BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	3,793,987	2 bp→CC	coding (293‑294/3894 nt)	RPPX_16900 →	YD repeat‑/RHS repeat‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	3,793,987	0	T	C	100.0%	999.1 / NA	301	V98A (GTT→GCC)	RPPX_16900	YD repeat‑/RHS repeat‑containing protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (144/157); total (144/157)
*	CP009974	3,793,988	0	T	C	100.0%	1002.1 / NA	301	V98A (GTT→GCC)	RPPX_16900	YD repeat‑/RHS repeat‑containing protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (144/157); total (144/157)

Only 100 of 301 total aligned reads displayed.

GTGACGTTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGTTGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACGTCA  >  CP009974/3793842‑3794130

||

  gacgtTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGgcgcc                                                                                                                                          >  2:1892364/1‑150 (MQ=255)

  gacgtTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCt                                                                                                                                          >  2:2106278/1‑151 (MQ=255)

    cgtTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTac                                                                                                                                        >  2:7127302/1‑151 (MQ=255)

        gcgcTAGGGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCGGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTaccaac                                                                                                                                    <  2:5774401/151‑1 (MQ=21)

           cTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAg                                                                                                                                 <  1:326371/151‑1 (MQ=255)

            tataGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCACCCAGt                                                                                                                                >  2:6102276/1‑151 (MQ=255)

            tataGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGt                                                                                                                                <  2:1398798/151‑1 (MQ=255)

            tataGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGt                                                                                                                                >  2:5849141/1‑151 (MQ=255)

               aGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGa                                                                                                                             <  1:1231180/151‑1 (MQ=255)

                gCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGAc                                                                                                                            <  1:1392751/151‑1 (MQ=255)

                   cGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGAt                                                                                                                         <  2:17599/151‑1 (MQ=255)

                     cTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGt                                                                                                                       >  2:4110591/1‑151 (MQ=255)

                      tCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTc                                                                                                                      >  1:7056215/1‑151 (MQ=255)

                      tCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTc                                                                                                                      <  2:4682126/151‑1 (MQ=255)

                        aGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCgg                                                                                                                    >  1:836663/1‑151 (MQ=255)

                        aGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCgg                                                                                                                    >  2:35186/1‑151 (MQ=255)

                          ccTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGgag                                                                                                                  >  1:3952959/1‑151 (MQ=255)

                            ttGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGaa                                                                                                                <  1:1681789/151‑1 (MQ=255)

                             tGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGaaa                                                                                                               >  1:88799/1‑151 (MQ=255)

                                cGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTAAGAAAAAAAg                                                                                                            <  2:1067264/151‑1 (MQ=18)

                                 gACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGACAAAGa                                                                                                           >  2:5384374/1‑151 (MQ=255)

                                 gACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGa                                                                                                           >  1:6166764/1‑151 (MQ=255)

                                   cAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATc                                                                                                         >  2:3680976/1‑151 (MQ=255)

                                   cAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATc                                                                                                         <  1:2106278/151‑1 (MQ=255)

                                   cAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCAGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGACGGAGAAAAAGATc                                                                                                         <  2:1011908/151‑1 (MQ=255)

                                     ttGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGa                                                                                                       >  1:6051460/2‑151 (MQ=255)

                                     gTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGa                                                                                                       <  2:5306391/151‑1 (MQ=255)

                                      tGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGac                                                                                                      <  1:5283010/151‑1 (MQ=255)

                                         ttttGGTACAGGCTGGAACCTGCGCACCACCAAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTGCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACg                                                                                                   <  2:3422810/151‑1 (MQ=255)

                                             ggTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTcc                                                                                               >  1:2538464/1‑151 (MQ=255)

                                             ggTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTcc                                                                                               >  1:2318454/1‑151 (MQ=255)

                                               tACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCAc                                                                                             <  2:816307/151‑1 (MQ=255)

                                               tACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCAc                                                                                             >  2:4734127/1‑151 (MQ=255)

                                                   ggCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCttt                                                                                         <  1:5420462/151‑1 (MQ=255)

                                                   ggCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCttt                                                                                         <  1:4199191/151‑1 (MQ=255)

                                                      tGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATg                                                                                      >  2:759645/1‑151 (MQ=255)

                                                       ggAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCAc                                                                                             >  2:4033292/1‑143 (MQ=255)

                                                       ggAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGCTCCACCTTTCTGa                                                                                     >  2:2678049/1‑151 (MQ=255)

                                                        gAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCACTGGCGAAACGTGCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGGGAAAACGATCGACACGTTCCACCCGTATGAg                                                                                    >  2:3746663/1‑151 (MQ=14)

                                                        gAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAg                                                                                    <  1:5975543/151‑1 (MQ=255)

                                                                gcACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGa                                                                            >  2:3329071/1‑151 (MQ=255)

                                                                  accaccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAg                                                                          <  2:921153/151‑1 (MQ=255)

                                                                   ccaccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGa                                                                         >  2:702223/1‑151 (MQ=255)

                                                                   ccaccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGa                                                                         <  1:5125898/151‑1 (MQ=255)

                                                                    caccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGAc                                                                        >  2:1485909/1‑151 (MQ=255)

                                                                      ccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCg                                                                      <  1:4796037/151‑1 (MQ=255)

                                                                      ccGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCg                                                                      <  1:2592449/151‑1 (MQ=255)

                                                                       cGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGc                                                                     <  1:4853949/151‑1 (MQ=255)

                                                                        gAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCt                                                                    >  1:2776561/1‑151 (MQ=255)

                                                                         aaTTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTg                                                                   <  1:559133/151‑1 (MQ=255)

                                                                          aTTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTgg                                                                  <  1:65518/151‑1 (MQ=255)

                                                                           ttCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAACACCGCTGGc                                                                 >  2:4407177/1‑151 (MQ=255)

                                                                             cGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCgg                                                               >  2:2594391/1‑151 (MQ=255)

                                                                              gACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCggg                                                              >  2:6904775/1‑151 (MQ=255)

                                                                              gACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCggg                                                              >  2:676404/1‑151 (MQ=255)

                                                                                cccTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGggtg                                                            >  2:3226525/1‑151 (MQ=255)

                                                                                      ccAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAg                                                                                    >  2:4817924/1‑121 (MQ=255)

                                                                                       cAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCAcc                                                     <  1:5139606/151‑1 (MQ=255)

                                                                                       cAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCAcc                                                     <  1:6823755/151‑1 (MQ=255)

                                                                                        aGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCg                                                    >  2:1153310/1‑151 (MQ=255)

                                                                                         gAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGc                                                   <  1:6299492/151‑1 (MQ=255)

                                                                                             cgccgGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCg                                               <  1:4171592/151‑1 (MQ=255)

                                                                                              gccgGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGCAAAAGATCGCCACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCgg                                              >  1:339088/1‑151 (MQ=255)

                                                                                              gccgGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCgg                                              <  1:2704924/151‑1 (MQ=19)

                                                                                              gccgGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCgg                                              <  1:4521359/151‑1 (MQ=19)

                                                                                                cgGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCg                                            >  2:2421652/1‑151 (MQ=16)

                                                                                                    tCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCgtggt                                        >  1:4298415/1‑151 (MQ=255)

                                                                                                    tCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCgtggt                                        <  1:4685945/151‑1 (MQ=21)

                                                                                                     cATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCgtggtg                                       >  1:3317281/1‑151 (MQ=255)

                                                                                                     cATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCgtggtg                                       >  1:3110788/1‑151 (MQ=19)

                                                                                                        ttCCCTGGCCAATGGCGAAACGTTCACAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCGTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGaa                                    <  2:4228025/151‑1 (MQ=255)

                                                                                                        ttCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGaa                                    <  1:2984119/151‑1 (MQ=25)

                                                                                                         tCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGCTGCACCGCTCCGGCGTGGTCGAAg                                   >  2:6522139/1‑151 (MQ=255)

                                                                                                          cccTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGt                                  >  2:879977/1‑151 (MQ=18)

                                                                                                           ccTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTg                                 >  1:4972906/1‑151 (MQ=19)

                                                                                                           ccTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTg                                 <  2:4067219/151‑1 (MQ=25)

                                                                                                             tGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCt                               >  2:3025935/1‑151 (MQ=16)

                                                                                                             tGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCt                               >  2:5130933/1‑151 (MQ=255)

                                                                                                               gCCAATGGCGAAACGTTCAAAGCAGACGGCCGTGCCGGCGCTACCAAACAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTCTGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCg                             <  2:173592/151‑1 (MQ=11)

                                                                                                                 cAATGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAg                           <  1:69985/151‑1 (MQ=25)

                                                                                                                  aaTGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGc                          >  2:3075773/1‑151 (MQ=19)

                                                                                                                  aaTGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGc                          <  2:2336815/151‑1 (MQ=25)

                                                                                                                  aaTGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCCCCACCAACCAGTTGACGATGAAGGCGAAAAAGATCGACACGATCCACCTTTCTGAGGACGCTGAAGACACCTGGCCGAGCGAGCACCGCCCCGGCGTGGTGGCAGTGCACGAGc                          >  2:5578420/1‑151 (MQ=11)

                                                                                                                   agggCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCg                         <  2:7068441/149‑1 (MQ=255)

                                                                                                                   aTGGCGAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCg                         <  1:1788069/151‑1 (MQ=255)

                                                                                                                        gAAACGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAg                    <  2:5956063/151‑1 (MQ=21)

                                                                                                                           aCGTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGtt                 <  1:902480/151‑1 (MQ=255)

                                                                                                                             gTTCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCGTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTTGACGTGCTCGAGCGAAAAGGTTCg               >  1:3115706/1‑151 (MQ=255)

                                                                                                                               tCAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAg             >  2:4314940/1‑151 (MQ=255)

                                                                                                                                gaaaGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGc            <  2:3794825/150‑1 (MQ=255)

                                                                                                                                cAAAGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGc            <  2:2450744/151‑1 (MQ=255)

                                                                                                                                 aaaGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGcc           <  1:4634715/151‑1 (MQ=255)

                                                                                                                                  aaGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAACAAGATCGACACGTTCCACCTTGATGAGGACGCTGAAGACCGCTGGCGGGGGGTGCACCGCTCCGGCGCGGTGGAAGTGCTCGAGCGAAAAGGTGCGAGccc          >  2:5084195/1‑151 (MQ=11)

                                                                                                                                   aGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCg         <  1:5493984/151‑1 (MQ=255)

                                                                                                                                   aGCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCg         <  1:7180426/151‑1 (MQ=255)

                                                                                                                                    gCCGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGt        <  2:3572877/151‑1 (MQ=255)

                                                                                                                                      cGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTAc      <  1:2707233/151‑1 (MQ=255)

                                                                                                                                      cGACGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTAc      >  2:1610686/1‑151 (MQ=255)

                                                                                                                                        aCGGCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACGt    >  2:3161105/1‑151 (MQ=255)

                                                                                                                                          ggCCGTGCCGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACGTCa  >  1:3718651/1‑151 (MQ=255)

||

GTGACGTTGCGCTATAGCCCGCTCAGCCTTGCCGACAGTGGTTTTGGTACAGGCTGGAACCTGCGCACCACCGAATTCGACCCTGCCCAGAACCGCCGGATCATTTCCCTGGCCAATGGCGAAACGTTCAAAGCCGACGGCCGTGTTGGCGCTACCAACCAGTTGACGATGTCGGAGAAAAAGATCGACACGTTCCACCTTTATGAGGACGCTGAAGACCGCTGGCGGGTGGTGCACCGCTCCGGCGTGGTGGAAGTGCTCGAGCGAAAAGGTTCGAGCCCGTACGTCA  >  CP009974/3793842‑3794130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`