| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,247,078 | G→C | intergenic (‑212/‑599) | RPPX_05495 ← / → RPPX_05500 | glutamyl‑tRNA reductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,247,078 | 0 | G | C | 98.6% | 701.1 / ‑2.0 | 209 | intergenic (‑212/‑599) | RPPX_05495/RPPX_05500 | glutamyl‑tRNA reductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base C (89/116); total (91/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 224 total aligned reads displayed.
ACCGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGT > CP009974/1246930‑1247226 | ccGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcagg < 1:2957347/151‑1 (MQ=255) cGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcaggg > 1:4436892/1‑151 (MQ=255) cGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcaggg < 1:4243505/151‑1 (MQ=255) gTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcaggga < 1:2122893/151‑1 (MQ=255) ttCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcagggag < 2:1008589/151‑1 (MQ=255) ttCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCCTTTGCTCTGGCTTTTGATCCTGACTTTCCTCTTCGCGACTTCACGAGGCCCCACGCAGGCCTTCCgcagggag > 2:5600512/1‑151 (MQ=255) tCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGcagggagg > 1:6893471/1‑151 (MQ=255) cGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGt < 1:5759727/151‑1 (MQ=255) cGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGt > 1:3095593/1‑151 (MQ=255) cTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGa < 1:4355208/151‑1 (MQ=255) cTATTGTGCTGATAATCCTTCTGCTATCGCCTTTTCGTAGCCTGCCCTAGCAATGTTTTCAGGTCTTGCAGGCTTTTGAACTAGCTTATGATCCTAACCTTGAACTTCGCGACATCAGGAGGCCGAACGCAGACCATGCGCAGGGAGGtaa < 2:3015702/151‑3 (MQ=255) tATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGCGGCCGAACGCAGGCCTTGCGCAGGGAGGTGAc > 2:4395397/1‑151 (MQ=255) tATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGAc > 1:6421118/1‑151 (MQ=255) aTTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGGGACg > 1:5644742/1‑151 (MQ=255) cTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATg < 2:6099705/151‑1 (MQ=255) gATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGa > 2:1204617/1‑151 (MQ=255) gATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGa > 2:314207/1‑151 (MQ=255) gTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGcc > 1:5434525/1‑151 (MQ=255) tCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGccc < 1:4450088/151‑1 (MQ=255) tCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGccc < 2:3068069/151‑1 (MQ=255) ccTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCg < 1:4732960/151‑1 (MQ=255) ccTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCg < 1:3172417/151‑1 (MQ=255) cTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGt < 1:4960623/151‑1 (MQ=255) tGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTc < 2:3952095/151‑1 (MQ=255) ggCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAg < 2:672203/151‑1 (MQ=255) gCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgc < 2:5219486/151‑1 (MQ=255) gCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgc < 2:6171616/151‑1 (MQ=255) tATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgcgc > 1:6800918/1‑151 (MQ=255) cGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgt > 1:3961805/1‑150 (MQ=255) gCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgtg < 2:3037351/151‑3 (MQ=255) gCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAACCGCTgtg > 2:3281659/1‑149 (MQ=255) tCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAg < 2:173162/151‑1 (MQ=255) gTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGa < 2:1040966/151‑1 (MQ=255) tAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCCTCAAGCGCTG‑TGCCCCAGGAt > 2:7172859/1‑151 (MQ=255) cTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATgggg < 1:3316268/151‑1 (MQ=255) cccTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCTGGACCTTGATCTTCTCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCt < 2:6949374/151‑1 (MQ=17) ccTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTg > 2:3355989/1‑151 (MQ=255) cTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGc > 1:1330621/1‑151 (MQ=255) cTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGc < 1:6283318/151‑1 (MQ=255) gCGGTGTTGTCGGGTCGTGCCGGCTTTGGATCTGGCTTTTGATCCTGGCCTTGATCTTCGCGGCTTCAGGAGGCCGAACGCGGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAgc < 2:6488821/151‑1 (MQ=14) tgtTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCgg < 2:4784282/151‑1 (MQ=255) tgtTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCgg < 1:1865692/151‑1 (MQ=255) ttttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtc < 1:76606/151‑1 (MQ=255) tCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCCGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCGCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcctc > 2:1952819/1‑151 (MQ=17) aGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTTGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGAGGGGCATGGATGCCCGGCAAGCGCTG‑GGCCCCAGGATGTGGCCTGCAGCGGGGTCCTccc > 1:3515245/1‑151 (MQ=17) ggTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCg < 2:2763899/151‑1 (MQ=255) ggTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCg > 2:331853/1‑151 (MQ=255) ttGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAg < 1:1507121/151‑1 (MQ=255) gCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCa > 1:1289877/1‑151 (MQ=255) gcGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCaa < 2:4308745/150‑1 (MQ=255) ccGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGATGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCaa < 2:6393537/151‑1 (MQ=14) ccGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCa < 2:251036/130‑1 (MQ=14) cGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAg < 1:3084236/151‑1 (MQ=255) ggCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGc < 1:1799061/151‑1 (MQ=255) ttttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCt > 1:587018/1‑151 (MQ=255) tttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGAGGGCCTCCCGGGCGCCAGCCCTa > 2:1348083/1‑151 (MQ=14) ttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTAc > 1:5184796/1‑151 (MQ=255) aTCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCt < 1:1422741/151‑1 (MQ=255) cTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCg > 1:5075815/1‑151 (MQ=255) cTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCg < 1:3307362/151‑1 (MQ=255) cTGGCTTTTGATCCTGACCTTGATCGTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCg < 2:3829623/151‑1 (MQ=255) tGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCgg < 1:1657470/151‑1 (MQ=255) cTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGcct < 1:3567454/151‑1 (MQ=255) tttGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGcctcc < 2:1328926/151‑1 (MQ=255) tttGAGCGTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCAGTCCTCCCGGGAGCAAGCCCTACGCTCGGcctcc < 2:5091402/151‑1 (MQ=17) tGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTg < 1:3609569/151‑1 (MQ=255) gATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGa > 2:4505681/1‑151 (MQ=255) aTCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCACGCCCTACGCTCGGCCTCCTGaa > 2:2131418/1‑151 (MQ=17) aTCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGaa > 1:861138/1‑151 (MQ=255) ccTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGt > 2:6229635/1‑151 (MQ=255) tGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCg < 2:321384/151‑1 (MQ=255) ccTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCac > 2:3741390/1‑150 (MQ=255) ccTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCaa < 1:2502514/151‑1 (MQ=255) cTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAAt < 1:4098766/151‑1 (MQ=255) aTCTTCGCGACTTCAGGAGGCCGACCGCAAGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGCCCTCCCGGGAGCAACCCCTACGCTCGGCCTCCTTAAGCCGCAACCTGc > 2:1488680/1‑151 (MQ=17) tCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAgcg > 1:1182958/1‑151 (MQ=255) tCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAgcg < 2:4676776/151‑1 (MQ=255) cgACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCt < 1:6093080/151‑1 (MQ=255) gACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTg > 1:1807380/1‑151 (MQ=255) ttCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATc > 1:3843395/1‑151 (MQ=255) ttCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATc < 2:1803526/151‑1 (MQ=255) ttCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACCCCCGGCCTCCCGAAGTCCCAATCTGCAGCGCCCGATc > 2:4203084/1‑151 (MQ=17) tCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCa > 1:277669/1‑151 (MQ=255) cAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCaa > 2:7076775/1‑151 (MQ=255) ggaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAAcc < 1:6452063/151‑1 (MQ=255) ggaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCAGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTCCGCTCGGCCTCCTGCAGTCGCCATCTGCAGCGGCTGACCAAcc > 1:3890635/1‑151 (MQ=17) gaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACcg > 1:6954537/1‑151 (MQ=255) gggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGAGGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACcgc < 1:4124945/150‑1 (MQ=21) gCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACcgcgc < 2:587018/151‑1 (MQ=255) cGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCgcgcgc > 1:2210053/1‑151 (MQ=255) cGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCgcgcgc > 2:1398471/1‑151 (MQ=255) gAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCt > 1:6635988/1‑151 (MQ=255) aaCGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCtt > 2:5650945/1‑151 (MQ=255) aCGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTa > 1:6770900/1‑151 (MQ=255) cGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCCTAg > 2:2466337/1‑151 (MQ=255) gCAGGCCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCGCAGGATGGGGCCTGCAGCGCGGTGCTCCCGGGCGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAACCTCCAGCGTCTGACCACCCgcgcgcccgca > 2:3624789/1‑146 (MQ=17) cAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGaa > 2:2401861/1‑151 (MQ=255) ccTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGa < 1:263648/151‑1 (MQ=255) cTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGAc > 2:1665245/1‑151 (MQ=255) gcgcAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGt > 1:3837769/1‑151 (MQ=255) | ACCGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGT > CP009974/1246930‑1247226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |