BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	1,920,794	G→T	intergenic (‑423/+132)	RPPX_08560 ← / ← RPPX_08565	16S ribosomal RNA/CoA‑transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	1,920,794	0	G	T	100.0%	251.5 / NA	107	intergenic (‑423/+132)	RPPX_08560/RPPX_08565	16S ribosomal RNA/CoA‑transferase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (52/55); total (52/55)

Only 100 of 108 total aligned reads displayed.

CTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTTGATCGTAGCCCTTACAGC‑‑A‑‑CCTTCCG‑‑AATCGTCTAACTCATTGAATCTCAAGGAGTTTGTCGTTCCGTTGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACACCAGCA  >  CP009974/1920691‑1920941

cTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCgag                                                                                                      >  1:6637093/1‑151 (MQ=2)

 ttGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCgaga                                                                                                     <  2:5024406/151‑1 (MQ=2)

 ttGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCgaga                                                                                                     <  1:3046133/151‑1 (MQ=2)

  tGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGagag                                                                                                    >  1:4119053/1‑151 (MQ=2)

  tGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGagag                                                                                                    <  2:1303239/151‑1 (MQ=2)

   ggAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAgg                                                                                                   >  2:1995508/1‑151 (MQ=2)

     aaGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGc                                                                                                 <  2:1388119/151‑1 (MQ=2)

     aaGCGCTGTCAACCATCATCTCAACCGCTGTCGATCATTCGACCGTAGCCCCTCCAG‑‑‑‑‑‑CTTTCCGTTCACTACTTAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGc                                                                                                 <  2:6839121/151‑1 (MQ=2)

      aGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCg                                                                                                >  2:2341582/1‑151 (MQ=2)

       gcgcTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGC‑‑TTTCCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGt                                                                                               <  2:6916290/151‑1 (MQ=2)

        cgcTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTc                                                                                              >  1:5042906/1‑151 (MQ=2)

        cgcTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTc                                                                                              <  1:378604/151‑1 (MQ=2)

        cgcTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTc                                                                                              <  2:3333348/151‑1 (MQ=11)

         gcTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCa                                                                                             <  1:1907446/151‑1 (MQ=2)

         gcTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCa                                                                                             <  2:5607361/151‑1 (MQ=2)

          cTGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCaa                                                                                            >  1:1123933/1‑151 (MQ=2)

           tGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAAc                                                                                           >  1:398788/1‑151 (MQ=2)

           tGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTAGGGCGCATTATAAGGGGATTCGAGAGGCCGTCAAc                                                                                           >  2:6976465/1‑151 (MQ=2)

           tGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGC‑‑TTTCCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAAc                                                                                           <  2:1509129/151‑1 (MQ=2)

           tGTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGC‑‑TTTCCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAAc                                                                                           <  2:4593901/151‑1 (MQ=2)

            gTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCTTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAAcc                                                                                          >  2:4166387/1‑151 (MQ=2)

            gTCAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAAcc                                                                                          >  1:753115/1‑151 (MQ=2)

             tCAACCATCCTCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCt                                                                                         <  2:334291/151‑1 (MQ=2)

              cAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCtt                                                                                        <  1:5295128/151‑1 (MQ=2)

              cAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCtt                                                                                        <  2:3530100/151‑1 (MQ=2)

              cAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCtt                                                                                        <  2:3530084/151‑1 (MQ=2)

              cAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCtt                                                                                        <  1:139030/151‑1 (MQ=2)

              cAACCATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCtt                                                                                        <  2:3530059/151‑1 (MQ=2)

                 ccATCATCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTaa                                                                                     <  1:1968699/151‑1 (MQ=2)

                  catcatCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAAt                                                                                    <  1:6156517/151‑1 (MQ=11)

                  catcatCTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAAt                                                                                    <  1:2222535/151‑1 (MQ=2)

                   atcatcTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAAtt                                                                                   <  2:1170669/151‑1 (MQ=2)

                    tcatcTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAAttt                                                                                  >  2:486889/1‑151 (MQ=2)

                     catcTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCCACCTTTAATTTc                                                                                 <  2:3282127/151‑1 (MQ=2)

                     catcTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTc                                                                                 >  1:5315539/1‑151 (MQ=2)

                     catcTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTc                                                                                 <  1:3454916/151‑1 (MQ=2)

                     catcTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTc                                                                                 <  2:6943394/151‑1 (MQ=2)

                      atcTCAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCa                                                                                <  1:1993058/151‑1 (MQ=11)

                          cAACCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATaa                                                                            <  2:5330912/151‑1 (MQ=11)

                           aaCCGCTTTCGATCATTCGACCGTAGCCCCTCCAGCTTT‑‑CCTTTC‑‑‑ACTACT‑TAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAAc                                                                           <  1:7102878/151‑1 (MQ=11)

                                                                             cactacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCt                               >  2:3312730/8‑151 (MQ=255)

                                                                             cactacttAACTCATTGAATCTCAAGGAGTTTTTCGTGCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCt                               <  1:3296899/144‑1 (MQ=21)

                                                                             caatacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCt                               >  2:951613/8‑151 (MQ=255)

                                                                              actacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTTGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTc                              >  2:3297114/7‑151 (MQ=21)

                                                                              actacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTc                              >  2:1076060/7‑151 (MQ=255)

                                                                               ctacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTcc                             >  2:2526487/6‑151 (MQ=255)

                                                                               ctacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTcc                             >  2:5426297/6‑151 (MQ=255)

                                                                                tacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTccc                            >  1:1692815/5‑151 (MQ=255)

                                                                                tacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTccc                            >  1:5984130/5‑151 (MQ=255)

                                                                                tacttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTccc                            >  2:158563/5‑151 (MQ=255)

                                                                                 acttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTcccc                           <  1:3847903/148‑1 (MQ=255)

                                                                                 acttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTcccc                           >  1:3590958/4‑151 (MQ=255)

                                                                                  cttAACGCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAAACATTGATAGCACAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCg                          <  2:2844059/149‑1 (MQ=18)

                                                                                   ttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGc                         <  1:5972787/150‑1 (MQ=255)

                                                                                   ttAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGc                         <  1:3508673/150‑1 (MQ=255)

                                                                                    tAACTCATTGAATCTCAAGGAGTTTTTCGTTCTGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCt                        >  2:3780290/1‑151 (MQ=255)

                                                                                    tAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCt                        <  1:2065804/151‑1 (MQ=255)

                                                                                    tAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCt                        >  1:4663587/1‑151 (MQ=255)

                                                                                    tAACTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCt                        >  1:1701042/1‑151 (MQ=255)

                                                                                    tAACTCATTGAATCTCAAGGAGGTTTTCGTTCCGCTGTCGCTGGAAGTGGCGCGCATTCTCACGGGAACCGAGAGGGCGTCCACCTTTAGTTTCAAAAACAGTTGCTAGCGCAAGAAAAACAAAGCGGGGAGCCCGGAAGGCCGCCCCGcc                        >  2:4273976/1‑150 (MQ=12)

                                                                                     aaCTAATTTAATCACAAGGAGTTATTCGTTGCGATGTCGCGGGAAGTGGGGCGCATTATAAGGGAATTCGAGAGGGCGTCAACCTTTAATTTCAATATCCGTAGATAAAGAAAAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTa                       <  2:4622618/151‑1 (MQ=18)

                                                                                      aCTCATTGAATCTCAAGGAGTTTTTCGTTCCTATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATCCGAGAGGGCGTCAACCTTTAATTTCAATAACTGTTGATAGCGCAGAAAAAACAAAGCGGGGTGGCCTGACGGCCCCCTCCCTAt                      >  2:872366/1‑151 (MQ=18)

                                                                                      aCTCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCCGGAAGTGGGGCGCATTATACGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCACAGAAAAACCAAAGCGGGGCGGCCTGGCGGCCCACCCGCTAt                      >  2:4875153/1‑151 (MQ=18)

                                                                                       ctggttGACTCTCAAGGAGTTTTTCGTTCCGCTGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTAtt                     <  2:5680231/147‑1 (MQ=255)

                                                                                       cTCATTGAATCTCAAGGAGTTTTTCGTTCTTATTTCGCTGGAAGTGGGGCGCATTATAAGGCGATTCGAGAGGGCGGCAACCTTTAATTTCAATAACCGTTGATAGCGCAGACAAAACAAAGCGCGGCGGCCTGCCGGCCTCCCCGCTAtc                     >  2:631276/1‑150 (MQ=18)

                                                                                        tCATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGCGAGGCCTGACGGCCTTCCCGCTATTc                    >  2:645153/1‑151 (MQ=255)

                                                                                         cATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTTACGGCCTCCCCGCCATTCa                   >  2:1719022/1‑151 (MQ=255)

                                                                                         cATTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCa                   >  1:5762340/1‑151 (MQ=255)

                                                                                          aTTGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCAt                  <  1:200386/151‑1 (MQ=255)

                                                                                           ttGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCagc                 >  1:4689364/1‑149 (MQ=255)

                                                                                           ttGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATc                 <  1:1115920/151‑1 (MQ=255)

                                                                                            tGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCt                >  1:4512742/1‑151 (MQ=255)

                                                                                            tGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCt                <  1:7240121/151‑1 (MQ=255)

                                                                                            tGAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCt                >  2:2499311/1‑151 (MQ=255)

                                                                                             gAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTa               <  1:6957042/151‑1 (MQ=255)

                                                                                             gAATCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTa               <  1:5988598/151‑1 (MQ=255)

                                                                                              aaTCTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTag              >  1:6332631/1‑151 (MQ=255)

                                                                                              aaTCTCAAGGAGCCTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCAGTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTag              >  2:2210354/1‑151 (MQ=21)

                                                                                                 ctcAAGGAGTTTTTCGTTCCGCTGTCGCGGGAAGTGGGGCGCAGTATAAGGGGACTCGAGAGGGCGTCAGCCTTTAATTTCCATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCCATCCATCTAGAGc           >  2:3237798/1‑151 (MQ=255)

                                                                                                 ctcAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGc           <  2:1822593/151‑1 (MQ=255)

                                                                                                  tcAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTcccc                           <  1:6787566/134‑1 (MQ=255)

                                                                                                  tcAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTcccc                           >  2:6787566/1‑134 (MQ=255)

                                                                                                   cAAGGAGTTTTTCGTTCCTATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcac         >  2:2563270/1‑151 (MQ=255)

                                                                                                   cAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTCTAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAAGCCTGACCACCTCCCCGCGATCCATCTAGAGccc         >  2:5059866/1‑149 (MQ=21)

                                                                                                   cAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcac         <  1:2931043/151‑1 (MQ=255)

                                                                                                   cAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcac         >  1:2537408/1‑151 (MQ=255)

                                                                                                   cAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcac         >  1:6197768/1‑151 (MQ=255)

                                                                                                   cAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcac         <  1:6590585/151‑1 (MQ=255)

                                                                                                    aaGGAGTTTTTCGTTTCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcaca        >  2:380124/1‑151 (MQ=255)

                                                                                                    aaGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcaca        >  1:2561253/1‑151 (MQ=255)

                                                                                                    aaGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGcaca        <  1:6717415/151‑1 (MQ=255)

                                                                                                     aGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCacac       <  2:3189574/151‑1 (MQ=255)

                                                                                                     aGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCacac       >  2:7111884/1‑151 (MQ=255)

                                                                                                     aGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCacac       >  2:5038051/1‑151 (MQ=255)

                                                                                                      ggAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACAcc      >  2:6993754/1‑151 (MQ=255)

                                                                                                       gAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGAGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAATGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACACCa     >  2:6985300/1‑151 (MQ=255)

                                                                                                        aGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACACCAg    <  1:6449506/151‑1 (MQ=255)

                                                                                                         gTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACACCAGc   <  1:3415734/151‑1 (MQ=255)

                                                                                                         gTTTTTCGTTCAGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACACCAGc   <  2:148868/151‑1 (MQ=255)

                                                                                                          ttttTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACACCAGca  >  2:2499882/1‑151 (MQ=255)

CTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTTGATCGTAGCCCTTACAGC‑‑A‑‑CCTTCCG‑‑AATCGTCTAACTCATTGAATCTCAAGGAGTTTGTCGTTCCGTTGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAATAACCGTTGATAGCGCAGAAAAAACAAAGCGGGGAGGCCTGACGGCCTCCCCGCTATTCATCTAGAGCACACCAGCA  >  CP009974/1920691‑1920941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`