Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 2,913,100 Δ2,603 bp RPPX_12970–[RPPX_12980] RPPX_12970, RPPX_12975, [RPPX_12980]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 2913100–2915697 2915702 6–2603 365 [2] [0] 362 RPPX_12970–[RPPX_12980] RPPX_12970,RPPX_12975,[RPPX_12980]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 29130992 (0.010)337 (0.970) 187/286 0.3 99.7% intergenic (+953/+106) RPPX_12965/RPPX_12970 GABA permease/ATPase AAA
?CP009974 2915703 = 0 (0.000)coding (34/267 nt) RPPX_12980 hypothetical protein

Only 100 of 365 total aligned reads displayed.

CTCGGGTGCTGGCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTTGC  >  CP009974/2912949‑2913248
                                                                                                                                                      |                                                                                                                                                     
   gggTGCTGGCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggc                                                                                                                                                    >  1:1444369‑M1/1‑148 (MQ=255)
    ggTGCTGGCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggca                                                                                                                                                   <  1:1016707‑M1/151‑5 (MQ=255)
    ggTGCTGGCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggca                                                                                                                                                   >  2:3822646‑M1/1‑147 (MQ=255)
     gTGCTGGCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcag                                                                                                                                                  >  2:2515491‑M1/1‑146 (MQ=255)
      tGCTGGCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagc                                                                                                                                                 >  2:7054011‑M1/1‑145 (MQ=255)
           gCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgc                                                                                                                                            >  2:1649755‑M1/1‑140 (MQ=255)
           gCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgc                                                                                                                                            <  2:3588590‑M1/151‑12 (MQ=255)
             gtgtCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcag                                                                                                                                          >  1:1135313‑M1/1‑138 (MQ=255)
              tgtCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagg                                                                                                                                         >  2:2212684‑M1/1‑137 (MQ=255)
              tgtCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagg                                                                                                                                         >  2:3360283‑M1/1‑137 (MQ=255)
              tgtCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagg                                                                                                                                         <  1:281348‑M1/151‑15 (MQ=255)
               gtCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcaggg                                                                                                                                        <  1:2245705‑M1/151‑16 (MQ=255)
                tCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggc                                                                                                                                       <  1:3250122‑M1/151‑17 (MQ=255)
                     aTGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggac                                                                                                                                  <  2:177977‑M1/151‑22 (MQ=255)
                         gTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtgg                                                                                                                              >  1:5632207‑M1/1‑126 (MQ=255)
                         gTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtgg                                                                                                                              >  1:4765754‑M1/1‑126 (MQ=255)
                            gcgGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatg                                                                                                                           >  2:1318534‑M1/1‑123 (MQ=255)
                              ggATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgcggatgtt                                                                                                                         >  2:6242898‑M1/1‑121 (MQ=255)
                               gATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttc                                                                                                                        >  2:2120946‑M1/1‑120 (MQ=255)
                               gATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttc                                                                                                                        <  1:3669244‑M1/151‑32 (MQ=255)
                                aTTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcg                                                                                                                       <  2:2428127‑M1/151‑33 (MQ=255)
                                aTTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcg                                                                                                                       >  2:113721‑M1/1‑119 (MQ=255)
                                   gCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgc                                                                                                                    >  2:2617151‑M1/1‑116 (MQ=255)
                                   gCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagcgcaggacgtggatgttcgcgc                                                                                                                    >  2:550610‑M1/1‑116 (MQ=255)
                                    cAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcg                                                                                                                   >  1:2142954‑M1/1‑115 (MQ=255)
                                      ggTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgct                                                                                                                 >  2:1504456‑M1/1‑113 (MQ=255)
                                           tatCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgac                                                                                                            <  2:1935591‑M1/151‑44 (MQ=255)
                                            atCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacg                                                                                                           >  1:3156019‑M1/1‑107 (MQ=255)
                                               tcAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgcta                                                                                                        <  1:7084765‑M1/151‑48 (MQ=255)
                                                cAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctac                                                                                                       <  1:2630585‑M1/151‑49 (MQ=255)
                                                cAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctac                                                                                                       <  1:42535‑M1/151‑49 (MQ=255)
                                                 aaTCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctaca                                                                                                      >  1:3588782‑M1/1‑102 (MQ=255)
                                                 aaTCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctaca                                                                                                      <  2:4679977‑M1/151‑50 (MQ=255)
                                                  aTCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaa                                                                                                     >  2:6473417‑M1/1‑101 (MQ=255)
                                                  aTCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaa                                                                                                     >  1:6222397‑M1/1‑101 (MQ=255)
                                                       tCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgct                                                                                                >  2:1001944‑M1/1‑96 (MQ=255)
                                                       tCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgct                                                                                                <  1:6710381‑M1/151‑56 (MQ=255)
                                                       tCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgct                                                                                                >  1:2704600‑M1/1‑96 (MQ=255)
                                                          aaaTTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgc                                                                                             <  1:6471319‑M1/151‑59 (MQ=255)
                                                             tttCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttg                                                                                          <  1:866790‑M1/151‑62 (MQ=255)
                                                                 gCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGTTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgt                                                                                      >  1:289657‑M1/1‑86 (MQ=255)
                                                                   tGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgt                                                                                    <  1:5932551‑M1/151‑68 (MQ=255)
                                                                   tGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgt                                                                                    >  2:496053‑M1/1‑84 (MQ=255)
                                                                    tttgCATCTTTTTCAGTTTTGGATGACAATGCCGCCGCATGGAGCGTGATATGGATGAGCTGGGGTCTATCACTACGTCACGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcttgtt                                                                                   <  2:5194440‑M1/150‑69 (MQ=255)
                                                                    gTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgtt                                                                                   <  1:1931872‑M1/151‑69 (MQ=255)
                                                                     ttGCAGGTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGGGCGAGGTATGGATGAGCTGGGGTCTATCACTCCGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgatacaaccgcttgcttggcgtgttg                                                                                  <  2:539406‑M1/151‑70 (MQ=255)
                                                                     ttGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttg                                                                                  >  2:4389183‑M1/1‑82 (MQ=255)
                                                                     ttGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttg                                                                                  >  1:1534002‑M1/1‑82 (MQ=255)
                                                                      tGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgc                                                                                 <  1:7230313‑M1/151‑71 (MQ=255)
                                                                       gCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgct                                                                                <  2:3919504‑M1/151‑72 (MQ=255)
                                                                        cAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctg                                                                               >  2:6576931‑M1/1‑79 (MQ=255)
                                                                            tttCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatg                                                                           >  1:1351619‑M1/1‑75 (MQ=255)
                                                                            tttCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatg                                                                           <  2:605057‑M1/151‑77 (MQ=255)
                                                                                tAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttgg                                                                       <  2:4303258‑M1/151‑81 (MQ=255)
                                                                                   gTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcga                                                                    <  1:1634368‑M1/151‑84 (MQ=255)
                                                                                     tttGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagt                                                                  <  1:3879629‑M1/151‑86 (MQ=255)
                                                                                            gAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtg                                                           >  1:4395030‑M1/1‑59 (MQ=255)
                                                                                             aaaaTGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgc                                                          >  1:5305605‑M1/1‑58 (MQ=255)
                                                                                                   ccgccgCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggc                                                    >  2:4011474‑M1/1‑52 (MQ=255)
                                                                                                       cgcATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgc                                                >  1:4512545‑M1/1‑48 (MQ=255)
                                                                                                        gcATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgccgggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgct                                               <  1:1503165‑M1/151‑105 (MQ=255)
                                                                                                        gcATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgct                                               <  1:2981315‑M1/151‑105 (MQ=255)
                                                                                                         cATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctg                                              <  1:5136637‑M1/151‑106 (MQ=255)
                                                                                                         cATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctg                                              <  1:1761767‑M1/151‑106 (MQ=255)
                                                                                                          aTGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgc                                             <  1:5343324‑M1/151‑107 (MQ=255)
                                                                                                           tGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgcc                                            <  1:2399933‑M1/151‑108 (MQ=255)
                                                                                                            ggAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccg                                           <  2:2357454‑M1/151‑109 (MQ=255)
                                                                                                              aGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtt                                         >  2:1210722‑M1/1‑41 (MQ=255)
                                                                                                              aGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtt                                         <  2:1380986‑M1/151‑111 (MQ=255)
                                                                                                                    atatGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgc                                   <  2:1867415‑M1/151‑117 (MQ=255)
                                                                                                                     tatGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcg                                  <  1:1268212‑M1/151‑118 (MQ=255)
                                                                                                                     tatGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcg                                  <  2:734143‑M1/151‑118 (MQ=255)
                                                                                                                      atGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcgg                                 <  1:4912083‑M1/151‑119 (MQ=255)
                                                                                                                      atGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcgg                                 >  1:6607577‑M1/1‑33 (MQ=255)
                                                                                                                       tGGATGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggt                                <  1:6077545‑M1/151‑120 (MQ=255)
                                                                                                                          aTGAGCTGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgc                             <  1:5574732‑M1/151‑123 (MQ=255)
                                                                                                                                tGGGGTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccat                       >  2:5642063‑M1/1‑23 (MQ=255)
                                                                                                                                 ggggTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatc                      >  2:6614085‑M1/1‑22 (MQ=255)
                                                                                                                                  gggTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatct                     <  2:867738‑M1/151‑131 (MQ=255)
                                                                                                                                  gggTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatct                     >  1:5696237‑M1/1‑21 (MQ=255)
                                                                                                                                   ggTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctg                    <  1:6873104‑M1/151‑132 (MQ=255)
                                                                                                                                    gTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctgg                   <  2:3168303‑M1/151‑133 (MQ=255)
                                                                                                                                    gTCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctgg                   <  1:4613689‑M1/151‑133 (MQ=255)
                                                                                                                                     tCTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccctctggc                  >  2:6854138‑M1/1‑18 (MQ=255)
                                                                                                                                      cTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggct                 <  1:5849318‑M1/151‑135 (MQ=255)
                                                                                                                                      cTATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggct                 <  2:5305605‑M1/151‑135 (MQ=255)
                                                                                                                                       tATCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctg                <  2:4813073‑M1/151‑136 (MQ=255)
                                                                                                                                        aTCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctgg               <  2:5112941‑M1/151‑137 (MQ=255)
                                                                                                                                        aTCACTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctgg               >  2:7111414‑M1/1‑15 (MQ=255)
                                                                                                                                           aCTACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtga            <  2:1344283‑M1/151‑140 (MQ=255)
                                                                                                                                             tACGTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgact          >  1:3337854‑M1/1‑10 (MQ=255)
                                                                                                                                                gTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggggagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaa       >  2:4150841‑M1/1‑7 (MQ=255)
                                                                                                                                                gTCATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaa       <  2:2741086‑M1/151‑145 (MQ=255)
                                                                                                                                                 gcgtggggcaggggtggggggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaaa      <  2:3655632‑M1/148‑146 (MQ=255)
                                                                                                                                                  cATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaaac     >  1:4118939‑M1/1‑5 (MQ=255)
                                                                                                                                                  cATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaaac     >  2:6330831‑M1/1‑5 (MQ=255)
                                                                                                                                                  cATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaaac     <  1:496053‑M1/151‑147 (MQ=255)
                                                                                                                                                  cATGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaaac     <  1:6528107‑M1/151‑147 (MQ=255)
                                                                                                                                                    tGGggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaaacca   <  2:5819527‑M1/151‑149 (MQ=255)
                                                                                                                                                     ggggcagcggtgcagggcaggacgtggatgttcgcgcgctgcgacgctacaaccgcttgcttggcgtgttgctgaatgttggcgagtgggcgtgcataggcctgctgccgtttgttgcggttgctgccatctggctggtgactcaaaccaa  <  1:2024825‑M1/151‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CTCGGGTGCTGGCGTGTCAAAATGCGTCGCGGATTGCAGGTATTATCTCAATCTGTCAAAATTTCGCTGTTGCAGCTTTCTAAGTTTTGGATGAAAATGCCGCCGCATGGAGCGAGATATGGATGAGCTGGGGTCTATCACTACGTCATGGTGCGGATTCCACGCCATTCGGACACTCAGCCCACGCTGATCCGGACACCTGTTCCACGCTCATTCGGACAGGCAGTCGGAGCGCAGCGACGCAGGGGTGGCATTGTTAGTCCGGGTTGGCTGGCGTCGTCAATTTCTGCGTCCGTTTGC  >  CP009974/2912949‑2913248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑