BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	3763892 =	115 (0.320)	133 (0.610)	77/182	5.8	79.1%	intergenic (‑225/+284)	RPPX_16805/RPPX_16810	protease HtpX/aminotransferase
*	?	CP009974	3764115 =	1 (0.000)	133 (0.610)	77/182	5.8	79.1%	intergenic (‑448/+61)	RPPX_16805/RPPX_16810	protease HtpX/aminotransferase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 128 total aligned reads displayed.

TCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATCCCAC  >  CP009974/3763742‑3764042

 cGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgag                                                                                                                                                       >  1:1196012/1‑151 (MQ=255)

 cGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgag                                                                                                                                                       >  2:696755/1‑151 (MQ=255)

 cGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgag                                                                                                                                                       <  1:5571942/151‑1 (MQ=255)

 cGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgag                                                                                                                                                       >  1:186693/1‑151 (MQ=255)

  ggtgcaCTATTTCAAACTGTGTACGGCGGAGTATCGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgaga                                                                                                                                                      <  1:553967/146‑1 (MQ=255)

  gggggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgaga                                                                                                                                                      >  1:6175235/1‑151 (MQ=255)

  gggggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgaga                                                                                                                                                      >  1:1634698/1‑151 (MQ=255)

  gggggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgaga                                                                                                                                                      <  1:1655868/151‑1 (MQ=255)

  gggggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTgaga                                                                                                                                                      >  1:3670228/1‑151 (MQ=255)

   ggggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGAt                                                                                                                                                     >  2:4788512/1‑151 (MQ=255)

   ggggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGAt                                                                                                                                                     >  2:1023739/1‑151 (MQ=255)

    gggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGCGGATGGCGTGGGGGCTGTGGGATAGATCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTTGCTCCGGTGAGATc                                                                                                                                                    >  1:200721/1‑151 (MQ=255)

     ggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCg                                                                                                                                                   <  2:5707270/151‑1 (MQ=255)

     ggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCg                                                                                                                                                   >  1:3703760/1‑151 (MQ=255)

     ggACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCg                                                                                                                                                   <  1:2782967/151‑1 (MQ=255)

     ggACTATGGCGAGCTGGGTGCGGGGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCg                                                                                                                                                   <  2:3695937/151‑1 (MQ=255)

        cTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAgc                                                                                                                                                >  1:412678/1‑151 (MQ=255)

         tATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAgcg                                                                                                                                               <  2:6695410/151‑1 (MQ=255)

         tATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAgcg                                                                                                                                               <  1:5129327/151‑1 (MQ=255)

          aTTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAgcgc                                                                                                                                              <  1:5395856/151‑1 (MQ=255)

           tttCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGcgcc                                                                                                                                             >  2:6502140/1‑151 (MQ=255)

            ttCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGcgccg                                                                                                                                            <  2:6503927/151‑1 (MQ=255)

             tCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGcgccgc                                                                                                                                           <  1:7166244/151‑1 (MQ=255)

               aaaCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGcgccgcgc                                                                                                                                         <  1:2047359/151‑3 (MQ=255)

               aaaCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGccgccc                                                                                                                                         <  1:3846855/151‑1 (MQ=255)

                aaCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGccgcccg                                                                                                                                        >  2:1420774/1‑151 (MQ=255)

                aaCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGccgcccg                                                                                                                                        >  2:1184742/1‑151 (MQ=255)

                 aCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGccgcccgc                                                                                                                                       >  2:1514161/1‑151 (MQ=255)

                 aCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGccgcccgc                                                                                                                                       <  1:5766326/151‑1 (MQ=255)

                 aCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGccgcccgc                                                                                                                                       <  2:3777119/151‑1 (MQ=255)

                   tgtgTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCcgcgc                                                                                                                                     >  2:3288947/1‑151 (MQ=255)

                   tgtgTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCcgcgc                                                                                                                                     >  2:3927169/1‑151 (MQ=255)

                   tgtgTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCcgcgc                                                                                                                                     <  1:428470/151‑1 (MQ=255)

                   tgtgTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGCGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCcgcgc                                                                                                                                     >  2:3667769/1‑151 (MQ=255)

                     tgtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCgcgg                                                                                                                                   >  2:4273925/1‑151 (MQ=255)

                     tgtACGGAGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGCGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCgcgggcgg                                                                                                                                   <  1:644644/151‑1 (MQ=255)

                     tgtAAGGAGGAGTATAGCAGAGGCTGGCGTGGGTGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGccgcgcgggagg                                                                                                                                   <  1:644357/151‑6 (MQ=255)

                      gtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCGCGggcggc                                                                                                                                  >  1:6042962/1‑151 (MQ=255)

                      gtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCgcggc                                                                                                                                  <  2:5196931/151‑1 (MQ=255)

                       tACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCgcggcg                                                                                                                                 <  2:2897798/151‑1 (MQ=255)

                       tACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCgcggcg                                                                                                                                 <  2:2223747/151‑1 (MQ=255)

                        aCGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGgcgc                                                                                                                                >  1:1156804/1‑151 (MQ=255)

                         cggcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCt                                                                                                                               <  2:2426283/151‑1 (MQ=255)

                          ggcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCtc                                                                                                                              <  1:424187/151‑2 (MQ=255)

                          ggcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTCGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCtc                                                                                                                              >  1:7245020/1‑150 (MQ=255)

                           gcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCtcg                                                                                                                             <  2:1148931/151‑3 (MQ=255)

                           gcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCtcg                                                                                                                             >  2:1028889/1‑149 (MQ=255)

                           gcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTc                                                                                                                             <  2:3177225/151‑1 (MQ=255)

                           gcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTc                                                                                                                             <  1:1031985/151‑1 (MQ=255)

                            gggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTcg                                                                                                                            <  2:3383248/150‑1 (MQ=255)

                            cggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTcg                                                                                                                            >  1:4484902/1‑151 (MQ=255)

                             ggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCtcgat                                                                                                                           >  2:4043433/1‑147 (MQ=255)

                             ggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTcgc                                                                                                                           <  2:5844138/151‑1 (MQ=255)

                              gAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTcgcg                                                                                                                          >  1:5448334/1‑151 (MQ=255)

                               aGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCtcgatct                                                                                                                         <  2:5972897/151‑7 (MQ=255)

                                gTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCggg                                                                                                                        >  2:1121441/1‑151 (MQ=255)

                                gTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCggg                                                                                                                        >  1:6298459/1‑151 (MQ=255)

                                gTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGGTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCggg                                                                                                                        <  2:4961648/151‑1 (MQ=255)

                                 tATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGt                                                                                                                       <  1:5912931/151‑1 (MQ=255)

                                   tGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTaa                                                                                                                     <  1:530650/151‑1 (MQ=255)

                                   tGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTaa                                                                                                                     <  1:5427518/151‑1 (MQ=255)

                                   tGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTaa                                                                                                                     <  1:5856606/151‑1 (MQ=255)

                                   gggCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTaa                                                                                                                     <  2:2836276/150‑1 (MQ=255)

                                       agagGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAAccc                                                                                                                 <  1:6133830/151‑1 (MQ=255)

                                        aagGATGGCGGGGGGGATGTGCGAGAGGGCGATGCAGGATGGAAGAAACATTCGGCTGGGGGTTGCGTCAAGCCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGGGCCGATCGCGCGGCGCTTCGCGGGTAAACCCg                                                                                                                <  2:4221296/150‑1 (MQ=37)

                                         gggATGGCGTGGGGGCTGTGGGATAGGGCGTTGCAGGTGGTAAGAAACATTCGGCTTGGGGTGGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGGTTCGCGGGTAAACCCGc                                                                                                               <  2:2869395/150‑1 (MQ=38)

                                           gATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTc                                                                                                             <  1:266226/151‑1 (MQ=255)

                                              ggCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTa                                                                                                          <  2:1074906/151‑1 (MQ=255)

                                               gCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTGAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTAc                                                                                                         <  2:5046942/151‑1 (MQ=255)

                                               gCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTAc                                                                                                         <  1:506419/151‑1 (MQ=255)

                                                cGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACg                                                                                                        <  1:268678/151‑1 (MQ=255)

                                                  gggggggTGTGGGATAGAGCGTTGCAGGATGTCAGAAACATTCGGCTTGGGGTTGAGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACgtt                                                                                                      <  2:2334527/150‑1 (MQ=255)

                                                  ggggggCTGTGGGGTAGGGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACgtt                                                                                                      <  2:280220/150‑1 (MQ=255)

                                                       gCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACgtttgttt                                                                                                 >  2:2605813/1‑151 (MQ=255)

                                                         tgtgGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCg                                                                                               <  2:418941/151‑1 (MQ=255)

                                                          gtgGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCgg                                                                                              >  2:5179129/1‑151 (MQ=255)

                                                           gggggTAGAGCGTTGCAGGGTGTAGGAGGCATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCgga                                                                                             <  2:1696644/150‑2 (MQ=37)

                                                               aTAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaa                                                                                         <  1:7204404/151‑2 (MQ=255)

                                                                tggagCGTTGCGGGATGTAAGAAGCATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaat                                                                                        <  2:3973693/149‑3 (MQ=255)

                                                                 agagCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaatt                                                                                       <  1:2729743/151‑4 (MQ=255)

                                                                 agagCGTGGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaatt                                                                                       <  2:3978107/151‑4 (MQ=255)

                                                                   agCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaattat                                                                                     <  1:17255/151‑6 (MQ=255)

                                                                   agCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaattat                                                                                     <  1:5894657/151‑6 (MQ=255)

                                                                    gCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCTGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaattatg                                                                                    <  2:5178955/151‑7 (MQ=255)

                                                                     cGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAGCCCGCTCCTACGTTTGTTTCGGACCaattatgc                                                                                   <  1:5080193/151‑8 (MQ=255)

                                                                     cGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaattatgc                                                                                   <  2:291531/151‑8 (MQ=255)

                                                                     cGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGACCaattatgc                                                                                   <  2:2752501/151‑8 (MQ=255)

                                                                          cAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAAcc                                                                                                                  <  2:1762215/115‑1 (MQ=255)

                                                                                                                                               ggggcgcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCaa         <  1:1063219/144‑1 (MQ=255)

                                                                                                                                               ggggcgcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCaa         <  2:520218/144‑1 (MQ=255)

                                                                                                                                                 ggcgcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAAt       <  2:5061230/146‑1 (MQ=255)

                                                                                                                                                  gggcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTGAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATc      <  2:3229610/147‑1 (MQ=255)

                                                                                                                                                  gcgcagaTCGAGCGCCGCCCGGGCGGCGCTTCGCGGGTACACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGGGCCAGGAGCGCGCGATCGCCTTGTTCGGACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATc      <  2:651760/147‑1 (MQ=17)

                                                                                                                                                   cgcagagCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATcc     <  2:1046310/148‑1 (MQ=255)

                                                                                                                                                   cgcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATcc     <  1:696759/148‑1 (MQ=255)

                                                                                                                                                   cgcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATcc     <  2:6926771/148‑1 (MQ=255)

                                                                                                                                                   cgcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATcc     <  2:804597/148‑1 (MQ=255)

                                                                                                                                                    gcagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATccc    <  1:1425871/149‑1 (MQ=255)

                                                                                                                                                     cagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATCCca   <  1:6074355/150‑1 (MQ=255)

                                                                                                                                                      agaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATCCcac  <  1:5522502/151‑1 (MQ=255)

TCGGGGGACTATTTCAAACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGTTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTCCATCCTGTGCCAGGAGCGCGCGATCGCCTTGTTCGTACGACGCGATATCGAGCCATGCGCCAGGGCGTTCGCGCGCAAATCCCAC  >  CP009974/3763742‑3764042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.