Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,449,631 T→C intergenic (+144/‑45) RPPX_06395 → / → RPPX_06400 chemotaxis protein/thiol:disulfide interchange protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,449,6310TC100.0% 1188.0 / NA 334intergenic (+144/‑45)RPPX_06395/RPPX_06400chemotaxis protein/thiol:disulfide interchange protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (182/152);  total (182/152)

Only 100 of 336 total aligned reads displayed.

TCTGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGTGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCTTCG  >  CP009974/1449483‑1449777
                                                                                                                                                    |                                                                                                                                                  
tCTGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTgcgc                                                                                                                                                  <  1:483233/151‑1 (MQ=255)
  tGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCAt                                                                                                                                                >  2:4925739/1‑151 (MQ=255)
  gcattccgcgaGTGGTCGCCGGCACAGGGGTACCAACTGCAGAGTGTGTGACGTCATATGTGTTGCGTCGGGGACATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTCCGTTTGTTTCGGGCCAATTATTCCTGCGCAt                                                                                                                                                <  2:6511433/144‑1 (MQ=18)
    aGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATcc                                                                                                                                              <  1:213640/151‑1 (MQ=255)
    aGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATcc                                                                                                                                              <  1:3819437/151‑1 (MQ=255)
    aGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATcc                                                                                                                                              >  1:6333474/1‑151 (MQ=255)
    aGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATcc                                                                                                                                              >  1:5740347/1‑151 (MQ=255)
     gTCGGCGGGTGGTCGCCAGGACAGGTGTAGCGACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCg                                                                                                                                             <  2:2247346/151‑1 (MQ=255)
      tCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAACTATTCCTGCGCATCCGt                                                                                                                                            >  2:6736464/1‑151 (MQ=255)
        ggcggGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTa                                                                                                                                          >  1:6500955/1‑151 (MQ=255)
                  cGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCggg                                                                                                                                >  2:6023529/1‑151 (MQ=255)
                   gCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTTTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGTCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGTGCCAATTATTCCTTCGCATCCGTTATCATGCCTGGc                                                                                                                               >  2:2855375/1‑151 (MQ=25)
                   gCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGc                                                                                                                               <  2:1561823/151‑1 (MQ=255)
                      aGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACg                                                                                                                            >  2:2904264/1‑151 (MQ=255)
                      aGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGCGCACg                                                                                                                            >  1:1811394/1‑151 (MQ=255)
                      aGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTGTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACg                                                                                                                            <  2:3772890/151‑1 (MQ=255)
                           aGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCGACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCCTGCTGGGCACGTTCCa                                                                                                                       >  1:1044316/1‑151 (MQ=255)
                             gtgtAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCAcc                                                                                                                     <  2:2644482/151‑1 (MQ=255)
                             gtgtAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCAcc                                                                                                                     >  1:1117295/1‑151 (MQ=255)
                                  gCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTcgcg                                                                                                                >  2:1892033/1‑151 (MQ=255)
                                     aCTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGt                                                                                                             >  2:200956/1‑151 (MQ=255)
                                        gAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGCGTccc                                                                                                          >  1:471960/1‑150 (MQ=255)
                                        gAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTccc                                                                                                          >  2:1394500/1‑150 (MQ=255)
                                        gAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTccc                                                                                                          >  2:4784178/1‑150 (MQ=255)
                                        gAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCg                                                                                                          >  2:6452220/1‑151 (MQ=255)
                                        gAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCg                                                                                                          >  1:5496051/1‑151 (MQ=255)
                                         aaGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGc                                                                                                         >  2:1882119/1‑151 (MQ=255)
                                          agagGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGcc                                                                                                        <  1:5417412/151‑1 (MQ=255)
                                           gagGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCa                                                                                                       >  2:844196/1‑151 (MQ=255)
                                            agGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCAt                                                                                                      <  2:5453314/151‑1 (MQ=255)
                                            agGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCAt                                                                                                      >  1:2615291/1‑151 (MQ=255)
                                            agGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTGTCGGGCCAATTATTCCTGCGGATCCGTTATCATGCCGGGCACGTGCCACCGCGCGAGTCCGCCAt                                                                                                      >  2:4493892/1‑151 (MQ=255)
                                             gggTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATg                                                                                                     >  1:1001398/1‑151 (MQ=255)
                                               gTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATgcg                                                                                                   <  1:199453/151‑1 (MQ=255)
                                                tttGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATgcgc                                                                                                  >  1:949321/1‑151 (MQ=255)
                                                 ttGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGGGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgcc                                                                                                 <  1:1901852/151‑1 (MQ=255)
                                                 ttGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgcc                                                                                                 >  2:5568638/1‑151 (MQ=255)
                                                  tGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCgg                                                                                                                                 >  1:5154799/1‑118 (MQ=255)
                                                   gACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgcccc                                                                                               >  1:4499332/1‑149 (MQ=255)
                                                    aCGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCgccgcc                                                                                              <  2:3126004/151‑1 (MQ=255)
                                                    aCGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCgccgcc                                                                                              >  2:6622152/1‑151 (MQ=255)
                                                     cGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCCTGCgccgccc                                                                                             >  2:3567836/1‑150 (MQ=255)
                                                     cGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCCTGCGCCGCCt                                                                                             >  1:3571048/1‑151 (MQ=255)
                                                      atGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTg                                                                                            >  1:3322110/2‑151 (MQ=255)
                                                           atGTGTTGGGTCTGGGAGATCGAGCGCGGCCCGCGCGGCGCTTCGCGGGTAAACCCGCGCCTACGGTTGTTTCGGGCCAATTGTGCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGttttt                                                                                       <  1:5280600/151‑1 (MQ=25)
                                                            tgtgTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTc                                                                                      <  1:1666198/151‑1 (MQ=255)
                                                               gtTGCGTCTGGGTGCTCTCGGGCGGCCCGTCCCGCGCGTCGCGGCTAAACCCGCTCCTACGTTTGTTGCGGGCCAATTAGTCCTGCGCATCCGTTATCATGCCGTGCGCGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATg                                                                                   <  2:709663/151‑1 (MQ=25)
                                                                    gTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGtt                                                                              <  1:7175636/151‑1 (MQ=255)
                                                                    gTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTGTGTCTCGGGCCAATAAATCCTGCGCATCCGTTATCATGCCGGGCCGGTTCCACCTCCCGAGACCGCCATGCGCCGCCTGTGTTTCATGCTCtt                                                                              >  2:6817852/1‑151 (MQ=21)
                                                                      cTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGGCATGCGCCGCCTGTTTTTCATGCTGTTcc                                                                            >  2:2082845/1‑151 (MQ=255)
                                                                      cTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTcc                                                                            >  2:1802361/1‑151 (MQ=255)
                                                                       tGGGAGATCGAGCGGCGCCCGGGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCAGGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCct                                                                           <  2:5711763/151‑1 (MQ=255)
                                                                       tGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCct                                                                           <  1:2897493/151‑1 (MQ=255)
                                                                       tGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCct                                                                           >  2:1684375/1‑151 (MQ=255)
                                                                            gaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgccgc                                                                                               <  2:2997034/126‑1 (MQ=255)
                                                                            gaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCctgctgc                                                                      >  1:4131529/1‑151 (MQ=255)
                                                                              tCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATg                                                                                                     >  2:5042327/1‑118 (MQ=255)
                                                                              tCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATg                                                                                                     <  1:5042327/118‑1 (MQ=255)
                                                                              tCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCctgctgctg                                                                    <  2:2570005/151‑1 (MQ=255)
                                                                              tCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCctgctgctg                                                                    <  1:876333/151‑1 (MQ=255)
                                                                                gAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGc                                                                  <  2:6366481/151‑1 (MQ=255)
                                                                                 aGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGcc                                                                 <  2:1001398/151‑1 (MQ=255)
                                                                                    gccgccCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCCTGCGCCGCCTGTTTTTCATCCTGTTCCTGCTGCTGGCCAGc                                                              >  1:4903208/1‑151 (MQ=255)
                                                                                     ccgcccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGcc                                                             <  1:5767014/151‑1 (MQ=255)
                                                                                           gcgcgGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGCGTCCGCCATGCGCCGCCCGCTTTTCATGCCGCTCCTCCTGCTGGCCCGCCCTGCCt                                                       >  1:5084759/1‑151 (MQ=37)
                                                                                           gcgcgGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGCTCCACCTCGCGGGCCCGCCACGCGCCGCCCGTTCTTCATCCTGTTCCTGCTGCTGCCCCGCCCTGCCt                                                       >  1:4075433/1‑151 (MQ=25)
                                                                                            cgcgGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCtt                                                      >  1:6884249/1‑151 (MQ=255)
                                                                                             gcggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTc                                                     <  1:1573151/151‑1 (MQ=255)
                                                                                              cggcgCTTCGCGGGTAAACCCGCTCCTACCTTTGTTTCGGCCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCCCCGCCTGTTTTTCCTGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcg                                                    >  2:3985868/1‑151 (MQ=255)
                                                                                               ggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcgc                                                   >  2:1330208/1‑151 (MQ=255)
                                                                                                 cgcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcgccg                                                 <  2:1185890/151‑1 (MQ=255)
                                                                                                 cgcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcgccg                                                 <  2:2960252/151‑1 (MQ=255)
                                                                                                     tCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAgg                                             <  1:4574872/151‑1 (MQ=255)
                                                                                                      cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCCGCCTTCGCCCCAGGc                                            >  2:1494872/1‑151 (MQ=255)
                                                                                                      cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCCCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCCGCCCTGCCCTCGCCGCAGGc                                            >  2:5870880/1‑151 (MQ=255)
                                                                                                       gcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTCCTGCTGCCCAGCCCTGCCTTCGCCGCCGGcc                                           >  2:4641592/1‑151 (MQ=255)
                                                                                                        cgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCt                                          >  1:6732619/1‑151 (MQ=255)
                                                                                                            tAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTc                                      <  1:4144670/151‑1 (MQ=255)
                                                                                                                 ccGCTCGTACGTGTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACaa                                 <  2:6640200/151‑1 (MQ=255)
                                                                                                                 ccGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCCCGACac                                 >  2:3042377/1‑150 (MQ=255)
                                                                                                                    cTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCCGCCTTCCCCGCAGGCCCGCCCGaccaccc                              >  2:728863/1‑150 (MQ=255)
                                                                                                                     tCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCTACAACCGc                             >  2:5266013/1‑151 (MQ=255)
                                                                                                                      ccTACGTTTGTTGCGGGCCAATTGTGCCTGCGCATCGGTAAGCATGCCGGGCACGTTCCCCCTCGCGAGTCCGCCATGCGCGGCCTGTTTTTCATGCTGTGCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGcc                            <  2:5170850/151‑1 (MQ=255)
                                                                                                                         aCGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCa                         <  2:431717/151‑1 (MQ=255)
                                                                                                                                 ttCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCCGGCCTGCTCGCCAACCGCCCCAGCGCCAcc                 >  2:3389308/1‑151 (MQ=255)
                                                                                                                                  tCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCAccc                <  1:589269/151‑1 (MQ=255)
                                                                                                                                    gggCCAATTATTCCGTCTCATCCGTTATCATGCCGGGCACGTGCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCtt              <  2:4038414/151‑1 (MQ=255)
                                                                                                                                     ggCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCttc             >  1:2516618/1‑150 (MQ=255)
                                                                                                                                     ggCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTg             <  1:2228570/151‑1 (MQ=255)
                                                                                                                                       ccAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgc           >  1:1437903/1‑151 (MQ=255)
                                                                                                                                        cAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgcg          >  1:3474632/1‑151 (MQ=255)
                                                                                                                                        cAATGATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgcg          <  2:4736580/151‑1 (MQ=255)
                                                                                                                                         aaTTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgcgc         >  1:3985085/1‑151 (MQ=255)
                                                                                                                                          attattCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGcgcc        <  1:6604981/151‑1 (MQ=255)
                                                                                                                                          attattCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCCCCCCAGCGCCACCCTTGGcgcc        >  2:6967288/1‑151 (MQ=255)
                                                                                                                                           ttattCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGcgccg       <  1:3272289/151‑1 (MQ=255)
                                                                                                                                              ttCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCtt    <  2:6151809/151‑1 (MQ=255)
                                                                                                                                              ttCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCtt    <  1:6107887/151‑1 (MQ=255)
                                                                                                                                               tCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCTTc   <  2:3833108/151‑1 (MQ=255)
                                                                                                                                               tCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCTTc   <  2:4176484/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TCTGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGTGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCTTCG  >  CP009974/1449483‑1449777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑