Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 1,343,208 Δ2,581 bp RPPX_05930RPPX_05935 RPPX_05930, RPPX_05935

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 1343208 1345788 2581 378 [0] [0] 380 RPPX_05930–RPPX_05935 RPPX_05930,RPPX_05935

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 13432070 (0.000)362 (1.060) 205/282 0.0 100% intergenic (‑184/‑180) RPPX_05925/RPPX_05930 hypothetical protein/integrase
?CP009974 1345789 = 0 (0.000)intergenic (+112/+815) RPPX_05935/RPPX_05940 ATPase AAA/DNA‑binding protein

Only 100 of 406 total aligned reads displayed.

GCTTGCCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/1343049‑1343207
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtagtgGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCC  >  CP009974/1345789‑1345938
                                                                                                                                                                                                                                                                                                                     
GCTTGCCTTTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTAC                                                                                                                                                                <  1:5179034/151‑1
 CTTGCCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACA                                                                                                                                                               <  1:5309748/151‑1
  TTGCCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTAGAG                                                                                                                                                              >  2:4231279/1‑151
   TGCCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGG                                                                                                                                                             <  2:3166879/151‑1
   TGCCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGG                                                                                                                                                             >  1:2628637/1‑151
    GCCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGT                                                                                                                                                            >  2:2839362/1‑151
     CCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTA                                                                                                                                                           >  2:6585334/1‑151
      CATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAG                                                                                                                                                          <  1:6324290/151‑1
       ATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGT                                                                                                                                                         >  2:1224194/1‑151
         TTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGG                                                                                                                                                       <  1:2300596/151‑1
            TCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCA                                                                                                                                                    >  1:4484586/1‑151
                CTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCG                                                                                                                                                >  2:3824298/1‑151
                 cCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGC                                                                                                                                               <  2:2278860/150‑1
                  CCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCGGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCAGCGACTACACACAGGGTCGGTGCAGCTGGGCGTCCGGTTCCCGACTTTCGCAAAGTGACTACTCACAGGTAGTGGGCAAGCGCC                                                                                                                                              >  2:2132042/1‑151
                   CTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCT                                                                                                                                             >  1:5798848/1‑151
                    TAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTC                                                                                                                                            >  2:3386181/1‑151
                             CTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGA                                                                                                                                   >  2:3637768/1‑151
                             CTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGA                                                                                                                                   <  1:4138692/151‑1
                                TCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTC                                                                                                                                <  2:5634555/151‑1
                                      GCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGGCTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCT                                                                                                                          <  2:610516/151‑1
                                        GCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTA                                                                                                                        <  2:7137996/151‑1
                                          CTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGC                                                                                                                      >  1:3014889/1‑151
                                           TCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCG                                                                                                                     >  2:1271341/1‑151
                                            CCAGGCTGGTGACAAAGAAAGCCCCGCTCGGTGGCAGTGCATCGACTACTCAGAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGG                                                                                                                    <  1:4300185/151‑1
                                            CCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGG                                                                                                                    >  1:1227324/1‑151
                                              AGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTA                                                                                                                  <  2:5275027/151‑1
                                                   GGTGACAAATAACCCCCCGCTCCGGGCCAGTGCATCGACTACACACAGCGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGA                                                                                                             <  1:5236648/151‑1
                                                       ACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAG                                                                                                         <  1:1868153/151‑1
                                                         atAGAAAACGCCGCTCGGGGGCAGTGCCTCGACTCCACACAGGGTCGGTGCAGCTGGGCGTCGCGTTCCCGACTTTCGCGAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGAT                                                                                                       <  2:5828490/149‑1
                                                            GAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGA                                                                                                    >  1:5025146/1‑151
                                                               AACCCCGCTCGGGGGCAGTGCAGCGAGTGGACGCAGGGTCGGTGCAGCTGGGCGTCGGGTTCGCGGCTTGCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACG                                                                                                 <  2:5701416/151‑1
                                                                ACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGC                                                                                                >  1:6773981/1‑151
                                                                 CCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCT                                                                                               <  2:1137227/151‑1
                                                                  CCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTG                                                                                              >  2:176280/1‑151
                                                                    nGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTC                                                                                            >  1:2107858/2‑151
                                                                    CGCGCGGGGGCAGTGCATCGACGACACACGGGGTCGGTGCAGCTGGGCGGCGGGTTCCGGAATTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGGAGCTGAGAAGATGGAACGCTGTC                                                                                            <  2:3964264/151‑1
                                                                      CTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAA                                                                                          >  1:2896000/1‑151
                                                                       TCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAA                                                                                         >  1:5425860/1‑151
                                                                       TCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAA                                                                                         <  1:1551524/151‑1
                                                                       TCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCGGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGGTGgcgaa                                                                                         >  2:2998195/1‑146
                                                                        CGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAA                                                                                        >  2:2905762/1‑151
                                                                         GGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCCAAAA                                                                                       <  2:5965502/151‑1
                                                                         GGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAA                                                                                       <  1:3242350/151‑1
                                                                          GGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAAT                                                                                      >  1:2420089/1‑151
                                                                           GGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATA                                                                                     <  1:6229926/151‑1
                                                                           GGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATA                                                                                     >  1:3561349/1‑151
                                                                             GCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATT                                                                                   <  1:3924730/151‑1
                                                                                  GCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGT                                                                              >  2:2452449/1‑151
                                                                                    ATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTAT                                                                            <  1:2690367/151‑1
                                                                                      CGACTACACACGGGGTCGGTGCAGCTGGGCGTCTGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCGGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGT                                                                          <  2:2036623/151‑1
                                                                                          TACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCA                                                                      >  2:6915555/1‑151
                                                                                           ACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAA                                                                     >  1:1050265/1‑151
                                                                                                 gGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCa                                                               <  2:6284349/150‑2
                                                                                                 AGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGCAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCC                                                               >  2:5445794/1‑151
                                                                                                 AGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCC                                                               <  2:102361/151‑1
                                                                                                 AGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCC                                                               <  2:4868016/151‑1
                                                                                                  GGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCA                                                              <  2:819065/151‑1
                                                                                                   GGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAG                                                             >  2:4371216/1‑151
                                                                                                     TCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCT                                                           >  1:1911100/1‑151
                                                                                                      CGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTC                                                          >  2:1567820/1‑151
                                                                                                      CGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTC                                                          >  1:5575605/1‑151
                                                                                                      CGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTC                                                          >  2:3538934/1‑151
                                                                                                          GCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAG                                                      <  1:815931/151‑1
                                                                                                           CAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGT                                                     >  2:1860273/1‑151
                                                                                                            AGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTC                                                    >  2:3131375/1‑151
                                                                                                             GCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCT                                                   <  1:6585334/151‑1
                                                                                                              gTGGGCGTCGGGTGCCCGACTTTCGCAAAGTGACTACTTACAGGTACTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTG                                                  <  2:4490338/150‑1
                                                                                                                    GTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAG                                            <  1:6464881/151‑1
                                                                                                                       GGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGA                                         >  1:132662/1‑151
                                                                                                                        GGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGAT                                        <  2:2667538/151‑1
                                                                                                                         GTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATC                                       >  1:2376306/1‑151
                                                                                                                         GTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATC                                       >  1:4030197/1‑151
                                                                                                                         GTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATC                                       >  1:5356770/1‑151
                                                                                                                            CCCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGCGATCGGC                                    >  2:6744321/1‑151
                                                                                                                             CCGACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCT                                   >  1:1172762/1‑151
                                                                                                                                ACTTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGAT                                <  2:6837625/151‑1
                                                                                                                                  TTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAACATATTGAGGTATGTAGCAATGCTCCAGCCCTCAGTCTGATGCAGGGATCGACTGATCA                              >  2:6164406/1‑151
                                                                                                                                  TTTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCA                              >  2:4129519/1‑151
                                                                                                                                   TTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAA                             >  2:1378221/1‑151
                                                                                                                                   TTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAA                             <  1:3386181/151‑1
                                                                                                                                   TTCGCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAA                             <  1:4617923/151‑1
                                                                                                                                      GCAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAA                          >  1:277677/1‑151
                                                                                                                                       CAAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAG                         <  2:4101191/151‑1
                                                                                                                                        AAAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGC                        <  1:7070915/151‑1
                                                                                                                                         AAGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCG                       <  1:6071391/151‑1
                                                                                                                                          AGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCACTGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGC                      >  2:6504355/1‑151
                                                                                                                                          AGTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTATGATGCAGGGACCGGCTGATCAAGAAGCGC                      >  2:2571126/1‑151
                                                                                                                                           GTGACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCT                     >  1:5637232/1‑151
                                                                                                                                              ACTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTAT                  >  1:68635/1‑151
                                                                                                                                               CTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGACGATGGAACGCTGTCACAAATATTGAGGCATGTAGCAATGCTCCAGCTCTCAGTCTGATCCAGGGCTCGGCTCATCAAGAAGCGCTTATC                 >  2:3776350/1‑151
                                                                                                                                               CTACTTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATC                 <  1:6995307/151‑1
                                                                                                                                                   TTACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATG                                               >  1:3798312/1‑117
                                                                                                                                                    TACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGC            >  2:7087569/1‑151
                                                                                                                                                    TACAGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATAGTGAGGTATGTAGCAATGCTCCCGCTCGCAGTCTGATGCAGGGATCGGCTGAGCAAGCAGCGCTTATCGTCGC            >  2:6457716/1‑151
                                                                                                                                                      CAGGTAGTGCGCAAGCGCCTCTGCCAACGATTCCTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTACGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCc          >  2:653565/1‑150
                                                                                                                                                       AGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGA         >  1:3146678/1‑151
                                                                                                                                                       AGGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGA         >  1:6827045/1‑151
                                                                                                                                                        GGTAGTGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGAT        >  2:4523884/1‑151
                                                                                                                                                             TGGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATC   <  1:1606483/151‑1
                                                                                                                                                              GGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCC  >  2:5143305/1‑151
                                                                                                                                                                                                                                                                                                                     
GCTTGCCATTTTTCTGCTCCTAGCTAGGGCTTTCATGGGCGCCTCCAGGCTGGTGACAAAGAAAACCCCGCTCGGGGGCAGTGCATCGACTACACACAGGGTCGGTGCAGCTGGGCGTCGGGTTCCCGACTTTCGCAAAGTGACTACTTACAGGTAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/1343049‑1343207
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtagtgGGCAAGCGCCTCTGCCAACGATTCTTCGCTTAGCGGTAGCTGAGAAGATGGAACGCTGTCAAAAATATTGAGGTATGTAGCAATGCTCCAGCTCTCAGTCTGATGCAGGGATCGGCTGATCAAGAAGCGCTTATCGTCGCCGATCAATCC  >  CP009974/1345789‑1345938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.