| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,984,399 | T→C | intergenic (+229/+55) | RPPX_08865 → / ← RPPX_08870 | hypothetical protein/SulP family inorganic anion transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,984,399 | 0 | T | C | 99.7% | 939.5 / NA | 282 | intergenic (+229/+55) | RPPX_08865/RPPX_08870 | hypothetical protein/SulP family inorganic anion transporter |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (147/134); total (148/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
TGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGA > CP009974/1984252‑1984546 | gcgggCCAAGCTCCACCCGCCGTTCACCGTGGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCa < 1:4683094/148‑1 (MQ=255) ctgGCCAATCTCCGCCCGCCGTGCACCGTTGCCGGCGCTACCGTAGTCGCGGTTAGACCCGCTCCTACACACACGCATCGGCGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAc < 1:4389362/151‑1 (MQ=14) ggCCAATCTCCCCCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTACACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAccc < 1:6669891/151‑1 (MQ=255) cactgtcCACCCGCCGTTCGCCGTGGCCGCCGCTACCGGATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACccgcc < 2:3819264/146‑1 (MQ=17) cAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTCGGAGCGGGTTTTCCCGCCAAAGGGCCGGCCCTGCTGGCCACTCTCCACccgcc > 2:3339574/1‑151 (MQ=255) cAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCCGTGGTTCGCCACAGCCCCTCGTAGGAGCGGGGTTACCCGCGCAAGGGCCGGCCCTGCTGGCCCCTCTCCACccgcc > 2:7092786/1‑151 (MQ=14) ccgccgTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGtt < 1:2595613/151‑1 (MQ=255) cgccgTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTg > 1:10994/1‑151 (MQ=255) cgcgTTCAGCGGTGCCGCCGCTACCGGACGCGCGGGTCAACCCGCGCCTGCACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgc < 2:5217879/149‑1 (MQ=14) cACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCAc > 1:4940016/1‑151 (MQ=255) gTTGCGGGCGCGACCGTCTGCGCGGGTCAACCCGCTCCGGCACACGCGCATCGGTGGTTCGCCGCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTAcc < 2:2539843/151‑1 (MQ=17) gTTGCCGGCGCTACCGTATTCGCGGGTAAACCCGCCCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTAcc < 2:1620042/151‑1 (MQ=255) gTTGCCGCCTCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTAcc < 1:3086926/151‑1 (MQ=255) gTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTAcc < 1:3324010/151‑1 (MQ=255) gTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTAcc > 2:711476/1‑151 (MQ=255) gccgccGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTa < 1:1715923/151‑1 (MQ=255) ccgccgCGATCGTCTGCGCGGGTAGAACCGCTTCTACAACGTCGCATCGGTGGTTCGCCACAGCGCGTCGTAGGAGCAGGTTTACCCGCGAGAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTAGCGTAt < 2:5932343/151‑1 (MQ=14) gccgcTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGAAGCGGGTCTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCCCTGCCGCCACCACCgcactc > 2:6177347/1‑146 (MQ=17) cgcTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTcgc > 1:856069/1‑151 (MQ=255) tACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCggg > 2:3423339/1‑151 (MQ=255) tACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCggg < 1:4236477/151‑1 (MQ=255) tATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAc > 1:3017073/1‑151 (MQ=255) tATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAc > 1:4817195/1‑151 (MQ=255) aTTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTGACCGTTGCCGCCACTACCGTATTCCCGGGCACAcc > 2:3993805/1‑151 (MQ=255) aTTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAcc > 1:6999533/1‑151 (MQ=255) gcgGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTCAAcccccc > 1:1797813/1‑148 (MQ=255) gcgGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGCTGCCGCCACTACCGTACTCGCGGGCACACCCagc > 2:6750758/1‑149 (MQ=17) cgGGTAAACACGCTCCTACACACACGCATCGGTGGTTCGCCACAGCACGTCGTAGGAGCGGGGATAGCCGCGAAAGGGCCGGCTCTGCTGGCCAAACGCCACCCGCCGTTCACCGCTGCCGACACTACCGTATTCGCCGGCAAactcactc > 2:4234501/1‑151 (MQ=255) gTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGCAAACCCACTCCTa > 2:1832804/1‑151 (MQ=255) tAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTAc > 1:1367124/1‑151 (MQ=255) aaaCCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACg > 1:974760/1‑151 (MQ=255) aCCCGCTCCGACACACGCGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCCGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGcc < 2:1326043/151‑1 (MQ=255) cccGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAAGCTCCACCCGCCGTTCACCGTTGCCGCCCCTACCGTATTCGCGGGCAAACCCACTCCTACGccc > 1:5371347/1‑151 (MQ=255) ccGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGcccc < 1:594532/151‑1 (MQ=255) cTCGTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTCAGCGCGGACTTACCCGCGAAAAGGCCGGTCCTGCCGGCCAATCTCCACCCGCCATTCACTGTGGCCGACACCACCGAAATCTCCTGAAAACACAAGTCTACGCCCCAAc > 2:1659222/1‑151 (MQ=255) tCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCCCCCCTACGCCCCAAcc > 2:4702103/1‑151 (MQ=255) ccTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAccc > 1:4612263/1‑151 (MQ=255) ccTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAccc > 2:2742731/1‑151 (MQ=255) gacacgcgcGCATGGGTGGTTCGCCCCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAccccc < 2:4136984/150‑1 (MQ=17) gcgcacacGCATCGGTGGTTCGCCGCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCg < 2:4812887/148‑1 (MQ=255) cacacacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGc > 2:773654/1‑151 (MQ=255) cacacGCATCGGTGGTTCGCCAGAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGccg > 2:6434689/1‑149 (MQ=255) cacacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTCAACCCACTCCTACGCCCCAACCCCCGccg > 2:3909480/1‑149 (MQ=255) cacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGGAAACCCACTCCTACGCCCCAACCCCCGCTGTa > 1:5707617/1‑151 (MQ=255) cGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTCGt > 1:90868/1‑151 (MQ=255) gCATCGGTGGTTCGCCGCGGCCCGTCGTAGGGGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTc < 2:2035727/151‑1 (MQ=255) aTCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCg > 1:4118028/1‑151 (MQ=255) ccGGTGGTTCGGCGCCGCCCGTGGTAGGGGCGGGTTTGCCCGCGAAGGGTCCGGCCCTGCTGGCGAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTGCGCCCCAACCCCCGCTGTAGTCCGc < 2:6934733/150‑1 (MQ=17) cGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCa < 2:2008209/151‑1 (MQ=255) tggtTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAAcc > 2:4429671/1‑151 (MQ=255) ggtTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTCGTCCGCAACCg > 2:5612408/1‑151 (MQ=255) gtTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGc > 1:1473288/1‑151 (MQ=255) gtTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGc > 2:1289159/1‑151 (MQ=255) ttCGCCACCGGCCGTCGTAGCAGCGGGTTCGCGCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGcc < 2:5014534/151‑1 (MQ=17) cggcgcaGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGcccc < 2:6324952/146‑1 (MQ=255) cGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGcccc > 1:580997/1‑151 (MQ=255) cacaGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCCTATTCGCGGGTAAACCCACTCCTACGCCCCCACCCCCGCCCTAGTCCGCAACCGCCCCTCg > 2:3669877/1‑151 (MQ=18) gcaGCCCGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGa < 2:6906538/150‑1 (MQ=255) acaGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCCCGa > 2:86732/1‑151 (MQ=255) caGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGAt < 2:536158/151‑1 (MQ=255) ccGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGa > 2:29556/1‑151 (MQ=255) ggtcgtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGAc < 2:2639638/150‑1 (MQ=255) gtcgtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACg > 1:2044641/1‑151 (MQ=255) gtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCtt > 1:2605061/1‑151 (MQ=255) aGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCa < 1:6364319/151‑1 (MQ=255) aGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCa < 1:6858027/151‑1 (MQ=255) aGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCa < 1:3870402/151‑1 (MQ=255) ggAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTGCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAg < 2:5140485/151‑1 (MQ=255) gAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAgg < 1:4066650/151‑1 (MQ=255) gAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAgg < 2:3389728/151‑1 (MQ=255) aGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGgc < 2:1113028/151‑1 (MQ=255) aGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACACCCCCACCCCCGCTGTAGTCCGCAACCCCCCCTCGATGCGACTCTTCAGgc > 1:2766740/1‑151 (MQ=17) tttACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgct < 1:6132175/151‑1 (MQ=255) ttACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctg < 1:3394702/151‑1 (MQ=255) aCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctgct < 1:45166/151‑1 (MQ=255) ccGCGAAAGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGctct < 1:1451976/151‑1 (MQ=255) ccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctgct < 1:6225270/149‑1 (MQ=255) cgcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGCCGCTTCAGGCGCCGCTGCTCTa > 2:5481021/1‑151 (MQ=255) cgcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTa < 1:3624588/151‑1 (MQ=255) gcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTAt > 2:3110697/1‑151 (MQ=255) gcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTAt < 1:382431/151‑1 (MQ=255) aGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCa < 1:6486692/151‑1 (MQ=255) ggtcctacccTGCTGGCCCTCCTCCCCCCATCGTGCGCCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTGCTACGCCCCAGCCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCaa < 2:1357331/144‑1 (MQ=25) gggCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCaa < 1:2486865/151‑1 (MQ=255) ggccggccCTGTTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCAAACCACCGCTGTAGTCAGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAc < 1:1436313/151‑1 (MQ=25) gccggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAcc < 1:3759901/151‑1 (MQ=255) gccggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAcc < 1:6012197/151‑1 (MQ=255) ccggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCg < 1:1296571/151‑1 (MQ=255) gggccCTGCTGGCCAATCCCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCACCCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGt < 2:1002422/150‑1 (MQ=255) ggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTg > 1:5983962/1‑151 (MQ=255) ggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTg < 1:7074838/151‑1 (MQ=255) gccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGa > 1:1537536/1‑151 (MQ=255) ccTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGccc > 2:1537721/1‑151 (MQ=255) tgcggGCCAATCTCCACCCGCCGGTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGAccaa < 1:7208436/151‑3 (MQ=255) tgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTg < 1:5316638/151‑1 (MQ=255) ccAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCa < 1:6802287/151‑1 (MQ=255) ccAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCa < 2:2388207/151‑1 (MQ=255) cAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGCGACCCATTGGCAg > 2:5993314/1‑151 (MQ=255) aaTCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTCTCAGCAACCGTGCCCCATTGGCAGa > 1:6560734/1‑151 (MQ=255) aaTCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGa > 1:5639847/1‑151 (MQ=255) | TGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGA > CP009974/1984252‑1984546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |