| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,406,966 | +T | intergenic (+325/‑1049) | RPPX_15185 → / → RPPX_15195 | chemotaxis protein CheY/peptide chain release factor 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,406,966 | 1 | . | T | 99.4% | 1323.8 / NA | 351 | intergenic (+325/‑1049) | RPPX_15185/RPPX_15195 | chemotaxis protein CheY/peptide chain release factor 2 |
| Reads supporting (aligned to +/- strand): ref base . (0/0); major base T (169/180); minor base G (0/2); total (169/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 366 total aligned reads displayed.
ATCGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑CCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTGAC > CP009974/3406816‑3407110 | aTCGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGaca > 1:6296002/1‑151 (MQ=255)aTCGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGaca > 1:6159639/1‑151 (MQ=255) cGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGacatc < 2:4649606/151‑3 (MQ=255) cGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGacatc > 1:7127201/1‑149 (MQ=255) gACTTCCACTTCTGTGCCGCCCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑tcc < 2:876423/151‑1 (MQ=255) gACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑tcc > 1:7012915/1‑151 (MQ=255) aCTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑tccc < 1:472869/151‑2 (MQ=255) cTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑tcccg < 2:6200671/151‑3 (MQ=255) tCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGCCGGCTTGACCCTGGTGCGTGAGTACCGCATCAACCCGGTGACTCACGCCATCCCGat > 2:1925522/1‑151 (MQ=255) tCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGat < 2:380608/151‑1 (MQ=255) tCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGat < 1:648943/151‑1 (MQ=255) tCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGat < 1:3678955/151‑1 (MQ=255) cACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGatca > 1:4021967/1‑151 (MQ=255) aCTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGatcat < 1:863132/151‑1 (MQ=255) aCTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGatcat > 2:5170142/1‑151 (MQ=255) aCTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGatcat > 2:1968006/1‑151 (MQ=255) cTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGatcatc < 1:1020183/151‑1 (MQ=255) cTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTc < 1:1376058/151‑1 (MQ=255) cTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTc > 1:1607219/1‑151 (MQ=255) cTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTc > 1:1730182/1‑151 (MQ=255) cTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTc < 1:244564/151‑1 (MQ=255) gtgCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCt > 1:3377478/1‑151 (MQ=255) ccGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTc > 1:2302131/1‑151 (MQ=255) cGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCg < 2:2008067/151‑1 (MQ=255) cGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCg < 1:6894339/151‑1 (MQ=255) cccGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGAcc < 1:723226/151‑1 (MQ=255) cccGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGAcc < 1:6575130/151‑1 (MQ=255) cGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCaa < 2:33265/151‑1 (MQ=255) gCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGCGCATCGTCCTGTCGACCAAg > 2:3556997/1‑151 (MQ=255) gCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCacg > 2:5024002/1‑149 (MQ=255) gCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAg > 1:3517780/1‑151 (MQ=255) gCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAc‑c > 1:1888862/1‑151 (MQ=255) cGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAc‑cc < 2:2338607/151‑1 (MQ=255) ggTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCg > 1:505966/1‑151 (MQ=255) tGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTTGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGtc > 2:1718402/1‑150 (MQ=255) ggCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTg < 2:7233952/151‑1 (MQ=255) ggCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAag > 1:4995865/1‑151 (MQ=255) cATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGt > 2:2944439/1‑151 (MQ=255) tGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGAGCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGc < 2:6374228/151‑1 (MQ=255) aacAAGACTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCAt < 2:1337696/149‑1 (MQ=255) aaGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTg > 1:2911459/1‑151 (MQ=255) aGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTgc < 2:5778779/151‑1 (MQ=255) gCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTgcc > 1:6774958/1‑151 (MQ=255) ccTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTgccg > 2:6116647/1‑151 (MQ=255) cTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTgccgc < 1:4342918/151‑1 (MQ=255) tACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTgccgcc < 1:3191149/151‑1 (MQ=255) cGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCgg > 1:5711962/1‑151 (MQ=255) ggTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCggg > 2:5568441/1‑151 (MQ=255) tCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGc < 1:5825132/151‑1 (MQ=255) cttcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACg < 2:3308720/151‑1 (MQ=255) tcAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGAt > 1:4130923/1‑151 (MQ=255) aCCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCt < 1:528547/151‑1 (MQ=255) aCCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGCCCAACGCTTcccc > 2:1576404/1‑150 (MQ=255) gATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTc < 2:3240319/151‑1 (MQ=255) agcATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCa < 2:6856200/149‑1 (MQ=255) tCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAAc > 1:4364999/1‑137 (MQ=255) tCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAAc < 2:4364999/137‑1 (MQ=255) tCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCaa < 1:3023393/151‑1 (MQ=255) aTGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGc > 2:2324599/1‑151 (MQ=255) ctggcctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGcc > 1:986325/1‑151 (MQ=255) ctggcctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGcc < 2:4234245/151‑1 (MQ=255) ggcctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCGAACGATTATCTGGTCACGCTGCCTg > 1:2788279/1‑151 (MQ=255) ggcctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTg > 1:6404786/1‑151 (MQ=255) gcctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGa > 1:150509/1‑151 (MQ=255) cctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGac > 2:3882147/1‑151 (MQ=255) ctggACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAACGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAATCTTCCTGaca > 2:671173/1‑151 (MQ=255) gACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCa > 2:1066542/1‑151 (MQ=255) gACGGCTTGACACTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCa < 2:2176151/151‑1 (MQ=255) aCGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCAt < 1:5594932/151‑1 (MQ=255) ggCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCg > 1:2529021/1‑151 (MQ=255) gCTTGACCCTGGTGCGTGCGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGa < 2:3063150/151‑1 (MQ=255) gCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGa > 1:797219/1‑151 (MQ=255) cTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGaa < 2:2469492/151‑1 (MQ=255) ttGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAAc < 2:2642450/151‑1 (MQ=255) tGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATACCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACt < 2:6320731/151‑1 (MQ=255) ccTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACtggtg < 1:1141421/151‑1 (MQ=255) tGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGc < 2:2404001/151‑1 (MQ=255) tGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGc < 1:2324599/151‑1 (MQ=255) gTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCAc < 1:6261990/151‑1 (MQ=255) tGCGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCCATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACg < 2:2827635/151‑1 (MQ=255) ggCGGGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACg < 2:3654034/150‑1 (MQ=255) cGTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCa > 1:4439536/1‑151 (MQ=255) gTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCAt < 2:5855489/151‑1 (MQ=255) gTGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCAt > 1:4862228/1‑151 (MQ=255) tGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATc < 1:5881437/151‑1 (MQ=255) tGAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATc > 1:52159/1‑151 (MQ=255) gAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGACTCCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATc < 2:727624/151‑1 (MQ=255) gAGTACCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATcc < 2:6092169/151‑1 (MQ=255) aCCGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTa > 2:5084509/1‑151 (MQ=255) ccGCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTAc < 1:205651/151‑1 (MQ=255) gCAACAACCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCa < 1:390503/151‑1 (MQ=255) aacaacCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACt > 2:1195263/1‑151 (MQ=255) caacCCGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTcg < 1:4576666/151‑1 (MQ=255) cGGTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTc < 2:7012915/151‑1 (MQ=255) ggTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTcc < 2:5950380/151‑1 (MQ=255) gTGACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCt < 1:5352759/151‑1 (MQ=255) gACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTAc > 1:2690865/1‑151 (MQ=255) gACTCAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTAc < 2:4553231/151‑1 (MQ=255) cAGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTGa < 2:4069566/151‑1 (MQ=255) aGGACATCCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTGAc < 2:531082/151‑1 (MQ=255) | ATCGACTTCCACTTCTGTGCCGACCCGCACCAGGCGGTGGCCCAGGCCATGCGCATCAAGCCTACGGTCATTCTTCAGGACCTGATCATGCCTGGCCTGGACGGCTTGACCCTGGTGCGTGAGTACCGCAACAACCCGGTGACTCAGGACA‑CCCGATCATCGTCCTGTCGACCAAGGAAGAC‑CCGTTGGTAAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTACCACTCGCGCTCCTACCTGAC > CP009974/3406816‑3407110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |