| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 25,890 | G→A | intergenic (+315/‑256) | RPPX_00140 → / → RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 25,890 | 0 | G | A | 94.6% | 882.6 / 6.5 | 286 | intergenic (+315/‑256) | RPPX_00140/RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (2/13); new base A (140/125); total (143/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.96e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 303 total aligned reads displayed.
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 | ccAATCTCCACCCGCCGTTCACCGTTGCCGGCACAACCGTAGTCGCGCGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTg < 2:2456298/151‑1 (MQ=2) aTCTCCACCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccg < 1:2776120/151‑1 (MQ=2) ctcCCCCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccgcc < 2:3581393/151‑1 (MQ=2) ccccGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCa < 1:6599335/150‑1 (MQ=2) gccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccg > 1:5323644/1‑151 (MQ=255) gccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccc > 2:3039193/1‑150 (MQ=255) ccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgc > 1:6922092/1‑151 (MQ=255) cgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgcc > 1:2434710/1‑151 (MQ=255) gTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTCGGAGCGGGGTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCCCCCCCCCCCCATCACCGCTaccgccg > 2:5518615/1‑151 (MQ=17) tCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgccgcc < 1:4136955/151‑1 (MQ=255) aCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGACCACCGTTACCCCCGCCAc > 2:2255817/1‑151 (MQ=255) cGTTGCCGCCGCCGCCGTATGCCTGGGTCAACCCGCCCCTACACACGCATCGGGGGTGCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCg < 1:5547152/151‑1 (MQ=17) gTTGCCGCCCCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGt < 1:264479/151‑1 (MQ=255) agaggccgccCCCATAGTCGCGGGGCAACCCGATCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTAt < 1:3510525/147‑1 (MQ=17) gccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTAtt > 1:3784907/1‑151 (MQ=255) gggccgacCCCATAGTCGCGGGGCACCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGACGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTc < 2:6992252/149‑1 (MQ=17) ccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGCCACAGGCCGTGGTAGGGGCGGGTTCACTCGCGAACGGGCCGGCCCCGCTGGCCGCGCTCCACCCGCCGATCACCGCTACCGCCTCCACCGTCTTc > 2:2021502/1‑151 (MQ=17) ggccgccACCGTAGTGGGCGGTCACCCTGATCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTcg < 2:4080820/150‑1 (MQ=17) cgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTcg > 1:6051576/1‑151 (MQ=255) gccACCGTATTCGCGGGTAACCCCGCTCCTACACACGCATCGGGGGTGCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCggg < 1:1298206/151‑1 (MQ=255) gccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCggg > 1:1930898/1‑151 (MQ=255) cACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTa > 1:4041239/1‑151 (MQ=255) tATTCGCGGGTAACCCCCCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAAccn < 1:1057048/151‑2 (MQ=255) tATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAAccc > 2:1263559/1‑151 (MQ=255) gggggggTAGCCCGGCTCCGACACGCGCAGCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCt < 2:6074418/147‑1 (MQ=14) cgGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGGAAACCCGCTCCt > 1:4816339/1‑151 (MQ=255) gggTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTa > 2:6615940/1‑151 (MQ=255) ggTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTac > 1:571662/1‑151 (MQ=255) gTAAACCCGCTCCTACAGACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca < 1:3080053/151‑1 (MQ=255) aaaCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaccca > 2:728222/1‑151 (MQ=255) aaaCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGCAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTCTTCGCGGGTAAACCCGCTCCTacaca > 1:3178396/1‑151 (MQ=255) ggccGCTCCTAGACACGCATCGGGGGTTGGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACg < 2:5653131/149‑1 (MQ=255) gCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAAGCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc > 1:1599476/1‑151 (MQ=255) ccTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCggg > 2:5137549/1‑151 (MQ=255) cacacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTc > 2:2586303/1‑151 (MQ=255) agcacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTc < 2:5613786/149‑1 (MQ=255) acacGCATCGGTGGTTGGACACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCg < 1:5894476/151‑1 (MQ=255) acacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGTCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCCCCGCCGTATTCGCGGGTCAACCTGCTCCAACCCACGCATCGGGGCTct > 2:5576002/1‑150 (MQ=14) cacGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCCCCTACACACGCATCGGGGTTCgg > 1:4315365/1‑151 (MQ=255) acGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTAGGc > 2:361467/1‑151 (MQ=255) cGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGca < 2:3180410/151‑1 (MQ=255) gCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGGATTCGCGGGTAGACCCGCTCCTACACACGCATCGGGGTCCGGcac > 2:915776/1‑151 (MQ=255) cATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGcacc > 2:470828/1‑150 (MQ=255) aTCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGcacac > 2:3112253/1‑150 (MQ=255) tggggCACGGGCCGTCGTAGGAGCGGGTTCACCCGCGAAGGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATgc < 2:4836394/148‑1 (MQ=255) gCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgccg > 1:6728800/1‑151 (MQ=255) cacaGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGTCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTCCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgccgc < 1:6433502/151‑1 (MQ=255) caGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCcgcgc > 1:5809938/1‑151 (MQ=255) aGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTTGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCTCAGCGCGATGCGCtgcgcg > 1:483871/1‑151 (MQ=255) ggCCGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCGCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgg < 2:7057821/151‑1 (MQ=255) ccGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTAGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggc > 1:2596068/1‑151 (MQ=255) ccGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggc < 2:75315/151‑1 (MQ=255) ccGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggc > 1:891029/1‑151 (MQ=255) tcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGggcggc < 1:3860619/151‑1 (MQ=255) tcgtAGGAGCGGGTCCACCCGCGAAAGGGCCGGTCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGggcggc < 2:4804755/151‑1 (MQ=255) aGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTc > 1:5679938/1‑151 (MQ=255) ggAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCg > 2:6332651/1‑151 (MQ=255) ggAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCCCCATGCGCCGCGCGGGCGGCGCTCg > 2:6697719/1‑151 (MQ=255) aGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGAt < 1:4669542/151‑1 (MQ=255) gggggTTCACCCGCGACAGGGCCGGCCCTGCTGGCCAATCTCCACGCGCCGTTCACCGTTTCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGAtt < 2:1669965/149‑1 (MQ=255) gCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGAtt < 1:6221750/151‑1 (MQ=255) gCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGAtt < 2:868695/151‑1 (MQ=255) cGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGAttt > 2:1554415/1‑151 (MQ=255) gggTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTtc > 1:823122/1‑151 (MQ=255) ggTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTtcc > 2:1763487/1‑150 (MQ=255) ggTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCCCGATTtct > 2:3901843/1‑151 (MQ=255) gTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTtctc < 1:1707110/151‑1 (MQ=255) tCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCGCAg > 2:2824933/1‑151 (MQ=255) cACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGa < 2:402236/151‑1 (MQ=255) ccccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGAc < 1:17954/150‑1 (MQ=255) aCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGAc > 2:2930848/1‑151 (MQ=255) cccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACg < 2:4242672/151‑1 (MQ=255) cgcgAATGGGCCGGTCCTGCTAGCCAATCTCCTCCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACCGCGCGATGCGCCGCGCGGGCGGCGCTCGATATCTCAGGCGcc > 1:2446606/1‑151 (MQ=17) cgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCATACGCCGa > 2:4442280/1‑151 (MQ=255) gAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGAc > 1:1197689/1‑151 (MQ=255) aGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAAt > 1:6320799/1‑151 (MQ=255) gggCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTACCGCCGCCACCGTATTCGCGGGTAACCCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATc < 2:1334659/151‑1 (MQ=255) cggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTtcc > 1:1118273/1‑151 (MQ=255) ggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTtcct > 1:2940839/1‑151 (MQ=255) ggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTtcct < 2:2284680/151‑1 (MQ=255) ccTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTccc < 1:4500633/151‑1 (MQ=255) ccTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTccc > 2:1905070/1‑151 (MQ=255) tgGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGccc > 1:3937419/1‑151 (MQ=255) gCCACTCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGccccc < 2:6739347/151‑1 (MQ=255) ccAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTTCCTGcccccc > 1:3037721/1‑151 (MQ=255) aaTCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccac < 1:360636/151‑1 (MQ=255) cccccccGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACcaca < 1:4701740/147‑1 (MQ=255) cccACCCGCCGATCACCGTTACCGCCGCCCCCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACcaca < 2:3405983/150‑1 (MQ=255) ccccccGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAg < 2:5284180/148‑1 (MQ=255) cACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGc > 1:2136180/1‑151 (MQ=255) ccccGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGct < 1:7131352/150‑1 (MQ=255) cgccgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGctctc > 1:5383822/1‑151 (MQ=255) cgATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGc < 2:4825471/151‑1 (MQ=255) gaggaCCGTTGCGGAGGGCACCGTATTCGCGGGTAAAGCCGCTCCTACACTCGCATCGGGGTTCTGCACAGCGCGATGCGCCGCGCGGGCTGCGCGCGATTTCTCAGACGCCGACAAGCTGCCTCCCTGCCCCGCACCACAGCCCTCTgga < 2:1468739/147‑3 (MQ=255) gATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCa > 2:4998923/1‑151 (MQ=255) aTCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCaa > 1:2524096/1‑151 (MQ=255) aCCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAAtt < 1:6292794/151‑1 (MQ=255) cGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCa < 1:1983471/151‑1 (MQ=255) gTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAt > 1:2348582/1‑151 (MQ=255) gTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAt < 2:4119150/151‑1 (MQ=255) | CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |