| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,158,403 | A→G | intergenic (+1926/‑13357) | RPPX_05120 → / → RPPX_05130 | hypothetical protein/channel protein TolC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,158,403 | 0 | A | G | 90.1% | 1728.6 / 155.4 | 741 | intergenic (+1926/‑13357) | RPPX_05120/RPPX_05130 | hypothetical protein/channel protein TolC |
| Reads supporting (aligned to +/- strand): ref base A (33/40); new base G (334/330); total (371/370) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 741 total aligned reads displayed.
CGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGACCCGCCA > CP009974/1158262‑1158550 | ggCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCCAACCGGTGATCa > 1:3177168/1‑151 (MQ=11) ggCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCa > 1:4948334/1‑151 (MQ=9) gCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGGCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGCTCACCGCCCCCGACATCACCGCCCCCGCCGCACCGAGCGAACTGGGGATCaa > 1:4782009/1‑151 (MQ=11) cAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAAt < 2:3010467/151‑1 (MQ=9) cAGCTTCACCGCCACCCTCTACCCGCCTCCGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGCCGGCGCCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAAt < 2:1835240/151‑1 (MQ=11) aGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATg < 2:4705429/151‑1 (MQ=9) cTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGAGCGAACTGGTGATCAATGcc > 2:526400/1‑151 (MQ=255) cTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGcc < 2:1158707/151‑1 (MQ=255) ttCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCg > 1:595354/1‑151 (MQ=255) ccACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGa < 2:3474399/150‑1 (MQ=12) cACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGAc > 1:744967/1‑151 (MQ=9) cACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGCCGCCATCGATGACGGCGGCGCTTCCTCGCTGCCCGCACAGATCACCGCGCCCGCCATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGAc > 2:2264552/1‑151 (MQ=11) aCCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTCCCCGCACAGATCACCCCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACg > 2:2895447/1‑151 (MQ=255) aCCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGACCGAGCTGGTGATCAATGCCGACg > 2:7214108/1‑151 (MQ=255) aCCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACg > 1:2999996/1‑151 (MQ=255) gTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCa > 1:3061970/1‑151 (MQ=9) gTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCa < 1:6306004/151‑1 (MQ=9) tCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAg < 2:4072080/151‑1 (MQ=12) tCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAg > 1:142765/1‑151 (MQ=14) tCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAg < 1:3239199/151‑1 (MQ=12) cACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGc < 1:6091079/151‑1 (MQ=17) cACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGCTTCCTCGCTGCCCGCCCAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGCCCGCCCTGGTGATCAATGCCGCCGGCCGc > 2:656191/1‑151 (MQ=11) ccTCGACCCTCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTg > 1:4334558/1‑151 (MQ=9) ccTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCCACCGAGCTGGTGAGCCATGCCGACGGCAGCgcg > 2:5351024/1‑149 (MQ=11) gACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCa > 2:4475176/1‑151 (MQ=17) ccccGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCAc < 1:3868113/150‑1 (MQ=9) ccGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCg < 2:3377286/151‑1 (MQ=17) ccGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCg > 1:5379652/1‑151 (MQ=255) cgcacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGc < 1:577928/144‑1 (MQ=11) gcacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc < 1:3385936/145‑1 (MQ=11) ccTCAGGCCCACGGCGAACTGCTGGACGCGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc < 1:4444094/151‑1 (MQ=11) cccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg < 2:909591/149‑1 (MQ=17) cTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg > 1:3838459/1‑151 (MQ=255) aGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc > 1:1365014/1‑151 (MQ=16) ggCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc < 2:1680049/151‑1 (MQ=19) ggCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCgg < 1:4097007/151‑1 (MQ=255) gaactgctgGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGCACCGGgca > 2:4914947/4‑151 (MQ=255) gctgctGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGgcagc < 1:1077/151‑1 (MQ=255) actgctgGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGCTCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGACCGACCTGGGGATCGATGCCGACGGCACCGTGGCCACCCGCCGTGCCGCACCGGacagc > 2:2346501/2‑151 (MQ=11) gctgGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCAcc < 2:1017845/151‑1 (MQ=255) gctgGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCAcc > 2:637267/1‑151 (MQ=18) tgGACTTGGTCGCCATCGATGACGGCGGCGTTTCCACGCTGCCCGCACAGATCACCGCGCCCGGCATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTAACCGGCCGTGCCGAACCGGGCAGCACCGt < 1:1675898/151‑1 (MQ=11) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACgg < 2:6705182/107‑1 (MQ=255) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACgg > 1:6705182/1‑107 (MQ=255) gTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTAcgcg < 1:508159/151‑1 (MQ=255) gTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAAc > 2:3604358/1‑130 (MQ=255) gTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAAc < 1:3604358/130‑1 (MQ=255) tCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCt > 2:202474/1‑151 (MQ=255) cGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTg > 1:1000938/1‑151 (MQ=255) cATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGgcc > 2:6318489/1‑151 (MQ=16) cATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGgcc > 1:2421540/1‑151 (MQ=255) gATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGccgccg > 2:4591441/1‑151 (MQ=255) aTGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGa < 1:860386/151‑1 (MQ=255) gACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACg < 1:1903972/151‑1 (MQ=255) aCGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGCCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACgg > 2:3732709/1‑151 (MQ=16) cggcggCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGCGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGCCCGCCGCCGGc > 2:1521101/1‑151 (MQ=255) ggcggcGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGca < 1:4577978/151‑1 (MQ=255) cgTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCCGCACCGTACGCGTGCTGGCCGCCGACGGcaccccc > 2:4344877/1‑148 (MQ=255) ttCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACtgtg > 1:2617903/1‑151 (MQ=255) ccTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGCCGGCACCACTGTGCt > 2:3247444/1‑151 (MQ=255) cTCGCTGCCCGCACAGAGCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTg < 2:1323687/151‑1 (MQ=255) tCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGTCAGCACCGTACGCGTCCTGGCCGCCGACGGCTCCCCTGTGCTgg > 2:2682663/1‑151 (MQ=11) cTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTa > 1:2865816/1‑151 (MQ=255) gCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGc > 2:801272/1‑151 (MQ=21) cGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg < 1:520557/151‑1 (MQ=21) cGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg < 1:4679744/151‑1 (MQ=19) cGCACAGAGCACCGCGCCCGACCTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTg < 2:4191709/151‑1 (MQ=255) aGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGt > 1:711259/1‑151 (MQ=25) gATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGtt < 2:2453174/151‑1 (MQ=19) gATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGtt < 2:6217416/151‑1 (MQ=25) aTCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGca > 1:1482458/1‑124 (MQ=255) ccACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTgg < 2:5514757/150‑1 (MQ=16) cACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGgc > 1:3725078/1‑151 (MQ=255) cccGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGgcg < 2:3152813/150‑1 (MQ=16) aCCGCGCCCGACATCACCGCCCCTGCCGCACCGGCCGAGCTGGTGATCAATGCTGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGgcg < 1:2325173/151‑1 (MQ=255) cgcgCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTCGCGTGGTAGTTGGAGCt > 2:5803941/1‑151 (MQ=255) cgcgCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCt < 1:6913377/151‑1 (MQ=255) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGGCGGCACCACCGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc > 2:699446/1‑151 (MQ=255) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc > 1:6418346/1‑151 (MQ=255) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc < 2:6488929/151‑1 (MQ=25) gcCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTAcc > 1:3985965/1‑151 (MQ=255) cccGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCg < 1:1980876/151‑1 (MQ=255) ccGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCgg > 1:5599796/1‑151 (MQ=255) ccGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCgg > 2:6110863/1‑151 (MQ=255) ccGACAGCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCgg < 2:1437586/151‑1 (MQ=255) cGACATCACCGCCCGTGCCGCGCCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGc < 2:6824823/151‑1 (MQ=255) gACATCACCGCCCCGGGCGCACCGCCCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCa < 1:7035412/151‑1 (MQ=255) cATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGc > 1:676516/1‑151 (MQ=255) aTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCt > 1:2699085/1‑151 (MQ=255) aTCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCt > 1:1791626/1‑151 (MQ=255) aCCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGACCCGGGCAGCCCCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGAGGTCGTTGGCGCTACCGGCAGCTTCa > 2:5174331/1‑151 (MQ=11) ccccTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCAt > 2:1919076/1‑151 (MQ=255) cTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCAc > 1:2176750/1‑151 (MQ=21) ccGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCt > 1:6547013/1‑151 (MQ=19) ccGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCt < 2:3861355/151‑1 (MQ=21) accgaccgAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAc > 1:5472768/1‑151 (MQ=255) accgaccgAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAc > 2:5608888/1‑151 (MQ=19) ccgaccgaGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAcc < 1:5296528/151‑1 (MQ=255) cGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGAccc < 2:5940044/151‑1 (MQ=21) accGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGACCCGc < 1:1521250/149‑1 (MQ=18) | CGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGCACCGTACGCGTGCTGGCCGCCGACGGCACCACTGTGCTGGGTAGCGTGGTAGTTGGCGCTACCGGCAGCTTCAGCATCACCCTCGACCCGCCA > CP009974/1158262‑1158550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |