| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,756,668 | C→G | intergenic (+550/+90) | RPPX_16775 → / ← RPPX_16780 | hypothetical protein/phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,756,668 | 0 | C | G | 80.7% | 1047.1 / 235.8 | 451 | intergenic (+550/+90) | RPPX_16775/RPPX_16780 | hypothetical protein/phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Reads supporting (aligned to +/- strand): ref base C (38/49); new base G (202/161); total (241/210) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.53e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.00e-01 | |||||||||||
Only 100 of 454 total aligned reads displayed.
AAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACTG > CP009974/3756519‑3756814 | aaaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCt < 2:4843497/151‑1 (MQ=255) aaaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCt < 2:1072385/151‑1 (MQ=255) aaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTg < 1:3172492/151‑1 (MQ=255) aCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTgc > 1:5189977/1‑151 (MQ=255) aCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTgc < 1:1775895/151‑1 (MQ=255) ccGGCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTgcg < 1:6904188/151‑1 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTgcgcc > 1:1970983/1‑150 (MQ=255) ggCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCCGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCAGCTCCCTCCGCCAGGCCTGCGCTCgg > 1:5926519/1‑151 (MQ=14) ggCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCgg < 1:54038/151‑1 (MQ=255) ggCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCCCCCTCCGCAAGGCCTGCGCTCgg > 2:5867620/1‑151 (MQ=255) cccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCCGGCCCCCTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCCCCGCAAGGCCTGCGCTCGGcctc > 1:5690526/1‑151 (MQ=255) cccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGcctc < 2:4143158/151‑1 (MQ=255) cccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGcctc > 1:6531530/1‑151 (MQ=255) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAg > 1:1867704/1‑151 (MQ=255) tcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGt < 2:6982235/151‑1 (MQ=255) cGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTcc > 1:5522477/1‑150 (MQ=255) ggCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGc < 1:751679/151‑1 (MQ=255) ggCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGc > 1:4741952/1‑151 (MQ=255) ccccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCCTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCCAGGCCTGCGCTCGGCCTCCTCAAGTCCCaa > 2:5164111/1‑151 (MQ=14) cccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAAt > 2:1190729/1‑151 (MQ=255) cccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAAt > 1:4129744/1‑151 (MQ=255) cccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAAt < 2:4661769/151‑1 (MQ=255) ccTACGCTGCGCTCCGGGGGGCCCTCGCTCCGGCCCTGCTCCCGGGCGCACGCGCTGCAGGCACCATCCATGCGGCCTCAGCGCTTGACGGGCATCCATGCCCCGCATCTCCCTCCGCAACGCCTGCGCTCGCCCTCCTTAAGTccacaac > 2:6516860/1‑145 (MQ=11) gCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCCTCCATGGGGGCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTGGGCCTCCTGAAGTCGCAATCTGCGt > 1:3883965/1‑151 (MQ=255) cTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTc > 1:4495908/1‑151 (MQ=255) cTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCACTCGGCCTCCTGAAGTCGCAATCTGCGTc < 2:4284780/151‑1 (MQ=255) tGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCg < 2:5225603/151‑1 (MQ=255) tGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCATGCGCTCGGCCTCCTGCAGTCGCAATCTGCGTCg > 2:7151800/1‑151 (MQ=14) cgcTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGcc > 1:2438486/1‑151 (MQ=255) tCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTgg < 1:5810078/151‑2 (MQ=255) tCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTgg < 2:683114/151‑2 (MQ=255) cGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGAc < 1:6164463/151‑1 (MQ=255) cGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCCCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGAc > 1:7008748/1‑151 (MQ=255) gggTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTa > 1:6348028/1‑151 (MQ=255) ggTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTAc > 2:5050402/1‑151 (MQ=255) gTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGGAGGCCCCATCCATGGGCCCTCAGCGCTTGACGGGCATGCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGCAGTCCTAATCTGCGTCCCCTgccgtacc > 1:3535384/1‑144 (MQ=255) gTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCACGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCACCCATGCCCGTCATCTCCCTCCGCAAGGCCTCCGCTCGGCCTCCTGAACTCGCAATCTGCGTCGCCTGAACTccc > 1:4803002/1‑151 (MQ=11) cccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcg > 1:5037917/1‑151 (MQ=255) cccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcg > 1:6098652/1‑151 (MQ=255) ccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATACCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcgc < 1:1014028/151‑1 (MQ=255) tCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAACTCGCAATCTGCGTCGCCTGCACTACCgcgcgc > 2:3913732/1‑151 (MQ=255) cGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCt < 1:549044/151‑1 (MQ=255) cGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCt < 1:2709528/151‑1 (MQ=255) gCTGCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGAGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCtt < 1:1474825/151‑1 (MQ=255) cTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTa > 1:2389993/1‑151 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTCCGTCTCCCTAACTAACCCGCGCTTac > 1:6449313/1‑150 (MQ=14) ccGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGa < 1:6255676/151‑1 (MQ=255) cGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGaa < 2:1588510/151‑1 (MQ=255) cGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa > 2:2421617/1‑151 (MQ=255) gCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGc < 1:107973/151‑1 (MQ=255) gCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGc > 1:6672148/1‑151 (MQ=255) cTTGCTCCCGGGGGCACGCGCTGCAGGCCCCGTCCATGGGGCGTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCaa < 2:6726145/151‑1 (MQ=255) cTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCaa < 2:3628075/151‑1 (MQ=255) ggCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGa < 2:6681347/150‑1 (MQ=255) cTCCCGGGGGCACGCGCTGCAGACCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCAGGCCCGTCAGCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATc < 2:3727116/151‑1 (MQ=11) cTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATc > 1:2586184/1‑151 (MQ=255) cccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa > 2:898759/1‑151 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCGCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaa < 1:3297820/151‑1 (MQ=255) cGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTCCCGCGCGCTTCGAAGCAAGATCaaaa > 2:1992832/1‑151 (MQ=14) gggAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaag < 1:1188120/151‑1 (MQ=255) gggAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaag > 1:4054771/1‑151 (MQ=255) ggAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagc < 2:3321438/151‑1 (MQ=255) aGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcga > 1:3373627/1‑151 (MQ=255) gCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaa > 2:1283400/1‑151 (MQ=255) aCGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaa < 1:67562/151‑1 (MQ=255) cgcgCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGCACTACCGCGCGCTTAGAAGCAAGATCaacagcgaacag > 2:228679/1‑151 (MQ=14) gcgcTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcga > 1:7205076/1‑146 (MQ=255) gcgcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCTCCTCGACTACCGCGCGCTTGGTAGCAAGTTCaaaagcgagaagc > 1:2815531/1‑151 (MQ=14) gcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCCCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcga > 2:2147982/1‑151 (MQ=255) cTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaa < 2:6548706/151‑1 (MQ=255) cTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaa > 2:732924/1‑151 (MQ=255) tGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCCTAGAAGCCAGATCaacagcgcaacgcgaca > 2:4918744/1‑149 (MQ=14) tGCAGACCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcgaaa < 1:222614/151‑1 (MQ=255) cAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattc < 1:1313616/151‑4 (MQ=255) aGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattcg < 2:2679920/151‑5 (MQ=255) ggCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcgaaaagcg < 2:5364391/151‑1 (MQ=255) gCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAgcgc > 1:7107495/1‑151 (MQ=255) cccATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTCAGACGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTc > 2:561611/1‑151 (MQ=17) catCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCtt > 2:4041030/3‑113 (MQ=255) catCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAACGCGAAAAGCGCCCAg > 2:3676960/3‑151 (MQ=17) catCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAg > 1:3057492/3‑151 (MQ=255) atCCATGGGGCCTCAGCGCTTGACGTGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCATCCTGCAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCGTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAgc > 1:512008/2‑151 (MQ=18) atCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAgc < 2:1470068/150‑1 (MQ=255) ccATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAgcgc > 1:4004830/1‑151 (MQ=255) tCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAACAGCGAAAAGCGCTCAGCGCCGCACCTGcc > 2:4956757/1‑150 (MQ=255) aGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTg > 1:816488/1‑151 (MQ=255) gcgcTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGa < 1:4343550/151‑1 (MQ=255) cgcTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAg > 2:3107167/1‑151 (MQ=255) gcTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAgg > 1:3646649/1‑151 (MQ=255) gttGACGGGCATCCATGCCCGTCATCTCCCGCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAggg < 2:4491010/150‑1 (MQ=255) cTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAggg < 1:4200425/151‑1 (MQ=255) gCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCa > 1:460674/1‑151 (MQ=255) cATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCaa > 2:1891441/1‑151 (MQ=255) tCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTTCGTCGCCTGTACTACCGCTCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCTCCGCACCTTCTTGAGGGTTTCGGCAATc > 2:2796118/1‑151 (MQ=25) ccATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCa > 2:3500771/1‑151 (MQ=255) aTGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAgg < 2:1781195/151‑1 (MQ=255) ccGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATg > 1:1645853/1‑151 (MQ=255) gTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGcc > 2:6343490/1‑151 (MQ=255) cctccGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAg < 1:6814211/147‑1 (MQ=255) tccGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCg > 2:6177424/3‑151 (MQ=255) | AAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACTG > CP009974/3756519‑3756814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |