Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,277,6710GA70.5% 445.4 / 288.9 411intergenic (+140/+98)RPPX_05635/RPPX_05640aldehyde dehydrogenase/mechanosensitive ion channel protein MscS
Reads supporting (aligned to +/- strand):  ref base G (43/76);  new base A (159/126);  total (206/205)
Fisher's exact test for biased strand distribution p-value = 4.52e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 434 total aligned reads displayed.

GCCTGGGCTGATATCGCAAGGAGCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCCCGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTGCACCAGCACCATGC  >  CP009974/1277521‑1277818
                                                                                                                                                      |                                                                                                                                                   
    gtgctagtatCGCGAGGAGCCGCGCTATGGCACCGGCCCTGCCGGTGCTCGCGGGTAAACCCGCTCCTCCGCGACGGCCTGTGTCCAACCCTCGACGTCTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGtggtgg                                                                                                                                                 <  2:3152042/144‑1 (MQ=17)
      gCTGATATCGCAAGGAGCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTggtggcg                                                                                                                                               <  1:951747/151‑1 (MQ=255)
         gATATCGCAAGGAGCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCa                                                                                                                                            <  2:179389/151‑1 (MQ=255)
               gCAAGGAGCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTg                                                                                                                                      <  1:6572974/151‑1 (MQ=255)
                 aaGGAGCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGaa                                                                                                                                    <  1:5536863/151‑1 (MQ=255)
                   ggAGCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAAcg                                                                                                                                  <  2:2288530/151‑1 (MQ=255)
                     ggCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAAcggc                                                                                                                                <  2:733079/150‑1 (MQ=255)
                       ccGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAAcggcgg                                                                                                                              >  1:7035779/1‑151 (MQ=255)
                         gcgTTATGGCACCGGCCCGGCCGGTGTTCGCGGGTAAACCCGCTCCTACGTGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGt                                                                                                                            <  2:6958012/151‑1 (MQ=14)
                           gTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTgg                                                                                                                          <  2:4606501/151‑1 (MQ=255)
                                  cACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTgg                                                                                                                   >  2:884096/1‑151 (MQ=255)
                                    ccGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGcc                                                                                                                 >  1:1866353/1‑151 (MQ=255)
                                             ggccctttCGCGGGTGACCCCGCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggcc                                                                                                        <  1:3827835/145‑1 (MQ=11)
                                             ggccctttCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGggcc                                                                                                        <  1:2259896/145‑1 (MQ=1)
                                             ggccctttCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGggcc                                                                                                        >  1:2052460/7‑151 (MQ=1)
                                             ccGGTGGTCGCGGGTAAACCCGCCCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggcc                                                                                                        <  2:5850155/151‑1 (MQ=255)
                                              gcccttgcgcgGGTGAACCCGCGCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggccg                                                                                                       <  2:3999536/144‑1 (MQ=11)
                                              gcccttccgcgGGGGAGCCCGCTCCCACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggccg                                                                                                       <  1:1300752/144‑1 (MQ=11)
                                              gcactttCGCGGGAGAACCCGCGCCTACACGACGGACTGAGTCCAACCTCCGGGGTGTGTCCACAACCCATCTGCGAAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggccg                                                                                                       <  2:283043/146‑1 (MQ=11)
                                               ggTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAgg                                                                                                           <  2:5401001/146‑1 (MQ=11)
                                               ggTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAgg                                                                                                           >  1:5401001/1‑146 (MQ=11)
                                               ccttttCGCGGGTGAACCCGCTCCTACACGACGGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGggccgg                                                                                                      <  2:1649823/147‑1 (MQ=11)
                                                gtgtTCGAGGGGAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCGCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggccggc                                                                                                     <  2:4176396/151‑1 (MQ=11)
                                                cctttCGCGGGTGAACCCGCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggccggc                                                                                                     >  1:6103075/4‑151 (MQ=11)
                                                   ttCGCGGGTGAACCCGCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGggccggcctc                                                                                                  >  1:4560546/1‑149 (MQ=11)
                                                      gcgGGTGAACCCGCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCCTTc                                                                                               >  2:2621026/1‑151 (MQ=11)
                                                       cgGGTGAACCCGCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGATATTGGCCAGCAGggccggcctcttcc                                                                                              >  1:1973657/1‑145 (MQ=11)
                                                        gggTGAACCCGCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGGGAACGGCGGGTGGAAATTGGCCAGCAGggccggcctcctcgc                                                                                             >  2:6810151/1‑144 (MQ=11)
                                                               cccGCTCCTACACGGGGGCCTGTGTCCAACCCGAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTaaa                                                                                      <  2:4484155/151‑1 (MQ=11)
                                                               cccGCTCCTACACGACGGCCTGCGTCCAACCCCCGGTGTGTGTCCACAACCCCTCTGCGCAGGACCGGGGTTACCCGCGGCGACGGTCGCGGCGGCAGCGGTGAAGGGCGGGCCGAAATTGGCCAGCCGGGCCCGGCTCGTCGCGGGCaaa                                                                                      >  2:4369022/1‑151 (MQ=2)
                                                                ccGCTCCTACACGGCGGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTCCGCGGGTAAAc                                                                                     >  2:571680/1‑151 (MQ=11)
                                                                 ggcgccTACACGGCGGCCTGTGTCGAACCCTCGAGGTGTGTCCGCCACGAGTCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAAcc                                                                                    <  2:6220307/147‑1 (MQ=11)
                                                                 cGCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAcc                                                                                    <  1:165985/151‑1 (MQ=11)
                                                                  gCTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAccc                                                                                   >  1:2766167/1‑151 (MQ=11)
                                                                   cTCCTACACGGCGGCCTGTGTCCAACCCCAGAGGTGTGTCAACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAAcccc                                                                                  >  2:6649006/1‑150 (MQ=11)
                                                                   cTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAGAcccc                                                                                  >  2:6350759/1‑150 (MQ=11)
                                                                   cTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCg                                                                                  >  2:2722100/1‑151 (MQ=11)
                                                                   cTCCTACACGACGGCCTGCGTCCAACCTCCGGTGTGTGTCCACAACCCATCTGCGCAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCg                                                                                  >  1:6926446/1‑151 (MQ=11)
                                                                      gtggacgacgGCCTGTGTCCAACCCGAGGGGTGTGTCCAGCACGAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTc                                                                               <  2:4717027/147‑1 (MQ=14)
                                                                      cTACACGGCGGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTc                                                                               >  1:1008509/1‑151 (MQ=11)
                                                                         gacgacgGCCTGTGTCCAACGCTCGACGTGGGTCCACCACCAATCTGCGTAGGGGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCta                                                                            <  1:5337823/150‑2 (MQ=11)
                                                                         cccgccgGCCTGTGTCCAACCCCAGTGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCta                                                                            <  2:1173828/146‑2 (MQ=14)
                                                                         cacGGCGGCCTGTGTCCAACCCTCGATGTGTGGCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCta                                                                            <  2:3248028/151‑2 (MQ=11)
                                                                         cacGGCGGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGGAAACCCGCGCCTg                                                                            >  2:5391684/1‑151 (MQ=11)
                                                                          acggcgGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGc                                                                           >  1:7151717/1‑151 (MQ=11)
                                                                          acggcgGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGc                                                                           >  1:1153703/1‑151 (MQ=11)
                                                                          acgccgGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCtac                                                                           <  1:6719260/151‑3 (MQ=14)
                                                                          acgacgGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCtac                                                                           <  1:5199936/151‑3 (MQ=255)
                                                                           cgacgGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCtaca                                                                          <  1:2624687/151‑4 (MQ=14)
                                                                           cgacgGCCTGTGCCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCtaca                                                                          <  1:4380785/151‑4 (MQ=14)
                                                                            gacgGCCTGTGTCCAACCCGCGAGGTGTGGCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCtacac                                                                         <  2:4576046/151‑5 (MQ=14)
                                                                            gacgGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCa                                                                         >  1:6449257/1‑151 (MQ=14)
                                                                             gcgGCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAg                                                                        <  2:645864/150‑1 (MQ=255)
                                                                             acgGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATTCGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCtacacg                                                                        >  1:2357075/1‑146 (MQ=255)
                                                                             acgGCCTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCtacacg                                                                        <  1:4951491/151‑6 (MQ=255)
                                                                               ggCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGcg                                                                      >  1:6386802/1‑150 (MQ=11)
                                                                               ggCCTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCt                                                                      >  1:3204621/1‑151 (MQ=14)
                                                                                 ccTGTGTCCAACCCTCGACGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCCGCCgg                                                                    >  1:5936309/1‑151 (MQ=14)
                                                                                  cTGTGTCCAACCCCAGAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGa                                                                   >  2:1342167/1‑151 (MQ=14)
                                                                                   tgtgTCCAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGAc                                                                  >  2:2141781/1‑151 (MQ=14)
                                                                                         cAACCCCAGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCCGCCGGCCAGcggc                                                            >  2:3485179/1‑148 (MQ=11)
                                                                                              ccagAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGa                                                       >  2:6392604/4‑151 (MQ=255)
                                                                                                agacgtgtgtCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATg                                                     <  1:4769064/147‑1 (MQ=255)
                                                                                                agAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATg                                                     >  1:2591712/2‑151 (MQ=255)
                                                                                                agAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATg                                                     >  2:2585228/2‑151 (MQ=255)
                                                                                                agAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATg                                                     >  2:7099650/2‑151 (MQ=255)
                                                                                                 gAGGTGTGTCCACCCCCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGc                                                    <  2:5936309/151‑1 (MQ=255)
                                                                                                 gAGGTGTGTCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCCATGc                                                    >  2:1856238/1‑151 (MQ=255)
                                                                                                     tgtgtCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTac                                                >  2:1237991/1‑151 (MQ=255)
                                                                                                     tgtgtCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTac                                                >  1:3588453/1‑151 (MQ=255)
                                                                                                       tgtCCACCACCAATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTacac                                              >  1:4979466/1‑151 (MQ=255)
                                                                                                            accaccaATCTGTGTGGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTTCTGTCAGCTGGACAGCCCCCCCGATGCCTACACCGACt                                         <  2:4911931/151‑1 (MQ=17)
                                                                                                              cccgattCTGTGTAGGCGCGGGTGTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCg                                       <  1:334960/145‑1 (MQ=18)
                                                                                                              caccaATCAGTGTAGGAGCGGGTTTACCCGCGAAGACGGTCGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCg                                       <  1:5811552/151‑1 (MQ=255)
                                                                                                                ccaATCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTc                                     >  2:2007649/1‑151 (MQ=255)
                                                                                                                 caATCTGCGTAGGAGCGGGTTTACCCGCAAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCa                                    <  2:1045821/151‑1 (MQ=255)
                                                                                                                   aTCTGTGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAgc                                  >  1:2916736/1‑151 (MQ=255)
                                                                                                                     cTGTGTAGGAGCGGGCTTACGCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAgccg                                <  1:2388999/151‑1 (MQ=255)
                                                                                                                      tctgTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGACCGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAgccgg                               <  1:4500647/148‑1 (MQ=255)
                                                                                                                       gtgTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAgccggc                              >  1:4055558/3‑151 (MQ=255)
                                                                                                                        cGTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAgccggcc                             <  1:307216/151‑1 (MQ=255)
                                                                                                                          tAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCcgc                           >  1:1190121/1‑151 (MQ=255)
                                                                                                                          tAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCcgc                           >  1:1085162/1‑151 (MQ=255)
                                                                                                                                 gggTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCa                                                                         <  1:3009859/98‑1 (MQ=18)
                                                                                                                                 gggTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGGAAACCCGCTCCTGCCa                                                                         >  2:3009859/1‑98 (MQ=255)
                                                                                                                                     ttACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTg                >  2:4849467/1‑151 (MQ=255)
                                                                                                                                      tACCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTgc               >  2:6507906/1‑151 (MQ=255)
                                                                                                                                       aCCCGCGAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTgca              >  1:1756247/1‑151 (MQ=255)
                                                                                                                                             gAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTgcccccgcc        >  2:3385481/1‑150 (MQ=255)
                                                                                                                                             gAATACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTgcaccagca        >  1:3680078/1‑151 (MQ=255)
                                                                                                                                              aaTACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTgcaccagcac       <  2:4979466/151‑1 (MQ=255)
                                                                                                                                              aaTACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTgcaccagcac       >  1:4667809/1‑151 (MQ=255)
                                                                                                                                               aTACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCgcgc                         <  1:2477689/132‑1 (MQ=255)
                                                                                                                                               aTACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCgcgc                         >  2:2477689/1‑132 (MQ=255)
                                                                                                                                               aTACGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTgcaccagcacc      >  1:161594/1‑151 (MQ=255)
                                                                                                                                                 aCGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTGCACCAGCACCAt    <  1:2192269/151‑1 (MQ=255)
                                                                                                                                                 aCGGTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTGCACCAGCACCAt    <  1:6223601/151‑1 (MQ=255)
                                                                                                                                                   ggTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTGCACCAGCACCATGc  >  2:5480073/1‑151 (MQ=255)
                                                                                                                                                   ggTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTGCACCAGCACCATGc  >  1:3759037/1‑151 (MQ=255)
                                                                                                                                                   ggTAGCGGCGGCAACAGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCCCCTGCACCAGCACCATGc  >  2:3086674/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
GCCTGGGCTGATATCGCAAGGAGCCGCGTTATGGCACCGGCCCTGCCGGTGTTCGCGGGTAAACCCGCTCCTACACGACGGCCTGTGTCCAACCCCCGAGGTGTGTCCACCACCAATCTGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGTGAACGGCGGGTGGAAATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTGCCAGCTGGACAGCCCACCCGATGCCTACACCGACTCGTCAGCCGGCCGCGCCCCCTCCTGCACCAGCACCATGC  >  CP009974/1277521‑1277818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑