Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0580CG32.1% 211.8 / 27.1 117K571N (AAG→AAC) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (16/58);  new base G (35/0);  total (58/59)
Fisher's exact test for biased strand distribution p-value = 1.70e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633919‑634197
                                                                                                                                           |                                                                                                                                           
cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttc                                                                                                                                             <  2:637884/140‑1 (MQ=255)
cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAAAGGTTTTAACAGTGGCTTCAATTTCTTCAATCCGACTTAGTCGTTGGCGttctttc                                                                                                                                             >  2:2043454/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTAAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCa                                                                                                                                     <  2:1992836/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                    <  2:416313/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                    <  2:1803426/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTGTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                    <  2:763796/140‑1 (MQ=255)
         cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAAGGGTTTGAACAGTGGCTTCAATTTCTTCAATCAGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                    <  2:691842/140‑1 (MQ=255)
          ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGtttttggatt                                                                                                                                   >  1:1522346/1‑135 (MQ=255)
          ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCAtt                                                                                                                                   >  2:2023366/1‑140 (MQ=255)
          ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGAAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGTGGGTCTTTATTTTTGCAtt                                                                                                                                   >  2:1642801/1‑140 (MQ=255)
             tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTGTGTTTGCATTCtt                                                                                                                                >  1:228931/1‑140 (MQ=255)
             tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTATTTTTcgcgtctt                                                                                                                                >  1:1697807/1‑133 (MQ=255)
                cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                             <  2:1322604/140‑1 (MQ=255)
                  tttCATGGTCTTGATATATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGAGGGAGTCGTGGGGGTTGTTTGTGTTTGCTTTGTTTttct                                                                                                                           >  1:1840849/1‑140 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTTCGATCttttttt                                                                                                                           >  1:325529/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTATTTATTTTTACATTGtttttat                                                                                                                           >  2:2122316/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCCGTCtttttgt                                                                                                                           >  1:2163965/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTGCAATGtttttgt                                                                                                                           >  1:1748540/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTGTTTTTACAATGTTTttct                                                                                                                           >  2:2365775/1‑140 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTGTTTGGATTAtttttgt                                                                                                                           >  1:2253564/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGTGCGTTCTTTATTTTTACATTAtttttat                                                                                                                           >  2:302277/1‑138 (MQ=255)
                  tttCATGGTCTTGATAGATGTCCGGATCACATAGCAATTCATCGTTATGACTAAGGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGGGTCGTGGGCGGTCGTTGGTTTTCCCTTGTTTttct                                                                                                                           >  1:1192086/1‑140 (MQ=255)
                   ttCATGGTCTTGATATATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTGCATTATTTttgtt                                                                                                                          >  1:513710/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATTGTTTGAACAGTGTCTTCAATTTCTTCAATCAGACGGAGTCTTTTGCGTTGTTTCTTTTTAAATTATTTttatt                                                                                                                          >  2:1409790/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCAATCTTTttgtt                                                                                                                          >  1:2351333/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGGTTTGTTTTTCGAGTCTTTttgtt                                                                                                                          >  1:59209/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCGTTCTGTTTGCATTCTTTttctt                                                                                                                          >  2:76027/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGGTTTGTTTTTGGATTATTTttgtt                                                                                                                          >  1:1568456/1‑140 (MQ=255)
                                  gATTTCCGGATCACATAGCATTTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                           <  2:1254067/140‑1 (MQ=255)
                                  gATTTCCGGATCACATAGCAATTCCTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                           <  2:417281/140‑1 (MQ=255)
                                  gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                           <  2:516987/140‑1 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCTTTGGTTTTGCCTTGTTTTTGTTCGTAATATGAAAGttt                                                                                                          >  2:701391/1‑140 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt                                                                                                          <  2:789309/140‑1 (MQ=255)
                                     ttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTCCATTCTTTTTGTTCTTAATATGAAAGTTTTg                                                                                                        >  2:1568933/1‑140 (MQ=255)
                                      tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCCTTCTTTCTTTGTGCATTTTTTTTCTTGTTGGTATGTACGTTTTgt                                                                                                       >  2:1427243/1‑139 (MQ=255)
                                        cGGATCACATAGCCAGTCATCGTTATGACTAATGATGTCTACAATGGTTTGAACCGTGGCTCCAATTTCCTCACACCGACGGAGTCGTTGGCGCTCTTTCGTTTGCCATTCCCTTTCTACTTCATATGAACGTTTTGAGt                                                                                                     <  2:1168213/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTACTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:2214599/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:2493137/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:1674487/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:1539591/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  1:2488144/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:462595/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGATTTCTTCCATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:949362/140‑1 (MQ=255)
                                        cGGATCACATAGCAAGTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCACTCCGACGGAGTCGTTGGCGTACTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  1:2113730/140‑1 (MQ=255)
                                                       ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGGATTCTTTTTGTTGTTGATATTTACGGTTTTATTGAGGCTTAAACGAAg                                                                                      >  1:692228/1‑140 (MQ=255)
                                                       ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGGATTGTGTTTGGTGTTGATATTTACCTTTTTTGTCAGGCTTAAACGAAg                                                                                      >  1:896868/1‑140 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGGATTGTTTTTCTTGTTCTTTAGTACGTTTTGTGTGAGGCTTAACCCAAgaa                                                                                    >  2:1675565/1‑138 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTGCAATCTTTTTCTTCTTGATATGTACGTTTTGAGTCAGGCGTAACCGAAGCa                                                                                    >  2:1217424/1‑140 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAAATTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTATTTTTATTCTTAATATGAACGTTTTGAATAAGGCTTAACAGAAGCa                                                                                    >  2:855200/1‑140 (MQ=255)
                                                              ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTTCAATGTTTTTATTGTTAATATTAACGGTTTTAGTGAGGGTTAAAAGAAGAAGGCGt                                                                               >  1:1151104/1‑140 (MQ=255)
                                                              ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTGCATTCTTTTTGTTCTTGAAATTAAAGTTTTGATTCAGGCGTAAACGAACCAGGCGt                                                                               >  1:1800284/1‑140 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:1253453/140‑1 (MQ=255)
                                                                       aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:2093188/140‑1 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCAGTCTTTTTGTTGTTGATATGAACGTTTTTAGTGAGGCTTAAAACAAGCACGCGTTTTTTgggtt                                                                     >  1:2370481/1‑138 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGGCTTGTTTTTTTTGTTGATATTAAAGTTTTGTGTGAGGGTTTAAAGAAGAACGCGGTTTTTAggtt                                                                     >  1:1890748/1‑138 (MQ=255)
                                                                          ttttCTTCAATGGTTTTAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTATTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTc                                                                   <  1:1427243/140‑1 (MQ=255)
                                                                            ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTGTGTTTTTTCCTTCGTTTTGTTCTTCATATGAACCTTTTTTGTCAGGCGTAACCGAAGCACGCGTTTTTTGGGGttaag                                                                 >  1:1120252/1‑137 (MQ=255)
                                                                             tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGGTGTTTCTTTTTCCAGTCTTTTTCTTCTTCATATGAACGTTTTTAGTGAGGCTTAAACGAAGCATGCGTTTTTTCGGATTCctc                                                                >  2:1798462/1‑140 (MQ=255)
                                                                             tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTCCATTGTTTTTATTATTCATATGAACGTTTTTTGTGAGGGATAACCGAAAGAGGGGGTTTTTAGGATTCcta                                                                >  2:1827797/1‑139 (MQ=255)
                                                                               ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACATTATTTTTATTCTTCATATGAAAGGTTTGAGTCAGGCTTTAACCAAGCAGGCGTGTTTTAGGATTGCTCtt                                                              >  2:27307/1‑140 (MQ=255)
                                                                                          taaCAGTGTCTTAAATTTATTCAATCCGACGGAGTCTTTTGCGTTCTTTATTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGATTCATTTTTAACATTAGCTGTCTTTTTTTCTGATTTCTGTTGCTTATTGAtt                                                   <  2:596123/139‑1 (MQ=255)
                                                                                          gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCATGCTTAACATAAGCTGTCTTTTTTTCTGATTCCTCTTGCTTATTGAtt                                                   <  2:692228/140‑1 (MQ=255)
                                                                                          gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGTCTTAACAGAAGCTGTCTTTTTTTCGGATTCCTCTTGCTTATTGAtt                                                   <  2:2258650/140‑1 (MQ=255)
                                                                                              aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                               <  1:302277/140‑1 (MQ=255)
                                                                                              aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTAATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                               <  1:1642801/140‑1 (MQ=255)
                                                                                               gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                              <  2:1568456/140‑1 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCTACGGAGTCGTTGGGGGTGGGTGTTTTTCCCGTGTTTTTATTATTTATATGGAAGTTTTGTGTCCAGGTTAACCGACGCTCGAGTTTTTTGGGGTTCCGGTTGCTGATTGAgtttatgc                                             >  2:1639773/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCCATCTTTTTGTTCTTGATATGAACGTTTTGAGTCAGGGTTAAACGAATCAGGCGTTTTTTAGGATTGCGGTTGCTGGTTGATTTTGTcc                                             >  2:1722742/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCGCTTATTTTTGTTGTTAATATGAACGTTTTGATTCAGGCTTAAACGAAGAAGGCGTTTTTTCGGAGTGCGCTTGGGGATTCATTTTATcc                                             >  2:1067970/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTCTTTTTGTTCTTCATATGAACGTTTTGAGTCACGCTGAACCTAAGCAGGCGTTTTTTGGGATTGCTCTTGCTGTTTAATTTTCTcc                                             >  2:1659146/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTGTTTGTTTTTGCCTTCTTTTTCTTGTTCATATGTCCGTTTTTTTTAAGGGTTTACCGAAGCAGGGGTTTTTTGGGCTTGAGCTTGCGGGTTGAttttatgg                                             >  2:2131341/1‑136 (MQ=255)
                                                                                                   cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt                                          <  1:141862/140‑1 (MQ=255)
                                                                                                     tCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTc                                        <  1:2023366/140‑1 (MQ=255)
                                                                                                        aTTTCTTCACTCCGACGGAGTCGTTGGCGTTCTTTCATTTTCCAGTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  2:1840868/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGCCGGAGGCGTTGGCGTTCTTTCTTTTTCCATTCTGTTTCTTCTTCATATGAACGTGTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  1:865376/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  1:2456415/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  2:1748540/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  2:1840849/140‑1 (MQ=255)
                                                                                                           tcttcAATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                                  <  2:1303103/140‑1 (MQ=255)
                                                                                                           tcttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                                  <  1:642486/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTGCATTGTTTTTCTTCTTCATATGTACGTTTTGATTCAGGGTTAAACGAAGCAGGCGTTTTTTAGGATTGCTCGTGCTGTTTGATTTTCTCCAATTCAAgctgct                                >  2:1225775/1‑140 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  2:811473/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTGTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  2:2054548/140‑1 (MQ=255)
                                                                                                              tcAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTCCAGTCTTTTTGTTATTCATATGAACGGTTTTTGTGCGGCTTAAACGAAGCAGGGGTTTTTTCGGGTTACTCTTGCTGATTGATTTTGTACAAATCAAtctgctg                               >  2:678287/1‑139 (MQ=255)
                                                                                                                 aTCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTGTTGTTGAAATGAACCTTTTTAGTCAGGCTTAACCGAACCAGGGGGTTTTTGGGATTGCTGTTGGGGTTTCATTTTATCCCATTGAAagtgctgggt                            >  2:225729/1‑136 (MQ=255)
                                                                                                                 aTCCGACGGAGTCGTTGGCGTTGTTTCTTTTTACATTCTTTTTCGTCTTCATATGAAAGGTTTTAGTGAGGCTTAAACGAACCAGGCGTTTTTTCGGATTACTCGTGCTGTTTAATTTTCTACAATTCAAGCTGCGCTGt                            >  2:2007703/1‑140 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTGTTTTTGCATTCTTTTTATTCTTCATATGAACGTTTTTAGTCAGGCTTAAACGAAGCAGGCGGTTTTTGGGATTGCGCTTGGTGGTTGATTTTATCCAATTGAAGCGGGTCTGttttttt                      >  2:2339922/1‑140 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:2054084/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:2297857/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCGTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:346024/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  2:867017/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  2:2076107/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  2:1522346/140‑1 (MQ=255)
                                                                                                                         gAGTCGGTGGCGTTCTTTCTTTTTCCATTCTTTCTCTTCTTCCTATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  2:572480/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  2:249291/140‑1 (MQ=255)
                                                                                                                            tCGGTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  2:2163965/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:1626884/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:518418/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:1217424/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCGTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:2370481/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633919‑634197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑