGTGTTAAGGTTTTAAAAAAAAAGGGAATCCAGAAAAACCCGACAAAAACAAAAAAAAAAATAACAAGTAAAATCcaaga                                                >  2:1149815/1‑137 (MQ=255)
                                                                                              tCATTCCGACTATACGTGCGTTTTCTGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCAGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgca                                               <  1:2241301/140‑1 (MQ=255)
                                                                                              tCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgca                                               <  1:1053769/140‑1 (MQ=255)
                                                                                              tCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgca                                               <  2:1650625/140‑1 (MQ=255)
                                                                                              tCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgca                                               <  2:903561/140‑1 (MQ=255)
                                                                                              tCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgca                                               <  2:1838853/140‑1 (MQ=255)
                                                                                              tCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCAGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgca                                               <  1:2508456/140‑1 (MQ=255)
                                                                                              tCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTGTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCcatgca                                               <  1:1377505/140‑1 (MQ=255)
                                                                                                  tCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATggg                                           >  2:2269644/1‑140 (MQ=255)
                                                                                                    cGACTATACGGGCGTTTTCGGATTTTTTTTTTAAGTTTTGGGAGATTTGTATTGGTTTTGCGTTTTTAAAACAAGAGGCCACCCCGAAAAAACCCACAACAACAAAAAATAATATATCAAGTAAAATCCATTGATGGGGt                                         >  1:998507/1‑140 (MQ=255)
                                                                                                      aCTATACGGGCGTGTTCGGATTTTTGTTTGAAGTTTTTGGAGATTTGCATGTCTTTTACGTTTTTAATACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAACTAAAAACCCTGCATGGGGTaa                                       >  1:1385398/1‑140 (MQ=255)
                                                                                                          taCGGGCGTTTTCGGATTTTTGTTTTAATGTTTGGGAGATTTTAATTGGGTTTCCGTTTTTAAAAAAAGAGGCAACCCACATAAAACCGACAACAACAAAAAATAATCTAACAACTAAACTACATGCCTGGGGTAattaa                                   >  1:1938714/1‑138 (MQ=255)
                                                                                                            cGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAattcatt                                 >  2:428391/1‑140 (MQ=255)
                                                                                                            cGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAattcatt                                 <  1:1326008/140‑1 (MQ=255)
                                                                                                                  tgttCGGATTTTTTTTTTAAGTTTTGGGAGATTTTAATTGGTTTTCCGTTTTTAAAAAAAGATGCAAGCCACAAAAAACCCACAACAACAAAAAATAATATAGCAAGTAAACTCCATGGATGGGGTAATTAATTCGTTGc                           >  1:1135790/3‑140 (MQ=255)
                                                                                                                    ttCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCaa                         <  1:803884/140‑1 (MQ=255)
                                                                                                                        gATTTTTGTTTGAATTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAata                     <  2:428388/140‑1 (MQ=255)
                                                                                                                               gtttgAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAAt              <  2:969663/140‑1 (MQ=255)
                                                                                                                               gtttgAAGTTGTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAAt              <  1:1760144/140‑1 (MQ=255)
                                                                                                                                tttgAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGCCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAATa             <  2:1977656/140‑1 (MQ=255)
                                                                                                                                  tgAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAATaga           <  2:2260845/140‑1 (MQ=255)
                                                                                                                                    aaGTTTTGTGAGATTTTAATTTCTTTTCCGTTTTTAAAACAAGACGCAATCAAGATAAACCCGACAACAACAAAAAATAATATAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAATAGAGt         <  2:1251190/140‑1 (MQ=255)
                                                                                                                                    aaGTTTTGTGAGATTTTAATGGATTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAATAGAGt         <  2:2054293/140‑1 (MQ=255)
                                                                                                                                           gggAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAATAGAGTTACTAAt  <  2:148108/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
GTGGAGAAGGTGTAAGAGAGAGAGAAGGAGCATCTCTGATGTTGGAATTATTCAGAGATGCTGTTTTTGTATTTTTGTTCTAATACGAAGTCGATCATTCCGACTATACGGGCGTTTTCGGATTTTTGTTTGAAGTTTTGGGAGATTTGAATGGCTTTTCCGTTTTTAAAACAAGAGGCAAGCCAGATAAACCCGACAACAACAAAAAATAATCTAGCAAGTAAACTCCATGCATGGGGTAATTCATTCGTTGCAAAATATAAAAATAGAGTTACTAAT  >  NZ_CP034943/240059‑240337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑