Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 4,905,871 Δ2,603 bp RPPX_21790–RPPX_21795 RPPX_21790, RPPX_21795

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 4905871–4908466 4908473 8–2603 332 [0] [0] 333 RPPX_21790–RPPX_21795 RPPX_21790,RPPX_21795

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 49058700 (0.000)322 (0.930) 178/286 0.6 100% intergenic (+920/‑204) RPPX_21780/RPPX_21790 sugar kinase/integrase
?CP009974 4908474 = 0 (0.000)intergenic (+113/+1368) RPPX_21795/RPPX_21805 ATPase AAA/restriction endonuclease subunit R

Only 100 of 333 total aligned reads displayed.

GCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCATCGAGCTGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCAGGAGGCGGG  >  CP009974/4908328‑4908624
                                                                                                                                                  |                                                                                                                                                      
cgccgcaaatcttgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTc                                                                                                                                                    <  2:4210353‑M2/5‑1 (MQ=255)
   cgcaaatcttgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGAt                                                                                                                                                 <  1:1102754‑M2/8‑1 (MQ=255)
      aaatcttgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGc                                                                                                                                              >  1:1425080‑M2/141‑151 (MQ=255)
        atcttgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCAc                                                                                                                                            >  1:6755517‑M2/139‑151 (MQ=255)
        atcttgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCAc                                                                                                                                            >  2:1548383‑M2/139‑151 (MQ=255)
         tcttgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACt                                                                                                                                           >  2:6397231‑M2/138‑151 (MQ=255)
           ttgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgactggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCCCTgg                                                                                                                                         >  2:4034313‑M2/136‑151 (MQ=255)
            tgtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGa                                                                                                                                        <  1:3565916‑M2/17‑1 (MQ=255)
             gtcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGaa                                                                                                                                       >  1:1461804‑M2/134‑151 (MQ=255)
              tcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGaaa                                                                                                                                      <  1:6051334‑M2/19‑1 (MQ=255)
              tcgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGaaa                                                                                                                                      <  1:4218948‑M2/19‑1 (MQ=255)
               cgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAAc                                                                                                                                     <  1:5587438‑M2/20‑1 (MQ=255)
               cgacatcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAAc                                                                                                                                     >  1:4336935‑M2/132‑151 (MQ=255)
                   atcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCtt                                                                                                                                 <  1:780773‑M2/24‑1 (MQ=255)
                    tcatccatgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTc                                                                                                                                >  1:1539759‑M2/127‑151 (MQ=255)
                         cattagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCcggcg                                                                                                                           <  1:300522‑M2/30‑1 (MQ=255)
                         catgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCcggcg                                                                                                                           >  2:2031354‑M2/122‑151 (MQ=255)
                          atgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCcggcgg                                                                                                                          >  2:3840995‑M2/121‑151 (MQ=255)
                          atgagcttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGAGCGCACTGGAAACGCTTCaggcgg                                                                                                                          >  2:5439232‑M2/121‑151 (MQ=255)
                               cttggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGa                                                                                                                     <  2:101980‑M2/36‑1 (MQ=255)
                                 tggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGt                                                                                                                   >  1:6272918‑M2/114‑151 (MQ=255)
                                  ggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGTTTGAGTc                                                                                                                  >  1:1305861‑M2/113‑151 (MQ=255)
                                  ggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTc                                                                                                                  <  1:5219228‑M2/39‑1 (MQ=255)
                                  ggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTc                                                                                                                  <  1:3309292‑M2/39‑1 (MQ=255)
                                  ggtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTc                                                                                                                  >  1:6425132‑M2/113‑151 (MQ=255)
                                   gtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCa                                                                                                                 >  1:5437281‑M2/112‑151 (MQ=255)
                                   gtgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCa                                                                                                                 >  2:5847608‑M2/112‑151 (MQ=255)
                                   gggaggcggttgtttccgctggcgcgcccttggtcgtcgaaggcaactcggatggcctttagggtttcacgcatcggtacggaatggtcttcggtgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGGCa                                                                                                                 <  2:3751604‑M2/40‑1 (MQ=255)
                                    tgatgcgcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAg                                                                                                                <  1:3692699‑M2/41‑1 (MQ=255)
                                          gcttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGc                                                                                                          >  1:2736070‑M2/105‑151 (MQ=255)
                                           cttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGcc                                                                                                         <  2:6927804‑M2/48‑1 (MQ=255)
                                           cttgtttccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGcc                                                                                                         <  1:1017376‑M2/48‑1 (MQ=255)
                                                 tccactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGATAAc                                                                                                   >  2:1344206‑M2/98‑151 (MQ=255)
                                                   cactcgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACaa                                                                                                 <  1:6860375‑M2/56‑1 (MQ=255)
                                                       cgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGc                                                                                             >  2:6553807‑M2/92‑151 (MQ=255)
                                                       cgcgagcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCCCGATCGCACTGGAAACGCCTCCGGCGGATTGAGTCAGCCCTGCCGAAAACAAGGGc                                                                                             >  2:873278‑M2/92‑151 (MQ=255)
                                                           agcccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGt                                                                                         >  2:7230840‑M2/88‑151 (MQ=255)
                                                             cccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTcc                                                                                       >  2:6691939‑M2/86‑151 (MQ=255)
                                                              ccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACACGGGCAGGTCCa                                                                                      >  2:3647228‑M2/85‑151 (MQ=255)
                                                              ccttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGATCCa                                                                                      >  1:2801928‑M2/85‑151 (MQ=255)
                                                               cttgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCaa                                                                                     <  2:3403523‑M2/68‑1 (MQ=255)
                                                                 tgctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAg                                                                                   <  1:5821164‑M2/70‑1 (MQ=255)
                                                                  gctcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGc                                                                                  <  2:7164884‑M2/71‑1 (MQ=255)
                                                                    tcgtcgacggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCaa                                                                                <  2:4468124‑M2/73‑1 (MQ=255)
                                                                    tcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCaa                                                                                >  1:6484691‑M2/79‑151 (MQ=255)
                                                                    tcgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCaa                                                                                <  2:1996051‑M2/73‑1 (MQ=255)
                                                                     cgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAAc                                                                               >  2:6068205‑M2/78‑151 (MQ=255)
                                                                     cgtcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaaaggtcttcgctgcgcatctctcgagctGCCTCGATCGCACTGGCAACGCTTCCGGCGGATTGCGTCAGCCATGCCGAAAACCAGGGCCGGGCCAGCGCAAc                                                                               >  2:4864138‑M2/78‑151 (MQ=255)
                                                                       tcgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACgg                                                                             >  1:3083194‑M2/76‑151 (MQ=255)
                                                                        cgaaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGACTGAGCCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAacgcc                                                                            >  1:3189531‑M2/75‑149 (MQ=255)
                                                                          aaggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCt                                                                          >  1:5143917‑M2/73‑151 (MQ=255)
                                                                           aggcaactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTg                                                                         <  2:46623‑M2/80‑1 (MQ=255)
                                                                              caactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGt                                                                      >  1:1762994‑M2/69‑151 (MQ=255)
                                                                              caactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGt                                                                      >  1:3107490‑M2/69‑151 (MQ=255)
                                                                               aactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGtt                                                                     <  2:2632531‑M2/84‑1 (MQ=255)
                                                                               aactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGtt                                                                     <  2:183443‑M2/84‑1 (MQ=255)
                                                                               aactcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGtt                                                                     >  1:2475866‑M2/68‑151 (MQ=255)
                                                                               aactcgaatggcctttaggggttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGtt                                                                     <  2:5792926‑M2/84‑1 (MQ=255)
                                                                                actcgaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGCGTTg                                                                    >  2:4060274‑M2/67‑151 (MQ=255)
                                                                                    gaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTcc                                                                >  2:164685‑M2/63‑151 (MQ=255)
                                                                                    gaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTcc                                                                >  2:2098460‑M2/63‑151 (MQ=255)
                                                                                    gaatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTcc                                                                >  1:955756‑M2/63‑151 (MQ=255)
                                                                                     aatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAACGCAACGGTCTGAGTTGCTCCg                                                               <  1:1886650‑M2/90‑1 (MQ=255)
                                                                                     aatggcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCg                                                               >  2:2561927‑M2/62‑151 (MQ=255)
                                                                                         gcctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCg                                                           <  2:2903226‑M2/94‑1 (MQ=255)
                                                                                           ctttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGAc                                                         >  1:2692574‑M2/56‑151 (MQ=255)
                                                                                            tttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGAcc                                                        >  1:4499207‑M2/55‑151 (MQ=255)
                                                                                            tttagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGAcc                                                        <  1:4886311‑M2/97‑1 (MQ=255)
                                                                                              tagggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCgg                                                      >  2:4299722‑M2/53‑151 (MQ=255)
                                                                                               agggtttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGa                                                     <  2:1425080‑M2/100‑1 (MQ=255)
                                                                                                  ggttcacgcatcgttacgagatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGAttt                                                  <  1:2070330‑M2/103‑1 (MQ=255)
                                                                                                   tttcacgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTc                                                 >  1:5088657‑M2/48‑151 (MQ=255)
                                                                                                       acgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGaa                                             >  1:7084508‑M2/44‑151 (MQ=255)
                                                                                                        cgcatcgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGaaa                                            <  2:6272918‑M2/109‑1 (MQ=255)
                                                                                                             cgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTc                                       <  2:6492562‑M2/114‑1 (MQ=255)
                                                                                                             cgttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTc                                       <  2:4971440‑M2/114‑1 (MQ=255)
                                                                                                               ttacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGt                                     <  2:1145430‑M2/116‑1 (MQ=255)
                                                                                                                tacgaaatggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTa                                    <  1:6695361‑M2/117‑1 (MQ=255)
                                                                                                                      atggtgttcgctgcggatctgtcgagctGCCTCGGTCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGtt                              <  2:6821812‑M2/123‑1 (MQ=255)
                                                                                                                        ggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGtttt                            <  1:3428927‑M2/125‑1 (MQ=255)
                                                                                                                        ggtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGtttt                            <  1:4189214‑M2/125‑1 (MQ=255)
                                                                                                                         gtcttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTg                           <  1:2154273‑M2/126‑1 (MQ=255)
                                                                                                                           cttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTc                         >  1:699343‑M2/24‑151 (MQ=255)
                                                                                                                            ttcgctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTcc                        <  1:1714447‑M2/129‑1 (MQ=255)
                                                                                                                               gctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCgag                     >  1:4622591‑M2/20‑151 (MQ=255)
                                                                                                                                ctgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCgaga                    <  1:7179605‑M2/133‑1 (MQ=255)
                                                                                                                                 tgcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCAGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGagag                   >  2:5577172‑M2/18‑151 (MQ=255)
                                                                                                                                  gcggatctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAgg                  <  2:5272972‑M2/135‑1 (MQ=255)
                                                                                                                                   cgaggctgtcgcgctGCCTCGATCGCACTGGAACCGCTTCCGGCGGATTGAGTCACCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGt                 <  2:3563204‑M2/136‑1 (MQ=255)
                                                                                                                                    ggatctgtcgagctGCCTCGATCGCACTGGAAGCGCTTCCGGCGGATTGAGTCAGCGATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGtt                <  2:812936‑M2/137‑1 (MQ=255)
                                                                                                                                     gatctgtcaagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGTCCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGttt               <  2:6506932‑M2/138‑1 (MQ=255)
                                                                                                                                        ctgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGcc            >  1:5993295‑M2/11‑151 (MQ=255)
                                                                                                                                         tgtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCa           >  2:2210668‑M2/10‑151 (MQ=255)
                                                                                                                                         tgtcgagccGCCTCGATCGCACTGAAAACGCTTCCGGCGGATCCAGTCAGCCATGCCGAAAACCAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGCTTTCCGAAATGCTCGTACTGGCTTTGTCCGAGAGCTTTgccc           >  2:4105234‑M2/10‑150 (MQ=255)
                                                                                                                                          gtcgagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCag          <  2:3899253‑M2/143‑1 (MQ=255)
                                                                                                                                             gagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCaggag       >  1:5483689‑M2/6‑151 (MQ=255)
                                                                                                                                             gagctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCaggag       <  1:1147917‑M2/146‑1 (MQ=255)
                                                                                                                                              agctGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCaggagg      <  2:2330072‑M2/147‑1 (MQ=255)
                                                                                                                                                  gCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCAGGAggcggg  >  2:2804460/1‑151 (MQ=255)
                                                                                                                                                  gCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCAGGAggcggg  >  1:3841525/1‑151 (MQ=255)
                                                                                                                                                  |                                                                                                                                                      
GCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCATCGAGCTGCCTCGATCGCACTGGAAACGCTTCCGGCGGATTGAGTCAGCCATGCCGAAAACAAGGGCAGGTCCAAAGCAACGGTCTGAGTTGCTCCGTGCGACCGGATTTCCGAAATGCTCGTACTGGTTTTGTCCGAGAGGTTTGCCAGGAGGCGGG  >  CP009974/4908328‑4908624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑