BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	2,756,352	Δ2,603 bp		[RPPX_12250]–RPPX_12260	[RPPX_12250], RPPX_12255, RPPX_12260

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	2756352–2758948	2758954	7–2603	349 [0]	[0] 345	[RPPX_12250]–RPPX_12260	[RPPX_12250],RPPX_12255,RPPX_12260

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 2756351	0 (0.000)	332 (0.960)	182/286	0.4	100%	coding (13/318 nt)	RPPX_12250	hypothetical protein
*	?	CP009974	2758955 =	0 (0.000)	332 (0.960)	182/286	0.4	100%	intergenic (‑211/‑1459)	RPPX_12260/RPPX_12270	integrase/membrane protein

Only 100 of 349 total aligned reads displayed.

CATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTT  >  CP009974/2756201‑2756498

cATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACGATCGCTACGCACCGTATGTGCGATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAATCGTC                                                                                                                                                     <  2:5948329‑M1/151‑1 (MQ=255)

cATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTC                                                                                                                                                     <  2:1225064‑M1/151‑1 (MQ=255)

cATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTC                                                                                                                                                     <  2:2301684‑M1/151‑1 (MQ=255)

  tCCAGCCCGGGAACGGTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCGGTCCACAACGCACTGATGCTATAGTTCGCCCCACCGTCgc                                                                                                                                                   >  2:3881445‑M1/1‑149 (MQ=255)

     aGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaa                                                                                                                                                >  2:3139233‑M1/1‑146 (MQ=255)

       cccGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatg                                                                                                                                              <  1:3319598‑M1/151‑8 (MQ=255)

         cGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgac                                                                                                                                            <  1:6676266‑M1/151‑10 (MQ=255)

          gggAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacg                                                                                                                                           >  1:5980541‑M1/1‑141 (MQ=255)

              aCGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcga                                                                                                                                       >  1:1773527‑M1/1‑137 (MQ=255)

                gTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatg                                                                                                                                     >  2:6603271‑M1/1‑135 (MQ=255)

                gTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatg                                                                                                                                     <  1:98260‑M1/151‑17 (MQ=255)

                 ttttCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatga                                                                                                                                    <  2:4444180‑M1/151‑18 (MQ=255)

                   ttCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgact                                                                                                                                  <  2:6313935‑M1/151‑20 (MQ=255)

                    tCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgactt                                                                                                                                 >  2:2460210‑M1/1‑131 (MQ=255)

                    tCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgactt                                                                                                                                 >  2:4156563‑M1/1‑131 (MQ=255)

                     cTGCTTCGAGAACGCCGGCGAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttg                                                                                                                                <  2:302064‑M1/151‑22 (MQ=255)

                     cTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttg                                                                                                                                <  2:3571412‑M1/151‑22 (MQ=255)

                      tGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGCTGCTGTAGTTCGCCGAAGCGTCgcccatgacggcgatgacctgt                                                                                                                               >  2:3680252‑M1/1‑129 (MQ=255)

                      tGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgt                                                                                                                               <  1:5551682‑M1/151‑23 (MQ=255)

                       gCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtc                                                                                                                              <  1:4406428‑M1/151‑24 (MQ=255)

                           cGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttc                                                                                                                          >  1:1167338‑M1/1‑124 (MQ=255)

                            gagaACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcg                                                                                                                         <  2:5221184‑M1/151‑29 (MQ=255)

                             agaACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgg                                                                                                                        <  1:1321046‑M1/151‑30 (MQ=255)

                                aCGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCcccaatgacggcgatgacttgtcgttcgggtt                                                                                                                     >  1:906387‑M1/1‑119 (MQ=255)

                                 cGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttc                                                                                                                    >  1:1815227‑M1/1‑118 (MQ=255)

                                 cGCCGGCAAACCAGCGCAACGCACCGTATGTGCCATTGTTGATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttc                                                                                                                    <  2:6824566‑M1/151‑34 (MQ=255)

                                   gcgGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctg                                                                                                                  <  2:3767840‑M1/150‑36 (MQ=255)

                                   ccGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctg                                                                                                                  <  1:35062‑M1/151‑36 (MQ=255)

                                   ccGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctg                                                                                                                  >  2:567736‑M1/1‑116 (MQ=255)

                                   ccGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctg                                                                                                                  >  2:5726672‑M1/1‑116 (MQ=255)

                                   ccGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctg                                                                                                                  <  1:1005133‑M1/151‑36 (MQ=255)

                                    cGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgc                                                                                                                 >  1:4970676‑M1/1‑115 (MQ=255)

                                    cGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgc                                                                                                                 >  2:1361838‑M1/1‑115 (MQ=255)

                                    cGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggtcctgc                                                                                                                 >  2:6162347‑M1/1‑115 (MQ=255)

                                       cAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgag                                                                                                              >  2:4193499‑M1/1‑112 (MQ=255)

                                         aaCCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagtt                                                                                                            >  2:171420‑M1/1‑110 (MQ=255)

                                                      cACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgc                                                                                               >  1:2710233‑M1/1‑97 (MQ=255)

                                                       aCCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGTTGTAGTTCCAGGAACCGTCgccaatgacggcgatgacttgtcgtgcgggttctgcgaggtgcagcccaatggct                                                                                              >  2:4882641‑M1/1‑96 (MQ=255)

                                                       aCCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgct                                                                                              <  2:1580873‑M1/151‑56 (MQ=255)

                                                        ccGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctg                                                                                             <  2:3367743‑M1/151‑57 (MQ=255)

                                                          gTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgca                                                                                           <  2:676702‑M1/151‑59 (MQ=255)

                                                           tATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcag                                                                                          <  1:222281‑M1/151‑60 (MQ=255)

                                                                     tGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaa                                                                                >  1:4930169‑M1/1‑82 (MQ=255)

                                                                      gTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaag                                                                               <  2:323323‑M1/151‑71 (MQ=255)

                                                                          aTGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagccca                                                                           >  1:5911107‑M1/1‑77 (MQ=255)

                                                                          aTGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagccca                                                                           <  1:3121964‑M1/151‑75 (MQ=255)

                                                                          aTGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagccca                                                                           >  2:5282603‑M1/1‑77 (MQ=255)

                                                                               cACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtcca                                                                      >  2:343924‑M1/1‑72 (MQ=255)

                                                                               cACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtcca                                                                      <  1:2336482‑M1/151‑80 (MQ=255)

                                                                               cACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtcca                                                                      >  2:3904429‑M1/1‑72 (MQ=255)

                                                                                aCGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccac                                                                     >  1:6282019‑M1/1‑71 (MQ=255)

                                                                                 cGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacc                                                                    <  1:5189447‑M1/151‑82 (MQ=255)

                                                                                 cGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacc                                                                    <  1:4686084‑M1/151‑82 (MQ=255)

                                                                                  gAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacca                                                                   <  2:5911107‑M1/151‑83 (MQ=255)

                                                                                  gAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccacca                                                                   >  2:1901994‑M1/1‑69 (MQ=255)

                                                                                    aGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagc                                                                 >  2:1884510‑M1/1‑67 (MQ=255)

                                                                                    aGATGGGGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagc                                                                 >  2:2635532‑M1/1‑67 (MQ=255)

                                                                                      aTGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcgg                                                               >  1:643616‑M1/1‑65 (MQ=255)

                                                                                          tggGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcaca                                                           <  1:370476‑M1/151‑91 (MQ=255)

                                                                                          tggGGATGTTCTACTGCGCTGCAGTCCACGACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgaggtgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcaca                                                           <  2:4605329‑M1/151‑91 (MQ=255)

                                                                                                tgttgtACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagta                                                     <  2:2081814‑M1/151‑97 (MQ=255)

                                                                                                 gttgtACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaa                                                    <  2:554559‑M1/151‑98 (MQ=255)

                                                                                                    gtACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatag                                                 >  1:1432760‑M1/1‑51 (MQ=255)

                                                                                                     tACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagc                                                <  1:3299242‑M1/151‑102 (MQ=255)

                                                                                                      aCTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagct                                               <  1:6492901‑M1/151‑103 (MQ=255)

                                                                                                       cTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagcta                                              >  1:7097933‑M1/1‑48 (MQ=255)

                                                                                                       cTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagcta                                              <  1:3969525‑M1/151‑104 (MQ=255)

                                                                                                           gcTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccag                                          <  1:5474256‑M1/151‑108 (MQ=255)

                                                                                                            cTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagg                                         >  1:6850241‑M1/1‑43 (MQ=255)

                                                                                                            cTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagg                                         >  1:1234658‑M1/1‑43 (MQ=255)

                                                                                                             tGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccaggg                                        >  1:2971558‑M1/1‑42 (MQ=255)

                                                                                                               cAGTCCACAACGCACTGATGCGGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggtt                                      <  2:5459513‑M1/151‑112 (MQ=255)

                                                                                                                aGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttg                                     <  2:862673‑M1/151‑113 (MQ=255)

                                                                                                                aGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttg                                     >  1:4018976‑M1/1‑39 (MQ=255)

                                                                                                                aGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttg                                     >  1:6361281‑M1/1‑39 (MQ=255)

                                                                                                                aGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttg                                     >  2:1842810‑M1/1‑39 (MQ=255)

                                                                                                                 gTCCAAAACGGACTGATGCGGTAGTTCGCCGAACCGTCgccagtgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgc                                    <  1:508892‑M1/151‑114 (MQ=255)

                                                                                                                   ccACAACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgc                                  >  2:6041482‑M1/1‑36 (MQ=255)

                                                                                                                     acaACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcat                                <  1:3817550‑M1/151‑118 (MQ=255)

                                                                                                                      caACGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatg                               >  1:4223435‑M1/1‑33 (MQ=255)

                                                                                                                       aaCGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgctgacttgtcgttcgggtcctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtcccccagcggcacagaaggaatcgctaccaggggtgcgcaggt                              >  2:2557559‑M1/1‑32 (MQ=255)

                                                                                                                       aaCGCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgt                              <  1:4168908‑M1/151‑120 (MQ=255)

                                                                                                                          gCACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttca                           <  2:6437283‑M1/151‑123 (MQ=255)

                                                                                                                           cACTGATGCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcag                          <  1:2557411‑M1/151‑124 (MQ=255)

                                                                                                                                  gCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcatgcgctgc                   >  1:1612064‑M1/1‑21 (MQ=255)

                                                                                                                                  gCTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgc                   <  1:1536606‑M1/151‑131 (MQ=255)

                                                                                                                                   cTGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgcc                  >  2:6591167‑M1/1‑20 (MQ=255)

                                                                                                                                    tGTAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgcca                 >  1:6924816‑M1/1‑19 (MQ=255)

                                                                                                                                      tAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaataggtaccagggttgcgcatgttcaggcgctgccaca               >  2:2897831‑M1/1‑17 (MQ=255)

                                                                                                                                      tAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccaca               >  1:286‑M1/1‑17 (MQ=255)

                                                                                                                                      tAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccaca               >  1:3593747‑M1/1‑17 (MQ=255)

                                                                                                                                      tAGTTCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccaaa               <  1:4338749‑M1/151‑135 (MQ=255)

                                                                                                                                         ttCGCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacattt            >  2:1326464‑M1/1‑14 (MQ=255)

                                                                                                                                            gCCGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttggg         >  1:5700964‑M1/1‑11 (MQ=255)

                                                                                                                                              cGAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatctgggcg       >  2:1994065‑M1/1‑9 (MQ=255)

                                                                                                                                               gAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcgg      >  2:4827642‑M1/1‑8 (MQ=255)

                                                                                                                                               gAACCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcgg      >  1:7027121‑M1/1‑8 (MQ=255)

                                                                                                                                                 aCCGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcggtc    <  2:761359‑M1/151‑146 (MQ=255)

                                                                                                                                                   cGTGgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcagcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcggtcgt  <  1:2817153‑M1/151‑148 (MQ=255)

                                                                                                                                                   cGTCgccaatgacggcgatgacttgtcgttcgggttctgcgagttgcaccccaattgctgcaggcagggcgaagcccagtccaccagcggcacagaagtaatagctaccagggttgcgcatgttcaggcgctgccacatttgggcggtcgt  >  1:4784435‑M1/1‑4 (MQ=255)

CATCCAGCCCGGGAACGTTTTCTGCTTCGAGAACGCCGGCAAACCATCGCAACGCACCGTATGTGCCATTGTTCATGATCACGAAGATGGTGGGGATGTTGTACTGCGCTGCAGTCCACAACGCACTGATGCTGTAGTTCGCCGAACCGTCTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTT  >  CP009974/2756201‑2756498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`