Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0540CG33.6% 188.5 / 33.8 117E573Q (GAA→CAA) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (16/59);  new base G (38/0);  total (58/59)
Fisher's exact test for biased strand distribution p-value = 1.23e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 120 total aligned reads displayed.

CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAAT  >  NZ_CP034943/633919‑634191
                                                                                                                                       |                                                                                                                                         
cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttc                                                                                                                                       <  2:637884/140‑1 (MQ=255)
cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAAAGGTTTTAACAGTGGCTTCAATTTCTTCAATCCGACTTAGTCGTTGGCGttctttc                                                                                                                                       >  2:2043454/1‑140 (MQ=255)
      tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTGtttttg                                                                                                                                 >  1:2163950/1‑139 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTAAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCa                                                                                                                               <  2:1992836/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                              <  2:1803426/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                              <  2:416313/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTGTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                              <  2:763796/140‑1 (MQ=255)
         cTTGTAACTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                              <  2:1798729/140‑1 (MQ=255)
          ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGtttttggatt                                                                                                                             >  1:1522346/1‑135 (MQ=255)
          ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGAAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGTGGGTCTTTATTTTTGCAtt                                                                                                                             >  2:1642801/1‑140 (MQ=255)
             tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTGTGTTTGCATTCtt                                                                                                                          >  1:228931/1‑140 (MQ=255)
                cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                       <  2:1322604/140‑1 (MQ=255)
                  tttCATGGTCTTGATATATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGAGGGAGTCGTGGGGGTTGTTTGTGTTTGCTTTGTTTttct                                                                                                                     >  1:1840849/1‑140 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTTCGATCttttttt                                                                                                                     >  1:325529/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTATTTATTTTTACATTGtttttat                                                                                                                     >  2:2122316/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTGCAATGtttttgt                                                                                                                     >  1:1748540/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTATTTATTTTTACATTGtttttat                                                                                                                     >  2:835424/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTGTTTTTACAATGTTTttct                                                                                                                     >  2:2365775/1‑140 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTGTTTGGATTAtttttgt                                                                                                                     >  1:2253564/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTATTTGTTTTTACATTATTTttct                                                                                                                     >  2:752822/1‑140 (MQ=255)
                  tttCATGGTCTTGATAGATGTCCGGATCACATAGCAATTCATCGTTATGACTAAGGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGGGTCGTGGGCGGTCGTTGGTTTTCCCTTGTTTttct                                                                                                                     >  1:1192086/1‑140 (MQ=255)
                   ttCATGGTCTTGATATATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTGCATTATTTttgtt                                                                                                                    >  1:513710/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATTGTTTGAACAGTGTCTTCAATTTCTTCAATCAGACGGAGTCTTTTGCGTTGTTTCTTTTTAAATTATTTttatt                                                                                                                    >  2:1409790/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCTATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTATTTTTACATTCTTTttgtt                                                                                                                    >  2:153955/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCAATCTTTttgtt                                                                                                                    >  1:2351333/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCAGTCTTTttgtt                                                                                                                    >  1:488165/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTACATTATTTttctt                                                                                                                    >  2:2054084/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGGTTTGTTTTTCGAGTCTTTttgtt                                                                                                                    >  1:59209/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCGTTCTGTTTGCATTCTTTttctt                                                                                                                    >  2:76027/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGGTTTGTTTTTGGATTATTTttgtt                                                                                                                    >  1:1568456/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACAGATCAATTCATCGTTATGACTCATGTTTTCTTAAATGGTTTGAACAGTGGCTTCAATTTCTTCAATACGACGGAGTCGTTTGCGTTATTTCTTTTTGGATTCTTTttatt                                                                                                                    >  2:197394/1‑140 (MQ=255)
                                  gATTTCCGGATCACATAGCATTTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                     <  2:1254067/140‑1 (MQ=255)
                                  gATTTCCGGATCACATAGCAATTCCTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                     <  2:417281/140‑1 (MQ=255)
                                  gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                     <  2:516987/140‑1 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCTTTGGTTTTGCCTTGTTTTTGTTCGTAATATGAAAGttt                                                                                                    >  2:701391/1‑140 (MQ=255)
                                     ttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTCCATTCTTTTTGTTCTTAATATGAAAGTTTTg                                                                                                  >  2:1568933/1‑140 (MQ=255)
                                        cGGATCACATAGCCAGTCATCGTTATGACTAATGATGTCTACAATGGTTTGAACCGTGGCTCCAATTTCCTCACACCGACGGAGTCGTTGGCGCTCTTTCGTTTGCCATTCCCTTTCTACTTCATATGAACGTTTTGAGt                                                                                               <  2:1168213/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTACTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  2:2214599/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  1:2488144/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  2:1674487/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  2:1539591/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  2:2493137/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  2:1303545/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  2:462595/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGATTTCTTCCATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  2:949362/140‑1 (MQ=255)
                                        cGGATCACATAGCAAGTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCACTCCGACGGAGTCGTTGGCGTACTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                               <  1:2113730/140‑1 (MQ=255)
                                                       ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGGATTCTTTTTGTTGTTGATATTTACGGTTTTATTGAGGCTTAAACGAAg                                                                                >  1:692228/1‑140 (MQ=255)
                                                       ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGGATTGTGTTTGGTGTTGATATTTACCTTTTTTGTCAGGCTTAAACGAAg                                                                                >  1:896868/1‑140 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTGCAATCTTTTTCTTCTTGATATGTACGTTTTGAGTCAGGCGTAACCGAAGCa                                                                              >  2:1217424/1‑140 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGTTTGGTTTTCCAATATTTTTGTTCTTCATATGAAAGTTTTGATTCAGGCTTAAACGAAGCa                                                                              >  2:1675538/1‑140 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAAATTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTATTTTTATTCTTAATATGAACGTTTTGAATAAGGCTTAACAGAAGCa                                                                              >  2:855200/1‑140 (MQ=255)
                                                              ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTTCAATGTTTTTATTGTTAATATTAACGGTTTTAGTGAGGGTTAAAAGAAGAAGGCGt                                                                         >  1:1151104/1‑140 (MQ=255)
                                                              ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTGCATTCTTTTTGTTCTTGAAATTAAAGTTTTGATTCAGGCGTAAACGAACCAGGCGt                                                                         >  1:1800284/1‑140 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                <  1:1253453/140‑1 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                <  1:2093188/140‑1 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGGCTTGTTTTTTTTGTTGATATTAAAGTTTTGTGTGAGGGTTTAAAGAAGAACGCGGTTTTTAggtt                                                               >  1:1890748/1‑138 (MQ=255)
                                                                          ttttCTTCAATGGTTTTAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTATTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTc                                                             <  1:1427243/140‑1 (MQ=255)
                                                                            ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTGTGTTTTTTCCTTCGTTTTGTTCTTCATATGAACCTTTTTTGTCAGGCGTAACCGAAGCACGCGTTTTTTGGGGttaag                                                           >  1:1120252/1‑137 (MQ=255)
                                                                             tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGGTGTTTCTTTTTCCAGTCTTTTTCTTCTTCATATGAACGTTTTTAGTGAGGCTTAAACGAAGCATGCGTTTTTTCGGATTCctc                                                          >  2:1798462/1‑140 (MQ=255)
                                                                               ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACATTATTTTTATTCTTCATATGAAAGGTTTGAGTCAGGCTTTAACCAAGCAGGCGTGTTTTAGGATTGCTCtt                                                        >  2:27307/1‑140 (MQ=255)
                                                                                    tGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTCCATTCTTTTTCTTCTTAATAATAAAGATTTTAGTGAGGCTTAAACGAAACAGGCGTTTTTTAGGATTCCTCTTGCGGa                                                   >  2:642486/1‑140 (MQ=255)
                                                                                         tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTCTTTTTCCAGTATTTTTGTTATTGATATTAACGTTTTGAGGCAGGCTTAAACGAAGCAGGGGTTTTTTGGGTTTTCTCTTGCTTGTTCAt                                              >  1:1232307/1‑140 (MQ=255)
                                                                                          taaCAGTGTCTTAAATTTATTCAATCCGACGGAGTCTTTTGCGTTCTTTATTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGATTCATTTTTAACATTAGCTGTCTTTTTTTCTGATTTCTGTTGCTTATTGAtt                                             <  2:596123/139‑1 (MQ=255)
                                                                                          gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCATGCTTAACATAAGCTGTCTTTTTTTCTGATTCCTCTTGCTTATTGAtt                                             <  2:692228/140‑1 (MQ=255)
                                                                                          gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGTCTTAACAGAAGCTGTCTTTTTTTCGGATTCCTCTTGCTTATTGAtt                                             <  2:2258650/140‑1 (MQ=255)
                                                                                              aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                         <  1:302277/140‑1 (MQ=255)
                                                                                              aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTAATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                         <  1:1642801/140‑1 (MQ=255)
                                                                                               gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                        <  2:1568456/140‑1 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCTACGGAGTCGTTGGGGGTGGGTGTTTTTCCCGTGTTTTTATTATTTATATGGAAGTTTTGTGTCCAGGTTAACCGACGCTCGAGTTTTTTGGGGTTCCGGTTGCTGATTGAgtttatgc                                       >  2:1639773/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCCATCTTTTTGTTCTTGATATGAACGTTTTGAGTCAGGGTTAAACGAATCAGGCGTTTTTTAGGATTGCGGTTGCTGGTTGATTTTGTcc                                       >  2:1722742/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCGCTTATTTTTGTTGTTAATATGAACGTTTTGATTCAGGCTTAAACGAAGAAGGCGTTTTTTCGGAGTGCGCTTGGGGATTCATTTTATcc                                       >  2:1067970/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTCTTTTTGTTCTTCATATGAACGTTTTGAGTCACGCTGAACCTAAGCAGGCGTTTTTTGGGATTGCTCTTGCTGTTTAATTTTCTcc                                       >  2:1659146/1‑140 (MQ=255)
                                                                                                   cTTCAATTTCTTCAATCCTACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt                                    <  1:2472317/140‑1 (MQ=255)
                                                                                                   cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt                                    <  1:171589/140‑1 (MQ=255)
                                                                                                     tCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTc                                  <  1:2023366/140‑1 (MQ=255)
                                                                                                        aTTTCTTCACTCCGACGGAGTCGTTGGCGTTCTTTCATTTTCCAGTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                               <  2:1840868/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                               <  1:2456415/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                               <  2:1748540/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                               <  2:1840849/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                               <  2:325529/140‑1 (MQ=255)
                                                                                                           tcttcAATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                            <  2:1303103/140‑1 (MQ=255)
                                                                                                           tcttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                            <  1:642486/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                          <  2:811473/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTGTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                          <  2:2054548/140‑1 (MQ=255)
                                                                                                              tcAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTCCAGTCTTTTTGTTATTCATATGAACGGTTTTTGTGCGGCTTAAACGAAGCAGGGGTTTTTTCGGGTTACTCTTGCTGATTGATTTTGTACAAATCAAtctgctg                         >  2:678287/1‑139 (MQ=255)
                                                                                                                 aTCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTGTTGTTGAAATGAACCTTTTTAGTCAGGCTTAACCGAACCAGGGGGTTTTTGGGATTGCTGTTGGGGTTTCATTTTATCCCATTGAAagtgctgggt                      >  2:225729/1‑136 (MQ=255)
                                                                                                                 aTCCGACGGAGTCGTTGGCGTTGTTTCTTTTTACATTCTTTTTCGTCTTCATATGAAAGGTTTTAGTGAGGCTTAAACGAACCAGGCGTTTTTTCGGATTACTCGTGCTGTTTAATTTTCTACAATTCAAGCTGCGCTGt                      >  2:2007703/1‑140 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTGTTTTTGCATTCTTTTTATTCTTCATATGAACGTTTTTAGTCAGGCTTAAACGAAGCAGGCGGTTTTTGGGATTGCGCTTGGTGGTTGATTTTATCCAATTGAAGCGGGTCTGttttttt                >  2:2339922/1‑140 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                <  1:2054084/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                <  1:2297857/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                <  1:153955/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct              <  2:1522346/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct              <  2:2076107/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct              <  2:867017/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct              <  2:2145685/140‑1 (MQ=255)
                                                                                                                         gAGTCGGTGGCGTTCTTTCTTTTTCCATTCTTTCTCTTCTTCCTATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct              <  2:572480/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg           <  2:1192086/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg           <  2:249291/140‑1 (MQ=255)
                                                                                                                            tCGGTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg           <  2:2163965/140‑1 (MQ=255)
                                                                                                                                     ttctttctTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATaataat  <  1:2339922/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                         
CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAAT  >  NZ_CP034943/633919‑634191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑