| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,158,399 | G→C | intergenic (+1922/‑13361) | RPPX_05120 → / → RPPX_05130 | hypothetical protein/channel protein TolC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,158,399 | 0 | G | C | 90.0% | 1800.1 / 159.7 | 712 | intergenic (+1922/‑13361) | RPPX_05120/RPPX_05130 | hypothetical protein/channel protein TolC |
| Reads supporting (aligned to +/- strand): ref base G (31/40); new base C (329/311); total (361/351) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 727 total aligned reads displayed.
CGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGACCC > CP009974/1158262‑1158546 | ggCAGCTTCACCGTCACCCTCGCGCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGGCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCGGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCa < 2:3596018/151‑1 (MQ=11) ggCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCCAACCGGTGATCa > 1:3177168/1‑151 (MQ=11) ggCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCa > 1:1484606/1‑151 (MQ=14) gCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGGCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGCTCACCGCCCCCGACATCACCGCCCCCGCCGCACCGAGCGAACTGGGGATCaa > 1:4782009/1‑151 (MQ=11) cAGCTTCACCGCCACCCTCTACCCGCCTCCGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGCCGGCGCCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAAt < 2:1835240/151‑1 (MQ=11) gCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGc < 1:3015207/151‑1 (MQ=12) gCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGc < 1:5917449/151‑1 (MQ=9) gCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGc < 1:7073131/151‑1 (MQ=12) cTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGcc < 2:6979662/151‑1 (MQ=12) cACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGCTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGAGATCAATGCCGAc > 2:2264349/1‑151 (MQ=11) cACCGTCACCCGCGACCCGGGGCAGGCCGACGGGGAACTGCGGGACGGGGTCGCCATCGAGGAGGGGGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGGCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGAc < 2:4691985/151‑1 (MQ=11) aCCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGACCGAGCTGGTGATCAATGCCGACg > 2:7214108/1‑151 (MQ=255) ccGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTAGAGGCGACCGCCATCGATGACGACGGCGAGTCCTCCCTGCCCGCACAGATCACCGCGCCCGACGTCAGCGCCACCACCGCACCGACCGAGCTGGTGATCAATGCCGACgg > 2:800053/1‑151 (MQ=11) cGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGc < 1:5771066/151‑1 (MQ=12) gTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCa > 2:140462/1‑151 (MQ=9) tCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAAt < 1:1991956/140‑1 (MQ=12) tCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAg > 1:142765/1‑151 (MQ=14) tCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTGCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCCACCGAGCTGGCGCGCAATGCCCCCGGCac > 2:1151255/1‑150 (MQ=11) cagccTCGACCCGCCTCAGGCCACCGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGc < 2:3446846/148‑1 (MQ=255) cACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGCTTCCTCGCTGCCCGCCCAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGCCCGCCCTGGTGATCAATGCCGCCGGCCGc > 2:656191/1‑151 (MQ=11) ccccGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCAc < 1:3868113/150‑1 (MQ=9) aCCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCAc < 1:5429723/151‑1 (MQ=12) cccggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTcccc > 1:6889891/8‑151 (MQ=255) cccggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCAcc < 1:3245445/144‑1 (MQ=12) cccggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCAcc > 1:4331900/8‑151 (MQ=9) ccGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGCGATCAATGCCGACGGCAGCCCGGTccccc > 2:4813539/1‑150 (MQ=11) gCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGc > 2:1908827/1‑151 (MQ=12) gCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGc > 1:6352315/1‑151 (MQ=255) gcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc < 2:632428/148‑1 (MQ=17) gcacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc < 1:3385936/145‑1 (MQ=11) cccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg < 2:909591/149‑1 (MQ=17) cTCAGGCCAGCGGCGAACTGCTGGACGTGGTCGGCATCGATGACGGCGGCGTTTCCTCGCTCCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg < 2:2676478/151‑1 (MQ=11) cTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg > 1:3838459/1‑151 (MQ=255) tCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCgc > 1:2216925/1‑150 (MQ=255) aGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc > 2:2341499/1‑151 (MQ=18) aGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc > 1:1365014/1‑151 (MQ=16) ggCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc < 2:1680049/151‑1 (MQ=19) agCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc < 1:832133/150‑1 (MQ=255) ggCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCgg < 1:4097007/151‑1 (MQ=255) ggCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCgg < 2:44703/151‑1 (MQ=255) gAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgca > 1:2708668/1‑151 (MQ=21) gctgctGGACGTGGTCGCCATGGATGAGGGCGGCGGTTCCTCGCTGCCCGCACAGATCACCGCGCCCGAGATCGCCGCCCCTGCCGCACCGCCCGGGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgcagc < 2:4321212/151‑1 (MQ=11) gctgctGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgcagc < 1:1077/151‑1 (MQ=255) gctgcgGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgcagc < 2:5299160/151‑1 (MQ=255) gctgGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCAcc > 2:637267/1‑151 (MQ=18) tgGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGt > 1:5353426/1‑151 (MQ=25) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACgg < 2:6705182/107‑1 (MQ=255) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACgg > 1:6705181/1‑107 (MQ=255) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGTCAGCACCGTCcgcg > 2:526259/1‑151 (MQ=255) gTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAAc < 1:3604358/130‑1 (MQ=255) tCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCt > 2:202474/1‑151 (MQ=255) cGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTg > 1:1000938/1‑151 (MQ=255) gCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTgg > 1:5293919/1‑151 (MQ=21) cATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGgcc > 1:5076392/1‑151 (MQ=255) gATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGccgccg > 2:4591441/1‑151 (MQ=255) gACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACg < 2:3840294/151‑1 (MQ=255) cggcggCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGCGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGCCCGCCGCCGGc > 2:1521101/1‑151 (MQ=255) cggcggCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGc < 1:4573587/151‑1 (MQ=255) ccTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGCCGGCACCACTGTGCt > 2:3247444/1‑151 (MQ=255) ccTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCt < 1:4435164/151‑1 (MQ=255) tCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTgg > 1:2643137/1‑151 (MQ=255) cGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTggg < 1:7005400/151‑1 (MQ=255) cGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTggg > 1:651588/1‑151 (MQ=255) cTGCCCGCACGGTTCACCGGGCCGGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCGGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTa < 1:3985431/151‑1 (MQ=11) cTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTa > 1:7237627/1‑151 (MQ=255) tGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAg > 2:3357100/1‑151 (MQ=16) cGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg < 1:520557/151‑1 (MQ=21) cGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg < 1:4679744/151‑1 (MQ=19) cGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg > 2:511451/1‑151 (MQ=255) cGCACAGAGCACCGCGCCCGACCTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg < 2:4191709/151‑1 (MQ=255) cacaGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTggg > 2:4068450/1‑150 (MQ=255) cacaGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGt < 1:1536950/151‑1 (MQ=255) gATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGtt < 2:6217416/151‑1 (MQ=25) gATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGtt < 2:2453174/151‑1 (MQ=19) ccACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTgg < 2:5514757/150‑1 (MQ=16) cACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGgc < 1:1799090/151‑1 (MQ=255) cccGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGgcg < 2:3152813/150‑1 (MQ=16) ccGCGCCCGACGTCGCCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGgcgc < 1:6291544/151‑1 (MQ=255) cgcgCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTCGCGTGGTAGTTGGAGCt > 2:5803941/1‑151 (MQ=255) cgcgCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCt < 1:4933274/151‑1 (MQ=19) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc < 2:6488929/151‑1 (MQ=25) ccGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCgg > 2:6110758/1‑151 (MQ=18) ccGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGGGGTCACAGGCCGTGCCGAACCGGGCACCACCCTACGCGAGCTGCCCGCCGACGGCACCACTGTCCTGAGTCGCGCGGTAGCTCGCGCCAcccg > 2:3008204/1‑149 (MQ=11) cGACATCACCGCCCGTGCCGCGCCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGc < 2:6824823/151‑1 (MQ=255) gACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGGACCGGGCTGCACCGTACGCGTGCTTGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCtcactgcc > 2:1297036/1‑144 (MQ=11) cccGCCCCGGCCGGACCGACCGAGCTGGTGATCAATGCCGCCGGCAGCGTGGGCACCGGCCGTGCCGAACCGGGCAGCGCCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCa < 2:3729675/150‑1 (MQ=11) ccGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCCGCTTCAg > 1:2432136/1‑151 (MQ=255) ccGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAg < 2:1013525/151‑1 (MQ=18) cGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGc < 1:5598332/151‑1 (MQ=21) cccTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTa > 1:6764084/1‑134 (MQ=255) ccTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCa < 1:2334367/151‑1 (MQ=16) cTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCAc < 1:2912593/151‑1 (MQ=21) ccGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCt > 1:603023/1‑151 (MQ=25) cGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCta > 1:3712656/1‑150 (MQ=255) cGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCta < 1:3062291/151‑2 (MQ=18) cACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTAGa < 1:1724790/151‑1 (MQ=255) cccgaccgaGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAc < 1:1904565/150‑1 (MQ=19) accgaccgAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAc > 2:5608888/1‑151 (MQ=19) ccgaccgaGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTAGAcc < 2:2821006/151‑1 (MQ=255) cGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAccc < 2:5940044/151‑1 (MQ=21) | CGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGACCC > CP009974/1158262‑1158546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |