Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943595,1770TG25.2% 206.6 / 15.4 112V21V (GTT→GTG) EO946_RS03130MMPL family transporter
Reads supporting (aligned to +/- strand):  ref base T (31/52);  new base G (28/0);  total (60/52)
Fisher's exact test for biased strand distribution p-value = 5.73e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 117 total aligned reads displayed.

ATGAGAAACACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTATCGTCT  >  NZ_CP034943/595039‑595316
                                                                                                                                          |                                                                                                                                           
aTGAGAAACACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGttt                                                                                                                                            >  1:811711/1‑140 (MQ=255)
aTGAGAAACACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGttt                                                                                                                                            >  1:2101049/1‑140 (MQ=255)
  gagaAACACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTg                                                                                                                                          >  2:479160/1‑140 (MQ=255)
  gagaAACACTTAAATACTCTCATAGAGATATTAACCATTATAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGACTGAGAGCAATCATCAAATTCAATTGGGCAATTGCAGCGGTTATCTTATCACTTCGCGTAGTGTTg                                                                                                                                          >  2:1226970/1‑140 (MQ=255)
     aaaCACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTgtgt                                                                                                                                       >  1:1413574/1‑140 (MQ=255)
     aaaCACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAgt                                                                                                                                       >  1:604087/1‑140 (MQ=255)
     aaaCACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAgt                                                                                                                                       >  1:860260/1‑140 (MQ=255)
     aaaCACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGAgt                                                                                                                                       >  2:1846353/1‑140 (MQ=255)
        cacTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGTggttg                                                                                                                                    >  1:57516/1‑140 (MQ=255)
         acTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAgtttgt                                                                                                                                   <  2:1734534/140‑1 (MQ=255)
         acTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAgtttgt                                                                                                                                   <  1:1817411/140‑1 (MQ=255)
         acTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTGAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAgtttgt                                                                                                                                   <  2:599091/140‑1 (MQ=255)
          cTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGATGATATTCTGCATAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGAAGCGGTTATATTAGCACTTAACGTCGATTTTAttttgtt                                                                                                                                  >  1:122270/1‑140 (MQ=255)
             aaaTTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGGGTTTGttttg                                                                                                                               >  1:1435448/1‑139 (MQ=255)
               aTTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTTTGTTTGTTTtctc                                                                                                                             >  2:50801/1‑140 (MQ=255)
                ttCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTcc                                                                                                                            <  2:260776/140‑1 (MQ=255)
                ttCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGACTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTcc                                                                                                                            <  1:105169/140‑1 (MQ=255)
                   tATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTTTGTTTGTTTTTTGCGaa                                                                                                                         >  1:228415/1‑140 (MQ=255)
                   tATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGAgtt                                                                                                                                      >  2:877551/1‑127 (MQ=255)
                     tCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGAGTTTGTTTTCTCCGAACt                                                                                                                       >  2:878298/1‑140 (MQ=255)
                             atatTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTTATTTTGTTTTGTACGAACTTAAAGGAg                                                                                                               >  1:1416803/1‑140 (MQ=255)
                             atatTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGTTTTTGTTTTATGCGTACtttaaggtg                                                                                                               >  1:1078232/1‑133 (MQ=255)
                             atatTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAg                                                                                                               <  2:153067/140‑1 (MQ=255)
                             atatTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTTAGTTTGTTTTTTCCGGAATTAACagag                                                                                                               >  1:1104099/1‑140 (MQ=255)
                               atTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCACATTCAAGTGGGCAATTGGAGCGGTTCTATTAGCCCGTACCGTCGTCTGGGGGTTGGTTTGTGCGAACTGTACGGAGcg                                                                                                             >  2:1388911/1‑139 (MQ=255)
                               atTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTGATATTAGCACTTACCGTCGTTTTGAGTTTTTTTTAGCCGCACTTaaacgggcg                                                                                                             >  1:1689026/1‑133 (MQ=255)
                                  cACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGc                                                                                                          <  1:966810/140‑1 (MQ=255)
                                  cACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTATACGAACGTAAAGGAGCTGGc                                                                                                          >  2:557813/1‑140 (MQ=255)
                                   aCCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGTGTTTTTTTTGTCCGTACTTAACGGAGCTGGcc                                                                                                         >  1:2075299/1‑140 (MQ=255)
                                   aCCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGTGTTTGTTTTGTACGAACTTAAAGGAGCGGGcc                                                                                                         >  1:533216/1‑140 (MQ=255)
                                   aCCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGATTTTTTTTTATACGAAATTAAATGATCTGGcc                                                                                                         >  1:1991283/1‑140 (MQ=255)
                                     cATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCaa                                                                                                       >  2:891910/1‑140 (MQ=255)
                                       ttCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTTAGTTTGTTTTCTCCGAACTTAAACGAGCTGGCCacac                                                                                                     >  2:932130/1‑137 (MQ=255)
                                          tAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTTATTTTTTTTTGTCCGAAAATAACGGAGCTGGCCAATGaaa                                                                                                  >  1:349464/1‑140 (MQ=255)
                                          tAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTTAGTTTTTTTTCTACGAACTTAACGGAGCTGGCCAATaaaa                                                                                                  >  2:966810/1‑140 (MQ=255)
                                               aGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAgggg                                                                                             <  2:1445063/140‑1 (MQ=255)
                                               aGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAgggg                                                                                             <  1:891910/140‑1 (MQ=255)
                                                    aTTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTTAGTTTTTTTTCTCCGAACTTAAACGAGCTGGCCAATCAAAATGGGCCGGc                                                                                        >  1:462762/1‑140 (MQ=255)
                                                       tAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCa                                                                                     <  2:811711/140‑1 (MQ=255)
                                                       tAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCa                                                                                     <  1:176605/140‑1 (MQ=255)
                                                       tAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCa                                                                                     <  2:604087/140‑1 (MQ=255)
                                                                    tCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGATTTTTTTTTATCCGAACTTAAAGGAGCTGGCCAATAAAAAGGGGCAGGCCCACCTGCCTGCAGAt                                                                        >  2:1835578/1‑140 (MQ=255)
                                                                     cTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATg                                                                       <  1:1158916/140‑1 (MQ=255)
                                                                     cTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATg                                                                       <  1:2044470/140‑1 (MQ=255)
                                                                     cTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATg                                                                       <  2:2101049/140‑1 (MQ=255)
                                                                     cTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATg                                                                       <  1:1403714/140‑1 (MQ=255)
                                                                     cTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATg                                                                       <  1:328822/140‑1 (MQ=255)
                                                                     cTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTGTGTGTTTTTTTTGTCCGTACTTAAAGGAGCTGGCCAATCCAAAGGGGCAGGCGCACCTTCCTGCAGATg                                                                       >  1:372693/1‑140 (MQ=255)
                                                                      tGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGc                                                                      >  2:1983908/1‑140 (MQ=255)
                                                                      tGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGAGTTTTTTTTATCCGAACATAACGGAGCTGGCCAATCAAAAGGGGCCGGCCCACCTTCCTGCAGAttc                                                                      >  2:557635/1‑138 (MQ=255)
                                                                       gCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTTAGTTTGTTTTCTCCCAACGTAACGGAGCTGGCCCATCCAAAGGGGCAGGCCCAGCTTCCTGCAGATGCt                                                                     >  2:1855162/1‑140 (MQ=255)
                                                                           aaTGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGTTTTTTTTTTTTGCGCAATTATAGGAGCTGGGCCATCAAAAAGGGCCGGCCCAGCTTCCTGCAGATGCTGttt                                                                 >  1:1094307/1‑140 (MQ=255)
                                                                           aaTGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGTGTTTTTTTTGTCCGAAATTAACCGCGCTGGCCCATCAAAAGGGGCCGGCCCACCGTCCTGCGGATGCTGttt                                                                 >  1:2049454/1‑140 (MQ=255)
                                                                                gagCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGAGTTTTTTTTCTGCGAACATAACGGCGCTGGCCAATGAAAAGGGGCAGGCCCAGCTTCCAGGACATGCTGTTTCAGaa                                                            >  2:1659401/1‑140 (MQ=255)
                                                                                gagCAATCATCAAATTCAAGTGGGCAATTCCAGCGGTTATATTAGCACTTACCCTCGTGTTGACGTTGTTTTCTCCGACATTTACCGAGCTGGCCAATCCAAACGGGCCGGCCCCGCTTCGTGCCGTTGCTGGTTCACaa                                                            >  2:1656524/1‑140 (MQ=255)
                                                                                    aaTCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTTAGTTTTTTTTATGCGAAAAAAAAGCTGAGGGCCCAACAAAATGGGCACGCCCCGCTTCCAGCACATGGTGTTTTAGaaacac                                                        >  1:1776857/1‑137 (MQ=255)
                                                                                    aaTCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGAGTTTGTTTTGTACGAACTTAAAGGAGCTGGGCAATCAAAAGGGGCCGGCCCCCCGTGCTGGACATGCTGGTTGTGAAagag                                                        >  1:1088438/1‑140 (MQ=255)
                                                                                     atcatcAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGGCAATAAAAAGGGGCAGGCCCAGCTTCCGGCAGATGCTGTTTCAGAAAGAGc                                                       >  2:2036726/1‑140 (MQ=255)
                                                                                     atcatcAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCaaa                                                                                                  <  1:2036031/97‑1 (MQ=255)
                                                                                     atcatcAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCaaa                                                                                                  >  2:2036031/1‑97 (MQ=255)
                                                                                     atcatcAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTATCCGAACTTAAAGGAGCTGGCCAATAAAAATGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAAAGc                                                       >  1:2018580/1‑140 (MQ=255)
                                                                                     atcatcAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTGTTGTGTTTGTTTTGTCCGAACATAACCGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATTCTGTTTCAGAAAGAGc                                                       >  1:1677165/1‑140 (MQ=255)
                                                                                           aaaTTCAAGTGGGCAATTGCAGCGGTTATATTATCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGc                                                 <  2:1224940/140‑1 (MQ=255)
                                                                                           aaaTTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGc                                                 <  1:1639286/140‑1 (MQ=255)
                                                                                           aaaTTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGc                                                 <  2:85760/140‑1 (MQ=255)
                                                                                           aaaTTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGc                                                 <  2:1843555/140‑1 (MQ=255)
                                                                                           aaaTGCAAGGGGGCAAGTGCAGCGGTTATAGTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGc                                                 <  2:1583961/140‑1 (MQ=255)
                                                                                                  aGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTTTTTTCTGCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCCGGCCCAGCTTCCGGCAGATGCTGTTTCAGAAATCGCAACAGCCATGTTa                                          >  2:1120328/1‑140 (MQ=255)
                                                                                                   gTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGTGTTTTTTTTTTGCGAACTTAAAGGAGCTGGCCAATAAAAATGGGCAGGCCCAGCATCCTGCAGATGCTGTTTGAGAAACAGCAAATGCCATTTTaa                                         >  1:1983225/1‑140 (MQ=255)
                                                                                                            tGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCgg                                <  2:1416803/140‑1 (MQ=255)
                                                                                                            tGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCgg                                <  2:1104099/140‑1 (MQ=255)
                                                                                                            tGCAGCGGTTATATTAGCAATTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCgg                                <  2:1030519/140‑1 (MQ=255)
                                                                                                              cAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGga                              <  1:479160/140‑1 (MQ=255)
                                                                                                                gCGGTTATATTAGCACTTACCGTCGTGTTTATTTTTTTTTATCCGGACTTAAACGATCTGGCCCAACAAAAGGGGCCGGCCCACCGTCCTGCACATGCTGTTTCAGAAAGAGCCAATGGCACTTTAAAAAAAGCgggcgc                            >  1:720364/1‑137 (MQ=255)
                                                                                                                 cGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGagaa                           <  2:349464/140‑1 (MQ=255)
                                                                                                                   gTTATATTAGCACTTACCGTCGTGTTGGGTTTGTTTTATCCGAACTTAAACGAGCTGGCCAAACAAAAGGGGCCGGCCCCCCCTCCAGCACATGGTGTGTCAGAAAGAGCAAAAGCCATTTTAAAAAAAGCGGGcgaaga                         >  2:111116/1‑140 (MQ=255)
                                                                                                                   gTTATATTAGCACTTACCGTCGTGTTGAGTTTGTTTTATCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCGTCCTGCAGATGCTGTTTCAGAAATAGCACAAGCCCTTTTAAAACAACCGGGagaaga                         >  2:1121908/1‑140 (MQ=255)
                                                                                                                     agtatTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACTGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACa                       <  1:1664785/138‑1 (MQ=255)
                                                                                                                          tAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACaataat                  <  2:1654799/140‑1 (MQ=255)
                                                                                                                          tAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACaataat                  <  2:1173469/140‑1 (MQ=255)
                                                                                                                             cACTTACCGTCGTTTTGATTTTGGTTTAACCGAACATAACTGAGATGGCCAAAAAAAAGGGGCAGGCACAGCTTACTGCAGATGAGGTTTGAGAAAAATCAAATGCAAATTTAAAAAAAGCTGGAGAAGACaaaaaatag               >  2:2047456/1‑136 (MQ=255)
                                                                                                                              aCTTACCGTCGTTTTGAGTTTTTTTTGTCCGAAAATAAAGGAGCTGGCCAAACAAAAGGGGCACGCCCAGCTTACATCAGATTCTGTTTCAGAAAAAGCAAAATCCAATTTAAAAAAATCGGGAGAAGACaataaataga              >  1:444407/1‑135 (MQ=255)
                                                                                                                              aCTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGa              <  2:286428/140‑1 (MQ=255)
                                                                                                                              aCTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGa              <  1:1983908/140‑1 (MQ=255)
                                                                                                                              aCTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCGTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGa              <  1:2089542/140‑1 (MQ=255)
                                                                                                                               cTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGAt             <  2:372693/140‑1 (MQ=255)
                                                                                                                               cTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGAt             <  2:1413574/140‑1 (MQ=255)
                                                                                                                                 tACCGTCGTTTTGGGGTTGTTTTCTCCGAACTTAACGGAGCTGGCCCAACAAAAGGGGCCGGCCCAGCTTCCAGCCCATGCTGTGTCAGAAAGAGCAAAAGCCAATTTAAAACAAGCGGGAGAAGACACAAATTAGATCa           >  2:666673/1‑140 (MQ=255)
                                                                                                                                 tACCGTCGTGTTGTGTTTGTTTTCTCCGAACTTAAACGAGCGGGCCAAACAAAAGGGGCAGGCCCAGCTTACGGCAGATGCTGTTTGAGAAAGATCAAATGCCATTTTAAAAAAAGAGGGGGAAGAAAAAAAATCGATCa           >  2:301676/1‑140 (MQ=255)
                                                                                                                                  aCCGTCGTTTTGAGTTTGTTTTGTCCGAACTTAACGGAGCTGGCCAATCAAAATGGGCAGGCCCAGCGTCCTGCAGTTGCTTTTTCAGAAATATCAAATGCCATTTTAAAAAAATCGGGAGACGTAAATAATTCGATCat          >  2:1992174/1‑139 (MQ=255)
                                                                                                                                  aCCGTCGTGTTGTGTTTTTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCACCTTCCTGCAGATGCTGTTTCAGAAAGACCAAAAGCCATTTTAAAACAAGCGGGAGAAGAAAATAATTCGATAAg          >  2:1206483/1‑140 (MQ=255)
                                                                                                                                    cgtcgtTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTa        <  2:533216/140‑1 (MQ=255)
                                                                                                                                    cgtcgtTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTa        <  2:1991283/140‑1 (MQ=255)
                                                                                                                                    cgtcgtTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTa        <  2:2075299/140‑1 (MQ=255)
                                                                                                                                     gtcgtTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTAt       <  2:57516/140‑1 (MQ=255)
                                                                                                                                     gtcgtTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTAt       <  1:878298/140‑1 (MQ=255)
                                                                                                                                        gtTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAACAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTATCGt    <  1:932130/140‑1 (MQ=255)
                                                                                                                                        gtTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTATCGt    <  2:462762/140‑1 (MQ=255)
                                                                                                                                        gtTTTGAGTTTGTATTCTCCGAACTTAACTGAGCTGGCATATCAAAAGGTGCAGGCCGAGCTTCCTGCAGATGCTGTTTCAGAAATTGCAAATTCCATTTTAAAACAAGCGGGATAAGAAAATAATTCGATCAGTATCGt    <  1:283004/140‑1 (MQ=255)
                                                                                                                                          tttGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCACTCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTATCGTCt  <  2:2011785/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
ATGAGAAACACTTAAATTCTATCATAGAGATATTCACCATTCTAAAAAGCAAATTTAAAGGAGGAGATTCTGCAGAATGAGAGCAATCATCAAATTCAAGTGGGCAATTGCAGCGGTTATATTAGCACTTACCGTCGTTTTGAGTTTGTTTTCTCCGAACTTAACGGAGCTGGCCAATCAAAAGGGGCAGGCCCAGCTTCCTGCAGATGCTGTTTCAGAAAGAGCAAATGCCATTTTAAAACAAGCGGGAGAAGACAATAATTCGATCAGTATCGTCT  >  NZ_CP034943/595039‑595316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑