BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	5,597,130	T→C	R617R (CGT→CGC)	RPPX_24915 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	5,597,130	0	T	C	100.0%	1475.0 / NA	521	R617R (CGT→CGC)	RPPX_24915	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (245/276); total (245/276)

Only 100 of 536 total aligned reads displayed.

CTTTAGCCAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACCACTGCGCGTGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGAATACACCCTGGGGTTCGCT  >  CP009974/5597013‑5597277

cTTTAGCCAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCGCGGTGTCTATCGAGCTGACCACTCCTGCGCGCGTGAAACCCAACGTCCCTGGGGTGCTCCCCTcc                                                                                                                    >  2:6700765/1‑151 (MQ=11)

cTTGAGCCAGGAGGTGCAGCGGTATTTGAAGCGCGGCCTGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTcc                                                                                                                    <  2:4268812/151‑1 (MQ=11)

 tttAGCCAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCcg                                                                                                                   >  1:6786363/1‑151 (MQ=14)

   tAGCCAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTGcggc                                                                                                                 <  2:5979844/151‑1 (MQ=9)

   tAGCCAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCcggc                                                                                                                 >  1:5253907/1‑151 (MQ=9)

    aGCCAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCcggcg                                                                                                                <  2:4138272/151‑1 (MQ=14)

       cAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtg                                                                                                             >  2:3999993/1‑151 (MQ=12)

       cAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtg                                                                                                             >  1:1943127/1‑151 (MQ=12)

        aggaggTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtgg                                                                                                            >  2:3129358/1‑151 (MQ=12)

        aggaggTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtgg                                                                                                            >  2:6226134/1‑151 (MQ=9)

         ggaggTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtggt                                                                                                           <  2:3868161/151‑1 (MQ=12)

         ggaggTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtggt                                                                                                           <  1:3005134/151‑1 (MQ=12)

            ggTGGAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTGCTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCGCCGGCggtggtggt                                                                                                        <  2:1821947/151‑1 (MQ=255)

            ggTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtggtggt                                                                                                        >  1:6327479/1‑151 (MQ=12)

            ggTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtggtggt                                                                                                        >  1:2402757/1‑151 (MQ=12)

            ggTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtggtggt                                                                                                        >  1:142589/1‑151 (MQ=12)

               gCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtggtggtggt                                                                                                     <  1:2133649/151‑1 (MQ=17)

               gCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCggtggtggtggt                                                                                                     >  2:4050701/1‑151 (MQ=17)

                 aGCGGGATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGttt                                                                                                   <  2:5288017/151‑1 (MQ=12)

                  gCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTa                                                                                                  <  1:4376982/151‑1 (MQ=17)

                     gTATTTGAAGAGCGGCATGGCGCAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAAc                                                                                               <  2:1961830/151‑1 (MQ=9)

                      tATTTGAAGAGCAGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACg                                                                                              <  1:4882500/151‑1 (MQ=12)

                       aTTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGc                                                                                             <  1:3518617/151‑1 (MQ=12)

                       aTTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGc                                                                                             >  2:5182169/1‑151 (MQ=9)

                        tttGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCa                                                                                            >  2:108682/1‑151 (MQ=12)

                         ttGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAg                                                                                           >  1:7038677/1‑151 (MQ=16)

                         ttGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAg                                                                                           >  1:3150186/1‑151 (MQ=16)

                            aaGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGa                                                                                        <  1:4226701/151‑1 (MQ=21)

                              gagCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGAtg                                                                                      <  1:5276731/151‑1 (MQ=255)

                               ggCGGCATGGCACGGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGAtgc                                                                                     <  2:1570789/150‑2 (MQ=255)

                               agCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGAtgc                                                                                     <  1:1329928/151‑2 (MQ=255)

                               agCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGAtgc                                                                                     >  2:7051439/1‑150 (MQ=16)

                                 cGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGAtgctg                                                                                   >  1:1026213/1‑148 (MQ=12)

                                   gCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTtgtg                                                                                 <  1:32287/151‑1 (MQ=255)

                                   gCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCtgtg                                                                                 <  2:3036571/151‑1 (MQ=16)

                                      tGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGtt                                                                              <  1:6042539/151‑1 (MQ=255)

                                      tGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGtt                                                                              <  2:6382926/151‑1 (MQ=12)

                                       ggCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTc                                                                             >  1:3931105/1‑151 (MQ=255)

                                         cacaGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCaa                                                                           <  1:3824461/151‑1 (MQ=255)

                                          acaGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAAc                                                                          >  2:3308825/1‑151 (MQ=255)

                                              gTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCt                                                                      >  1:1729264/1‑151 (MQ=255)

                                               ttGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCtt                                                                     <  1:6934894/151‑1 (MQ=255)

                                                   agagATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCg                                                                 <  2:2466913/151‑1 (MQ=255)

                                                   agagATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCg                                                                 >  1:4699024/1‑151 (MQ=255)

                                                   agagATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCg                                                                 >  1:155060/1‑151 (MQ=255)

                                                    gagaTGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGCCTAAACCAAGCGATGTTGTGGTTCAACATCTTATCGc                                                                >  2:3777704/1‑151 (MQ=14)

                                                      gaTGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGCGGTGGTTTAAACGCAGGGATGCCGTGGTTCACCATCTTATCGCTc                                                              >  2:6670071/1‑151 (MQ=11)

                                                        tGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCaa                                                            <  2:2599842/151‑1 (MQ=255)

                                                          aaaGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGa                                                          <  1:1780907/151‑1 (MQ=255)

                                                          aaaGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGa                                                          >  1:3261502/1‑151 (MQ=255)

                                                           aaGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGAc                                                         >  2:6774338/1‑151 (MQ=255)

                                                           aaGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGAc                                                         <  1:4808147/151‑1 (MQ=255)

                                                           aaGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCaacac                                                         >  2:4646116/1‑148 (MQ=255)

                                                           aaGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAacac                                                         <  1:6855728/151‑1 (MQ=255)

                                                              cGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGc                                                      <  1:2040551/151‑1 (MQ=255)

                                                               gTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGcc                                                     >  1:5950709/1‑151 (MQ=255)

                                                               gTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGcc                                                     >  1:5162765/1‑151 (MQ=255)

                                                                 tGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTa                                                   <  2:7185601/151‑1 (MQ=11)

                                                                  gcgcATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTac                                                  >  2:6155141/1‑151 (MQ=255)

                                                                    gcATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCGacaa                                                >  2:4874734/1‑151 (MQ=255)

                                                                    gcATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTacaa                                                >  1:6620540/1‑151 (MQ=11)

                                                                     cATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTacaac                                               >  2:5118615/1‑151 (MQ=255)

                                                                       tctcGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAg                                             <  1:5556684/151‑1 (MQ=255)

                                                                         tcGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGcc                                           <  2:3388599/151‑1 (MQ=14)

                                                                         tcGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGcc                                           >  1:545154/1‑151 (MQ=255)

                                                                          cGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCt                                          >  2:3688074/1‑151 (MQ=255)

                                                                          cGGGTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCt                                          <  1:1453427/151‑1 (MQ=255)

                                                                           gggTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTg                                         >  1:1193536/1‑151 (MQ=255)

                                                                           gggTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTg                                         >  2:2730996/1‑151 (MQ=255)

                                                                            ggTAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGc                                        >  2:4407100/1‑151 (MQ=11)

                                                                              tAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCag                                      >  1:262652/1‑151 (MQ=255)

                                                                              tAGCCGCACGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCag                                      >  1:4173100/1‑151 (MQ=14)

                                                                                     aCGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTg                               >  2:2043479/1‑151 (MQ=255)

                                                                                      cGGTGTCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGa                              >  2:5886468/1‑151 (MQ=255)

                                                                                        gtgtCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATg                            <  2:237763/151‑1 (MQ=255)

                                                                                         tgtCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGc                           >  2:2975615/1‑151 (MQ=255)

                                                                                         tgtCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAagagcgacgc                           >  1:4533397/1‑145 (MQ=11)

                                                                                          gtCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAagagcgacgca                          >  1:6190799/1‑144 (MQ=11)

                                                                                          gtCTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCa                          <  2:5429388/151‑1 (MQ=11)

                                                                                            cTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAACCGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCAcc                        <  1:5827727/151‑1 (MQ=11)

                                                                                            cTATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCAcc                        <  1:2858474/151‑1 (MQ=255)

                                                                                             tATCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCt                                                                      >  1:2207000/1‑104 (MQ=11)

                                                                                               tCGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGa                     <  1:342282/151‑1 (MQ=11)

                                                                                                cGAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGaa                    >  1:7135924/1‑151 (MQ=255)

                                                                                                 gAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGAAt                   <  1:959967/151‑1 (MQ=255)

                                                                                                 gAGCTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAAt                   <  2:7236886/151‑1 (MQ=11)

                                                                                                    cTGACCACTACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATaca                <  2:4772968/151‑1 (MQ=11)

                                                                                                       accactACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGAATACAccc             <  2:608970/151‑1 (MQ=255)

                                                                                                       accactACTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCagaag                                   >  2:6546837/1‑129 (MQ=14)

                                                                                                        ccactaCTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGAATACACCCt            >  2:2824509/1‑151 (MQ=255)

                                                                                                        ccactaCTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGAATACACCCt            <  1:763971/151‑1 (MQ=255)

                                                                                                        ccactaCTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCt            <  1:3722923/151‑1 (MQ=11)

                                                                                                           ctacggcgcgcGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCTggg         <  2:682995/146‑1 (MQ=11)

                                                                                                           ctacTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGAATACACCCTggg         >  1:6540552/3‑151 (MQ=255)

                                                                                                              cTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCTGGGGtt      >  2:1649557/1‑151 (MQ=11)

                                                                                                              cTGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCTGGGGtt      <  2:150921/151‑1 (MQ=11)

                                                                                                               tGCGCGCGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCTGGGGTTc     <  1:5487472/151‑1 (MQ=11)

                                                                                                                 cgcgcgTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCTGGGGTTCGc   <  2:5765922/151‑1 (MQ=11)

                                                                                                                 cgcgcgTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCTGGGGTTCGc   <  2:1263143/151‑1 (MQ=11)

                                                                                                                  gcgcGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGCTGTGGTTCAACATCTTATCGCTCAACACGGCCTACAACAGCCTGCAGAAGAGCGACGCACCGGAATACACCCTGGGGTTCGct  >  2:3535930/1‑151 (MQ=11)

CTTTAGCCAGGAGGTGCAGCGGTATTTGAAGAGCGGCATGGCACAGGTTGAAGAGATGAAAGCGTTGCGCATCTCGGGTAGCCGCACGGTGTCTATCGAGCTGACCACCACTGCGCGTGTGAAACCCAACTTCCTTGGGTTGCTCACCTCCGGCGGTGGTGGTGGTTTAAACGCAGGGATGTTGTGGTTCAACATCTTATCGCTCAAGACGGCCTACAACAGCCTGCAGAAGAGTGATGCACCGGAATACACCCTGGGGTTCGCT  >  CP009974/5597013‑5597277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`