BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	1,554,990	A→G	D139D (GAT→GAC)	tuf ←	elongation factor Tu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	1,554,990	0	A	G	100.0%	620.5 / NA	224	D139D (GAT→GAC)	tuf	elongation factor Tu
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (106/118); total (106/118)

Only 100 of 224 total aligned reads displayed.

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

cATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACg                                                                                                                 <  1:2343910/151‑1 (MQ=11)

 aTACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGc                                                                                                                >  2:3900705/1‑151 (MQ=14)

  tACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGcc                                                                                                               >  2:3288210/1‑151 (MQ=14)

  tACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGcc                                                                                                               <  1:4791711/151‑1 (MQ=14)

   aCGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCt                                                                                                              <  2:3412911/151‑1 (MQ=14)

     gAGCGGAGGCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTAc                                                                                                            <  2:4766192/151‑1 (MQ=12)

       gCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCt                                                                                                          >  2:5133271/1‑151 (MQ=17)

       gCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCt                                                                                                          >  2:4150369/1‑151 (MQ=14)

       gCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCt                                                                                                          <  2:1541693/151‑1 (MQ=17)

       gCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCt                                                                                                          >  2:6811927/1‑151 (MQ=14)

          gAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGAc                                                                                                       <  2:1551322/151‑1 (MQ=17)

          gAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGAc                                                                                                       <  2:6154981/151‑1 (MQ=14)

             ccGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACggg                                                                                                    <  1:5036180/151‑1 (MQ=17)

                atgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAca                                                                                                 <  1:3309654/151‑1 (MQ=17)

                atgatgatCGGAGCGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGACGTACGGAACGCCTACCTGACGGGAca                                                                                                 >  2:4398856/1‑151 (MQ=9)

                 tgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTCGTTCAGGAAGACCACGATGTACGGAACGCCAACCTGACGGGGcag                                                                                                >  1:536111/1‑151 (MQ=9)

                  gatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagc                                                                                               <  2:183858/151‑1 (MQ=17)

                  gatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagc                                                                                               <  2:1204254/151‑1 (MQ=17)

                   atgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagca                                                                                              <  2:5770861/151‑1 (MQ=17)

                    tgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagcag                                                                                             <  2:3451150/151‑1 (MQ=14)

                    tgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagcag                                                                                             <  1:6216181/151‑1 (MQ=17)

                      atCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGa                                                                                           <  1:4733042/151‑1 (MQ=17)

                      atCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGa                                                                                           >  1:5279177/1‑151 (MQ=17)

                       tCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAt                                                                                          <  2:3357372/151‑1 (MQ=14)

                       tCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAt                                                                                          <  2:5789436/151‑1 (MQ=17)

                         ggAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtgt                                                                                        <  1:6911976/151‑1 (MQ=17)

                         ggAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtgt                                                                                        >  1:1630921/1‑151 (MQ=17)

                           aGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGc                                                                                      <  2:1080225/151‑1 (MQ=17)

                              gtcgtcGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCa                                                                                   <  2:1943029/151‑1 (MQ=17)

                              gtcgtcGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCa                                                                                   <  2:5201500/151‑1 (MQ=17)

                              gtcgtcGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCa                                                                                   >  2:5917304/1‑151 (MQ=17)

                               tcgtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCAc                                                                                  <  1:6126851/151‑1 (MQ=17)

                               tcgtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCAc                                                                                  <  2:6741874/151‑1 (MQ=17)

                                cgtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACg                                                                                 >  2:2371292/1‑151 (MQ=17)

                                cgtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACg                                                                                 <  1:4150369/151‑1 (MQ=14)

                                 gtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCAcag                                                                                >  1:7166692/1‑149 (MQ=14)

                                 gtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACgg                                                                                >  1:1065753/1‑151 (MQ=17)

                                  tcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACggg                                                                               >  2:4649071/1‑151 (MQ=17)

                                     ccTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGttt                                                                            >  1:2897950/1‑151 (MQ=17)

                                     ccTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGttt                                                                            <  2:2752278/151‑1 (MQ=17)

                                     ccTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGttt                                                                            <  1:5316806/151‑1 (MQ=17)

                                      cTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtg                                                                           <  1:6478025/151‑1 (MQ=17)

                                      cTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtg                                                                           <  1:4060335/151‑1 (MQ=17)

                                        gggAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgtg                                                                         >  1:17296/1‑151 (MQ=18)

                                        gggAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgtg                                                                         <  1:6433289/151‑1 (MQ=18)

                                          gAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGGTTGTGGc                                                                       >  2:7043162/1‑151 (MQ=18)

                                                gTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGa                                                                 >  2:2461844/1‑151 (MQ=21)

                                                    gTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCAt                                                             <  1:1310262/151‑1 (MQ=25)

                                                    gTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCAt                                                             <  2:1815333/151‑1 (MQ=21)

                                                     tGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATc                                                            >  2:7074875/1‑151 (MQ=18)

                                                         cagcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcg                                                        <  1:1370081/151‑1 (MQ=25)

                                                         cagcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcg                                                        <  2:3199078/151‑1 (MQ=25)

                                                         cagcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcg                                                        <  2:2387872/151‑1 (MQ=25)

                                                             agGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCg                                                    >  2:1544672/1‑151 (MQ=25)

                                                              ggTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGa                                                   >  2:2158350/1‑151 (MQ=21)

                                                               gTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAg                                                  <  1:6786473/151‑1 (MQ=25)

                                                                  gcgAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCaa                                               <  1:5133271/151‑1 (MQ=25)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCCGGTCAGCCCTGTTCAGGAAGACCACGATGTACGGCACGCCTCCCTGCCGGCACAGCAGGATGTGCTCACGGGCTTGTGGCCTCGGACCACCGGCGGCCgccccaac                                             >  2:5382471/1‑144 (MQ=11)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  2:4928855/1‑151 (MQ=18)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  2:6689681/1‑151 (MQ=21)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  1:3391704/1‑151 (MQ=25)

                                                                      aCTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCa                                           <  1:1933292/151‑1 (MQ=25)

                                                                        ttCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAgg                                         >  2:5436924/1‑151 (MQ=21)

                                                                         tCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGa                                        >  1:828693/1‑151 (MQ=18)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  2:4808995/151‑1 (MQ=25)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  2:636140/151‑1 (MQ=25)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  2:5234988/151‑1 (MQ=25)

                                                                           cATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCAACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATc                                      <  1:960559/151‑1 (MQ=25)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     <  2:6488526/151‑1 (MQ=37)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     >  1:3901662/1‑151 (MQ=37)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     >  1:4588419/1‑151 (MQ=37)

                                                                               tcGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCgcgc                                  >  2:807766/1‑151 (MQ=38)

                                                                                cGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGcc                                 >  1:4471929/1‑151 (MQ=255)

                                                                                 gACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCg                                <  2:3974445/151‑1 (MQ=255)

                                                                                 gACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCg                                >  2:5656552/1‑151 (MQ=255)

                                                                                 gACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCg                                <  2:2060967/151‑1 (MQ=255)

                                                                                 gACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCg                                >  1:1016174/1‑151 (MQ=255)

                                                                                  aCCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGt                               <  1:4860407/151‑1 (MQ=255)

                                                                                   ccAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTc                              >  1:4653844/1‑151 (MQ=255)

                                                                                      gTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCAt                           >  2:5158441/1‑151 (MQ=255)

                                                                                        tCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCt                         <  1:1440586/151‑1 (MQ=255)

                                                                                        tCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGACCGCGCCGTCCATCt                         >  2:5855467/1‑151 (MQ=255)

                                                                                         ccAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTg                        >  1:6399352/1‑151 (MQ=255)

                                                                                          cagcagCTCAGCGTCGTCTGCCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTgg                       <  2:5950321/151‑1 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcag                   <  1:3928770/151‑1 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcag                   <  1:1524037/151‑1 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcag                   >  1:4309589/1‑151 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcag                   >  1:5328233/1‑151 (MQ=255)

                                                                                               gcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTCCCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcagc                  <  2:6900567/151‑1 (MQ=255)

                                                                                                 tCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCTGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAc                >  1:4552990/1‑151 (MQ=255)

                                                                                                 tCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAc                >  2:5288500/1‑151 (MQ=38)

                                                                                                 tCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAc                >  1:6017380/1‑151 (MQ=255)

                                                                                                  cAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAcc               <  1:2554889/151‑1 (MQ=255)

                                                                                                  cAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAcc               >  1:4281454/1‑151 (MQ=255)

                                                                                                     cgtcgtCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGt            >  1:5871290/1‑151 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           >  2:1748874/1‑151 (MQ=255)

                                                                                                       tcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCAGTGa          <  1:5690760/151‑1 (MQ=255)

                                                                                                          tcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCa       <  1:2474244/151‑1 (MQ=255)

                                                                                                              ccAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGtt   <  2:3662666/151‑1 (MQ=255)

                                                                                                               cAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGttc  >  1:7071033/1‑151 (MQ=255)

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`