Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 3,105,419 G→A intergenic (+140/+135) RPPX_13820 → / ← mscL ferredoxin‑NADP reductase/large‑conductance mechanosensitive channel

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,105,4190GA75.5% 788.1 / 227.1 374intergenic (+140/+135)RPPX_13820/mscLferredoxin‑NADP reductase/large‑conductance mechanosensitive channel
Reads supporting (aligned to +/- strand):  ref base G (31/60);  new base A (143/138);  total (176/198)
Fisher's exact test for biased strand distribution p-value = 5.49e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.92e-01

Only 100 of 396 total aligned reads displayed.

ACTACTGGTAAGACAATTGCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAATTTCAAGGCAAGCGA  >  CP009974/3105269‑3105566
                                                                                                                                                      |                                                                                                                                                   
actactGGTAAGACAATTGCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATtggtgg                                                                                                                                                     >  1:1034901/1‑151 (MQ=255)
            aCAATTGCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATc                                                                                                                                         <  1:3662504/151‑1 (MQ=255)
            aCAATTGCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATc                                                                                                                                         <  1:6466024/151‑1 (MQ=255)
                  gCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCggtggt                                                                                                                                   >  2:5194077/1‑151 (MQ=255)
                  gCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCggtggt                                                                                                                                   >  1:2163634/1‑151 (MQ=255)
                       cGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGac                                                                                                                              >  1:4533256/1‑151 (MQ=255)
                        gtggtgGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCGGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGaca                                                                                                                             <  2:3777059/148‑1 (MQ=255)
                        gTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACACCGGTGGTTGGaca                                                                                                                             >  1:5752814/1‑151 (MQ=255)
                            gcccacTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCTGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAgc                                                                                                                         <  1:5543686/146‑2 (MQ=11)
                             gggCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGgc                                                                                                                        >  1:6705611/1‑151 (MQ=255)
                             cgtcgtGTAGGAGCGGGTTCCCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCGCCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACCTCGGAGGTTGGACACAgcc                                                                                                                        <  1:4603897/146‑3 (MQ=11)
                             cgtcgtGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCGCCGTATTCGCGGTTAAACCCGCTCCTACACAGATTGGTGGTGGACACACCTCGGAGGTTGGACACAgcc                                                                                                                        >  2:1242112/6‑149 (MQ=11)
                             cgtcgtGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCGCCGTATTCGCGGGGAAACCCGCTCCTACACAGATTGGGGGTGGACACACCTCGGAGGTTGGACACAgcc                                                                                                                        >  2:6154682/6‑149 (MQ=11)
                              gtcgtGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCGCCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACCTCGGAGGTTGGACACAGccc                                                                                                                       >  1:7097347/5‑151 (MQ=11)
                              ccgtcgTAGGAGCGGGTTCACCCGCGAAAGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGgcc                                                                                                                       <  1:6572754/146‑1 (MQ=11)
                               tcgtGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCGCCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACCTCGGAGGTTGGACACAGcccg                                                                                                                      <  1:4772323/148‑1 (MQ=11)
                               gacTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCCTTCACTGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGccca                                                                                                                      <  2:3227256/149‑2 (MQ=11)
                                ccTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGgccgc                                                                                                                     >  1:3877114/1‑151 (MQ=255)
                                ccTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCTGGCCAATTTCCACCAGCCATTCACCGTTGCTGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGcccac                                                                                                                     <  2:1043755/151‑3 (MQ=11)
                                 cTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGgccgcc                                                                                                                    >  2:3105112/1‑151 (MQ=255)
                                 cTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGgccgcc                                                                                                                    <  2:3601514/151‑1 (MQ=255)
                                 cTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCTGCCGCCATCGTATTCGCGGGTACACCCGCTCCCACACAGATTCTTGTAGGACACATATCGGTGGTTGGACACAGcccact                                                                                                                    >  1:1767256/1‑148 (MQ=11)
                                  tGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCTGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAgcccactg                                                                                                                   <  1:5212231/151‑8 (MQ=11)
                                  tGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCCGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCCGTGGTTGGACACAGcccactt                                                                                                                   >  1:27383/1‑147 (MQ=11)
                                  tGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCGCCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACCTCGGAGGTTGGACACAGCccgccg                                                                                                                   <  1:757239/151‑1 (MQ=11)
                                  cgTAGGAGCGGGTTCACCCGCGAAAGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGGccgccg                                                                                                                   <  1:1974314/150‑1 (MQ=11)
                                   gTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCgt                                                                                                                  <  1:6181334/151‑1 (MQ=255)
                                    tAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCgtg                                                                                                                 >  2:258964/1‑151 (MQ=255)
                                    tAGGAGCGGGTTCACCCGCGAAAGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACATAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGGCTGCCgtg                                                                                                                 >  1:3053707/1‑151 (MQ=11)
                                          cgGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAg                                                                                                           <  1:5192393/151‑1 (MQ=255)
                                            ggTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCg                                                                                                         <  2:1443429/151‑1 (MQ=255)
                                             gTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCgg                                                                                                        <  1:6654757/151‑1 (MQ=255)
                                              ttCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCggg                                                                                                       >  1:5665712/1‑151 (MQ=255)
                                               tCACCCGCGAAAGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGGCCGCCGTGTAGGAGCGGGt                                                                                                      >  1:4127509/1‑151 (MQ=11)
                                                cACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGtt                                                                                                     >  1:5841601/1‑151 (MQ=19)
                                                    cgcgAAAGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACTGGCCGCCGTGGAGGAGCGCGTCTAcc                                                                                                 >  2:3370474/1‑151 (MQ=11)
                                                    cgcgAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACAGCGGTGGTTGGTCACAGGCCGCCGTGTAGTAGCGGGtctctc                                                                                                 >  2:863606/1‑146 (MQ=11)
                                                     gcgaggaggccggccCTGCTGGCCAATTTCCACCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCcgc                                                                                              <  2:6470773/144‑1 (MQ=11)
                                                       gaagaggccggccCTGCTGGCCAATTTCCACCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGa                                                                                            >  1:1486031/6‑151 (MQ=11)
                                                        aggaggcgggccCTGCTGGCCAATTTCCACCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaa                                                                                           <  2:6256088/147‑1 (MQ=11)
                                                        aaaGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGGCCGCCGTGTa                                                                                                               <  1:5327265/133‑1 (MQ=11)
                                                        aaaGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGGCCGCCGTGTa                                                                                                               >  2:5327265/1‑133 (MQ=11)
                                                         agaggccggccCTGCTGGCCAATTTCCACCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaa                                                                                          >  1:2258589/4‑150 (MQ=11)
                                                         aaaggccggccCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCTGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaa                                                                                          <  2:2016702/148‑2 (MQ=11)
                                                          gaggccggccCTGCTGGCCAATTTCCACTCGCCCTTCACCGTTGCAGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaag                                                                                         <  2:4060273/149‑3 (MQ=11)
                                                          aGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGaa                                                                                           >  1:2636446/1‑151 (MQ=19)
                                                          aGGGCCGGCCCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCTGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGGTTACCCGCGaaag                                                                                         >  2:777128/1‑149 (MQ=11)
                                                           gggCCGGTCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGGGGTGGACACACGGCGGGGGCTGGACACAGGCCGCCGTGTGGTCGCGGGTGTACCCGCGagg                                                                                          >  2:2169079/1‑149 (MQ=11)
                                                           gggCCGGCCCTGCTGGCCAAGTTCCCCCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaagg                                                                                        <  2:4920685/151‑4 (MQ=11)
                                                           aggccggccCTGCTGGCCAATTTCCACCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaagg                                                                                        <  2:4645847/150‑4 (MQ=11)
                                                             gccggccCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAacac                                                                                        <  1:3553998/151‑1 (MQ=255)
                                                             gccggccCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAacac                                                                                        >  2:4273895/1‑151 (MQ=25)
                                                             gccggccCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCTGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaagggc                                                                                      <  1:1873277/151‑6 (MQ=11)
                                                              ccggtcCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGaagagg                                                                                       >  1:1913022/1‑147 (MQ=11)
                                                              ccggcgCTGCTGGCCAATTCCCACACGCCGGTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACAcc                                                                                       <  2:5465169/151‑1 (MQ=11)
                                                              ccggccCTGCTGTCCAATTTCCACGCGCCCTTCGCGGTTGCCGCCGCCGCCGTATTCGCGGGTACACCCGCTCCTACACAGATTGGTGATGCACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaagggcc                                                                                     <  2:3902335/151‑7 (MQ=11)
                                                              ccggccCTGCTGGCCAATTTCCACCAGCCATTCACTGTTGCTGCCGCCATCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaagggcc                                                                                     >  1:2792185/1‑145 (MQ=11)
                                                               cggccCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCg                                                                                      >  1:6739495/1‑151 (MQ=255)
                                                               cggccCTGCTGGCCAATTTCCACCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaagggccg                                                                                    <  2:6963923/151‑8 (MQ=11)
                                                               cggccCTGCTGGCCAATTTCCACCCGCCCTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGATGGACACACATCGGTGGTTGGACACAGCCCAC‑‑TGTAGGAGCGGGTTTACCCGCGaaagggccg                                                                                    <  2:2114331/151‑8 (MQ=11)
                                                                ggccCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCgg                                                                                     >  2:6006707/1‑151 (MQ=18)
                                                                  cccTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCa                                                                                   >  2:5872285/1‑151 (MQ=19)
                                                                     tgctgGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCagag                                                                                <  1:3858275/151‑1 (MQ=255)
                                                                       ttgGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGcc                                                                              <  1:1127992/150‑1 (MQ=255)
                                                                       gtgGCCGATTTCCGCCCGCCGTTCACCGTTGCCGCCGCCACGGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGGGAGGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGcc                                                                              <  2:6350343/150‑1 (MQ=11)
                                                                       ctgGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGcc                                                                              <  1:502463/151‑1 (MQ=255)
                                                                       ctgGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGcc                                                                              >  1:2114664/1‑151 (MQ=255)
                                                                        tgGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCg                                                                             <  1:6054160/151‑1 (MQ=255)
                                                                        tgGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCg                                                                             <  2:4569428/151‑1 (MQ=255)
                                                                         ggCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCgg                                                                            >  1:1631246/1‑151 (MQ=255)
                                                                          gCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGt                                                                           <  1:867827/151‑1 (MQ=255)
                                                                           ccAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTg                                                                          >  1:2349895/1‑151 (MQ=255)
                                                                            cAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGc                                                                         >  2:2061095/1‑151 (MQ=255)
                                                                              aTTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCa                                                                       >  1:5886218/1‑151 (MQ=255)
                                                                                ctCCACCCGCCGTTCACGGTTGCCGCCGCGACCGGATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGGTGGACACGCGTCGGTGGTTGGACACAGGCCGGCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATc                                                                     <  2:2649316/150‑1 (MQ=11)
                                                                                    aCCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTCCGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGAGGGTTTACCCGCCAACACCGGCAGAGACGGTGCCAaccacc                                                                 >  2:5096747/1‑151 (MQ=14)
                                                                                            ttCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGCGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGa                                                         >  2:4128663/1‑151 (MQ=255)
                                                                                             tCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGAt                                                        >  2:3009296/1‑151 (MQ=255)
                                                                                               aCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCTCCGCACTGGCttc                                                      >  2:191484/1‑151 (MQ=255)
                                                                                               aCCGTTGCCGCCGACACCGTCTTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGGCACACATCGGTGGTGGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGAttc                                                      <  1:3328835/151‑1 (MQ=17)
                                                                                                ccGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGAttct                                                     <  1:804123/151‑1 (MQ=255)
                                                                                                         ccgccACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCa                                            <  2:1501324/151‑1 (MQ=255)
                                                                                                          cgccACCGTATTCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCAt                                           >  1:2930435/1‑151 (MQ=255)
                                                                                                                    ttCGCGGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCt                                 <  1:1275018/151‑1 (MQ=255)
                                                                                                                     gcgggggTAAACCGGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTa                                <  2:4762717/147‑1 (MQ=255)
                                                                                                                       gcgGGTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCCTGCCCGCTCCTACa                              >  1:1427947/1‑151 (MQ=255)
                                                                                                                          ggTAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAgcg                           >  1:6851228/1‑151 (MQ=255)
                                                                                                                            tAAACCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGcc                         >  1:3244686/1‑151 (MQ=255)
                                                                                                                               aCCCGCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGccccc                      <  1:1148592/151‑1 (MQ=255)
                                                                                                                                   gCTCCTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCa                  >  1:2388997/1‑151 (MQ=255)
                                                                                                                                     gccTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAAt                <  2:2408912/150‑1 (MQ=255)
                                                                                                                                      ccTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAAtt               >  1:2051169/1‑151 (MQ=255)
                                                                                                                                      ccTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAAtt               >  2:7225642/1‑151 (MQ=255)
                                                                                                                                      ccTACGCAGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAAtt               >  1:5487057/1‑151 (MQ=255)
                                                                                                                                          cgcaGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAATTTCaa           >  2:2872510/3‑151 (MQ=255)
                                                                                                                                            caGATTGGTGATGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAATTTCAAgg         <  1:4195146/151‑1 (MQ=255)
                                                                                                                                              gATTGGTGGTGGACACAAGTGGGTGGTTGGACGGAGGGCGCCGTGTGGGAGCGGGGTAACCCGCGAGCACCGGCAGAGCCGGTGCCATCCGCCGCACTGGATTCTTCGCCAGCATGCCCGCACCTACAGCGCCCCCGGCAATTTCAAGGCa       <  2:2695682/151‑1 (MQ=25)
                                                                                                                                               gtgggtgatggACACGCGTCGGTGGTTGGACGGAGGCGGCCGTGTAGGGGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTCCAGCGCCCCCGGCAATTTCAAGGCaa      <  2:5597466/148‑1 (MQ=25)
                                                                                                                                                 tggtgatggACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAATTTCAAGGCAAGc    >  1:2426515/1‑151 (MQ=255)
                                                                                                                                                  ggtgatggACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAATTTCAAGGCAAGCg   >  1:4448271/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
ACTACTGGTAAGACAATTGCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAATTTCAAGGCAAGCGA  >  CP009974/3105269‑3105566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: