| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 514,968 | 0 | G | T | 27.7% | 153.0 / 22.7 | 84 | V128L (GTA→TTA) | EO946_RS02645 | outer membrane lipoprotein carrier protein LolA |
| Reads supporting (aligned to +/- strand): ref base G (48/12); new base T (0/23); total (48/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCGAAAAAGGACCAAAATCAAGTCATTTTACGAAATGAAAACGGAGTATTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAGATATGAGC > NZ_CP034943/514830‑515105 | gctataaaGGACCAAAATCAAGTGTTTTTACGAAATGAAAACGGTGTTTTTGTTCTCACGCCGTATTTAAATAAGAGCTTCATGTTTCAAAGCGACTGGCCGAACAAAAGCAGCCAGGTCTACTTGTTTGAATCGCTCGt < 1:2313721/135‑1 (MQ=255)ccGAAAAAGGACCAAAATCAAGTCATTTTACGAAATGAAAACGGAGTATTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGt < 1:1582340/140‑1 (MQ=255) aaaGGACCAAAATCAAGTCATTTTACGAAATGAAAACGGAGTATTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAgg < 1:1572655/140‑1 (MQ=255) aaGTCATTTTACGAAATGAAAACGGAGTATTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGAc > 1:1907996/1‑140 (MQ=255) ttttACCAATTAAAAACGTAGTTTTTGTTCTCACGCCTTCTTAAAATAAGAGATTCTGGTTAAAAAGCGACTGGCCCAACAACAGCACCCAGTTCTACTTTTTTGAATCGCTCGTAAAGTATGTAAAAAACGACTCGGAt < 1:290337/140‑1 (MQ=255) ttttACCAAATGAAACCGGATTATTTTTTCTCACGCAGTATTTAAATAAGAGATTCAGTTTTAAAAGCGACTGGCCCAACAACACCAGCCAGGTCTACTTTTTTGAATCGCGCGTAAAGGATGTTCAAAACGACTCGGAt < 2:2366260/140‑1 (MQ=255) aaaCGGAGTATTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTg > 1:825984/1‑140 (MQ=255) aaaCGGAGTATTTGTTCTCACGCCGTCTTTAAATAAGAGCTGCTGGTTACAACGCGCCTGGCCGAACAACCGCCGCCTGTTATACTTGTTTGAATCGCTGTTAATGTATGTACAACACGACTCGGATGCAGTTTTCACTg < 1:550290/140‑1 (MQ=255) tctttGTTCCCACGCCGTATTTAAATACCAGCTACAGTTTAAAAAGCGACTCCCCGAACAACAGCAGCAAGGACTACTTGTTTGAAACGCTCCTAAAGCATGTTAAAAACGACTCGGATGCAGTTTTCACTGCCaaagaa < 1:2305358/138‑1 (MQ=255) tATTTGTTCTCACGCCTTATTTAAATAAGAGCTTCCGTTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGTTCTACTTGTTTGAATCGCTCTTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCaaagaa < 2:1907996/140‑1 (MQ=255) tATTTGTTCCCCCGCCGTTTTTAAACAAGCGGTTCAGGTTTAAACGCGACTGCCCCAACAACAGCAGCCTGTTATAGTTTTTTCAATCGCTCTTAAAGCTTGTACAAAACGACTCGGATGCAGTTTTCACTGCCaaagaa < 1:672959/140‑1 (MQ=255) aTTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCaaagaaa > 2:2236307/1‑140 (MQ=255) aTTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCaaagaaa > 1:1024057/1‑140 (MQ=255) gTTCTCAGGGCTTCTTTAAATACTCGTTTGTGGTTCAATCGCCACTGCCCGAAAAACACCCGCCTTGTCTAGTTTTTTGACTCGCTGTTAATGTATTTAAAACACGACTCGGATGCAGTTTTCACTGCCAaagaaaagaa < 1:64450/140‑1 (MQ=255) ctcACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATa > 1:475511/1‑140 (MQ=255) ctcACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATa > 1:957189/1‑140 (MQ=255) ctcACGCCGTCTCTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATa > 1:580962/1‑140 (MQ=255) cACGCCGTCTTTAAATAAGAGCTTCTTTTTTAAACGCGACTGGCCCAACACCCGCAGCCTGTTCTAATTTTTTGAATCGCTCGTAACGGATGTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACg < 1:1396310/140‑1 (MQ=255) cACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTCAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGACAAGAAATACg > 2:1011025/1‑140 (MQ=255) cACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAAt < 2:786849/137‑1 (MQ=255) cACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAAt > 1:786849/1‑137 (MQ=255) cACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACg > 2:52063/1‑140 (MQ=255) cGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGACAAGAAATACGTa > 1:1411326/1‑140 (MQ=255) cGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTa > 1:643506/1‑140 (MQ=255) cGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTa > 1:2305055/1‑140 (MQ=255) cGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTa > 1:2304314/1‑140 (MQ=255) tttAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGaaa > 2:1026155/1‑140 (MQ=255) aaTATGAGCTTCAGTTTTCAAAGCGACGGGCCTAAAAACAGCAGCCTGTTCTAGTTTTTTGAATCGCTCTTAAAGTATTTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTaa < 1:1362817/140‑1 (MQ=255) aaTAAGAGCTTCTGTTTTAAACGCGAGTGGCCCACCAACCGCAGCCAGGTCTACTTGTTTGAATCGCTCTTAAAGTATGTTCAACACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTaa < 1:231532/140‑1 (MQ=255) tAATAGATTCAGTTTTAAACGCGACTGGCCGAACAACAGCAGCCTGGTCTATTTTTTTGAATGGATCTTAAAGGATGTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTaaaa < 2:2222924/140‑1 (MQ=255) agagCTTCTGTTTTAAAAGCGACTGGCCCAAAAACAGCAGCCTGGTCTACTTTTTTTAATCGCTCTTAACGGATTTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACg < 1:642330/140‑1 (MQ=255) agagCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACg > 1:1446732/1‑140 (MQ=255) agagCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACg > 2:1203431/1‑140 (MQ=255) agagCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTAGGTTGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGACACTAAAACg > 2:1398290/1‑140 (MQ=255) gagCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAATCGa > 1:594613/1‑140 (MQ=255) agCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGaa > 1:2483053/1‑140 (MQ=255) agCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGaa > 1:2048984/1‑140 (MQ=255) agCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGaa > 1:421346/1‑140 (MQ=255) agCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGaa > 1:1357112/1‑140 (MQ=255) agCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGaa > 1:2218550/1‑140 (MQ=255) cttatgttttAAACGCGACTGGCCCAAAAACAGCAGCCAGTTATAGTTGTTTTAATCGATCTTAAAGGATGTTCAACACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACt < 1:355220/133‑1 (MQ=255) cTTCTGGTTAAAACGCGACTGGCCTAACAACCGCAGCCATGTCTATTTTTTTGAATCGCTCTTAAAGCATTTAAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACt < 1:645652/140‑1 (MQ=255) cTTCAGTTTTCAAAGCGACTGCCCCAACAACAGCAGCCAGTTCTAATTGTTTGAATCGCTCTTAAAGGATGTACAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACt < 1:706589/140‑1 (MQ=255) tctgttttAAAAGCTAGTGGCCTAACAACAGCAGCCTGTTATACTTTTTTTAATCGATTTTAAAGTATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTAt < 1:2107648/135‑1 (MQ=255) tccggTTTCAAAGCTACTGGCCTAACAAACGCCCCCTGTTATATTTGTTTGAATCGCGGGTAAAGCTTTTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTAt < 1:1445473/137‑1 (MQ=255) tCAGGTTTCAAAGCGACTGGCCGAACAACCGCACACATGTATAATTTTTTGAATCGCTATTAAAGTATGTAAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTAt < 1:1378429/140‑1 (MQ=255) tCAGGTTTAAACGCGACTGGCCGAACAACAGCAGCCAGGTATACTTTTTTTAATCGCTCGTAACGTATTTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTAt < 1:237805/140‑1 (MQ=255) gttttCAACGCGACTGGCCTAACAACAGCAGCCAGGTTTAGTTTTTTTAATCGATCTTAAAGGATGTACAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAg < 1:1776322/138‑1 (MQ=255) tttCAAAGCGACTGGCCTAAAAACAGCCCCCAGTTCTACTTTTTTGAATCGCTCTTAAAGTATTTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCa < 1:681913/140‑1 (MQ=255) cgaggggCCCAACAACAGCAGCCTGTTATAGTGTTTTGAATCGATGGTAAAGCTTTTAAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACaaaa < 1:1701093/135‑1 (MQ=255) cGACTGGCAGAAAAACAGCAGCCTGGTTTATTTTTTTTAATGGGTCGTAATGTTTGTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACaaaa < 1:2042120/140‑1 (MQ=255) cTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAATACGACTCGGATGAAGTTTTCACTGACACAGAAACGAACTACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAAtgt > 2:1781219/1‑139 (MQ=255) cTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAAtgc > 1:1679351/1‑140 (MQ=255) cccaacaccAGCAGCCAGGTATATTTTTTTGAATCGCTCTTAAAGGATTTACAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGcc < 1:1129316/137‑1 (MQ=255) aacaacAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAAc > 2:500930/1‑140 (MQ=255) aacaGCAGCAATTTATACTTTTTTTAATCGGTCTTAAAGGTTTTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCa < 1:2351959/140‑1 (MQ=255) aacaGCAGCAAGGTCTACTTTTTTGAATCGCTCTTAAAGGATGTTAAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCa < 1:2208371/140‑1 (MQ=255) aacaGCACCCTGGTATACTTGTTTGAATCTCTCTTAATGTATGTAAAACACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCa < 1:2208382/140‑1 (MQ=255) cagcCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAATCGAACTATCAGCATAACAAAATGCTGCCAACGCAAGaaa > 1:2267890/1‑140 (MQ=255) aGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACg > 2:2124657/1‑140 (MQ=255) gTCTACTTGTTTGAATCGCTCGTAAATTATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGtt > 2:947075/1‑140 (MQ=255) gTCTACTTGTTTGAATCGATAGTAAAAGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGtt > 2:915682/1‑140 (MQ=255) cTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACa > 2:185771/1‑140 (MQ=255) tGTTTGAATCGCTCTAAAAGTATGTTAAAAACGACTCGGATGAAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACaaa < 2:1684101/140‑1 (MQ=255) tttttAATGGATCTTAAAGGATTTACAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACaaaa < 1:1670400/139‑1 (MQ=255) tttttAATCGCTATTAATGTATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACaaaa < 1:1399022/139‑1 (MQ=255) ttttAATCGCTCTTAAAGTATGTTCAACACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAACCGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACaaaaa < 2:588347/140‑1 (MQ=255) ttGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACCGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGcc > 2:1871778/1‑112 (MQ=255) ttGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACCGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGcc < 1:1871778/112‑1 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCTAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAg > 1:2493446/1‑140 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCACAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAg > 1:45624/1‑140 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGGAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAACTCACGTGTAACaaaaatg > 2:1673608/1‑138 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTATCAAAAAAg > 1:2507349/1‑140 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAg > 1:805523/1‑140 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAg > 2:366048/1‑140 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAg > 1:2493573/1‑140 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAg > 1:941375/1‑140 (MQ=255) tGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAAAACGTATTCGAAACTAAAACGAACAATCAGCATAACAAAAACATGCCAACGCAAGAAATCACGTATAaaaaaaaac > 1:1983261/1‑139 (MQ=255) tGAATCGCTCGTAAAGGATCTTCAAAACGACTCGGATGCAGATTACACTGACAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGGTTAACaaaaaac > 2:1804685/1‑139 (MQ=255) cTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCCAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACACCTAAGATATGAg > 2:1972688/1‑140 (MQ=255) cTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAGATATGAg > 2:429629/1‑140 (MQ=255) cTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAGATATGAg > 2:1659633/1‑140 (MQ=255) cTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATAACGTTTAACAAAAAAGATATGAg > 1:2312075/1‑140 (MQ=255) tCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAGATATGAGc > 1:11970/1‑140 (MQ=255) | CCGAAAAAGGACCAAAATCAAGTCATTTTACGAAATGAAAACGGAGTATTTGTTCTCACGCCGTCTTTAAATAAGAGCTTCAGGTTTCAAAGCGACTGGCCGAACAACAGCAGCCAGGTCTACTTGTTTGAATCGCTCGTAAAGGATGTTCAAAACGACTCGGATGCAGTTTTCACTGCCAAAGAAAAGAAATACGTATTCGAAACTAAAACGAACTATCAGCATAACAAAATGCTGCCAACGCAAGAAATCACGTTTAACAAAAAAGATATGAGC > NZ_CP034943/514830‑515105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |