| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,915,170 | Δ1 bp | intergenic (+59/+9) | RPPX_08535 → / ← RPPX_08540 | ferrioxamine B receptor/5S ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,915,170 | 0 | C | . | 87.3% | 438.3 / 118.1 | 183 | intergenic (+59/+9) | RPPX_08535/RPPX_08540 | ferrioxamine B receptor/5S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (0/2); major base . (64/94); minor base G (10/13); total (74/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 183 total aligned reads displayed.
TACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGT > CP009974/1915033‑1915303 | tACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGa < 2:1961528/151‑1 (MQ=255) cTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGa > 1:3800264/1‑151 (MQ=255) tCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGAt < 1:419861/151‑1 (MQ=255) tgtgCCAGCCTGAACTACTGCTACATGAGTGAAGAGCGCAATGTAAGCGCTACAGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGAc < 2:707473/151‑1 (MQ=255) gCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTa < 2:3901909/151‑1 (MQ=255) ccAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAc < 1:1315934/151‑1 (MQ=255) ccAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACATAc < 1:3598419/151‑1 (MQ=255) cAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAct > 2:4732269/1‑151 (MQ=255) cAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAct < 2:1721010/151‑1 (MQ=255) gCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTActct < 1:3605087/151‑1 (MQ=255) ccTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACtctc > 2:3161540/1‑151 (MQ=255) tGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTcac > 1:3566073/1‑151 (MQ=255) aaCTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACAt < 1:2204421/151‑1 (MQ=255) actactGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATg < 2:5224970/151‑1 (MQ=255) actactGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATg < 2:2318922/151‑1 (MQ=255) tGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGaa < 1:1016973/151‑1 (MQ=38) tGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGaa < 1:1016248/151‑1 (MQ=38) gCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGaaa > 1:3263438/1‑151 (MQ=38) gCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGaaa > 2:1086315/1‑151 (MQ=38) gCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGaaa > 1:651584/1‑151 (MQ=38) gCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGaaa > 1:1672424/1‑151 (MQ=38) cATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAAcccc > 1:3411296/1‑151 (MQ=38) aTGGGGGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCca < 2:3688672/151‑1 (MQ=38) gTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACt < 1:3113271/151‑1 (MQ=38) gTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACt < 2:2549246/151‑1 (MQ=38) tGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTa > 1:5000688/1‑151 (MQ=38) gAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTAc > 1:2644760/1‑151 (MQ=38) agagCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCa < 1:1223660/151‑1 (MQ=37) agCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATc < 2:2117424/151‑1 (MQ=37) gcgcAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACCCTACCATCg > 1:3690589/1‑151 (MQ=37) gcgcAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCg < 2:1510085/151‑1 (MQ=37) cgcAATGTAAGCGCTAGGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAATCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCgg < 2:4202889/151‑1 (MQ=25) cAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCg > 2:5091803/1‑151 (MQ=37) aaTGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCCCACAGCGGCATTG‑GGTCTGAATCTTGACGATGACCTACTCTCCCATAGGGAAACCCACCACTACCATCGGCGa > 2:3526277/1‑151 (MQ=25) aaTGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGa < 1:2977129/151‑1 (MQ=37) aaTGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCACACATGGGGAACCCCCACACTACCATCGGCGa < 2:64592/151‑1 (MQ=25) aTGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATAGTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAt > 1:3436478/1‑151 (MQ=25) tGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATg < 2:4000684/151‑1 (MQ=25) tGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATg < 2:4635148/151‑1 (MQ=25) gTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGc < 1:4589033/151‑1 (MQ=25) gTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGc < 1:2155052/151‑1 (MQ=25) gTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGc < 1:548929/151‑1 (MQ=25) gTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGc > 2:1400466/1‑151 (MQ=25) gTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCGTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGc > 2:341622/1‑151 (MQ=25) gTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGATGTG‑GGTTTGAAGCTTGACGATGACCTACTCTCACATGGGGAAACCCCAAACTACCATCGGCGATGc > 1:532612/1‑151 (MQ=25) aaGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCAt < 1:3288124/151‑1 (MQ=25) aGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATc < 1:1209381/151‑1 (MQ=25) aGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATc < 1:2460037/151‑1 (MQ=25) gcgcTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGCAACCCCACACTACCATCGGCGATCCATCg > 1:5401234/1‑151 (MQ=25) gcTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGtt > 1:2349299/1‑151 (MQ=25) tACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTc > 1:2758211/1‑151 (MQ=25) ggTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCact > 1:2667094/1‑151 (MQ=25) tCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGAGTCaatac > 1:14760/1‑151 (MQ=21) cAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCactgct < 1:3376006/151‑1 (MQ=21) cgCTATCAGTTCTAACCGATATTGAGGCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCActgctg < 2:4661931/150‑1 (MQ=18) aGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCActgctg < 2:2160358/151‑1 (MQ=21) cTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAg < 1:2082809/151‑1 (MQ=21) tATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGt < 1:2685087/151‑1 (MQ=21) ctCAGTTCTAACCGATATTGAATCCCGTGAAAGACAACGCCCCTGTCCGTATCGCAGACGGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGtt < 2:532612/150‑1 (MQ=18) tCAGTTCTAACTGTTATTGAAGCCCTTGAAAGACAACGCCCCTGTCTGTAACGAAGTCGGGGGCTTTG‑GCTTTGAATCTTGACGATGGCCTACTCTCACCTGGGGAAACCCCACACTAACATCGGCGGTGCATCGTTTCACTACTGAGTTc < 2:4316598/151‑1 (MQ=12) cAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCg > 1:4939153/1‑151 (MQ=21) aGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgg < 2:377886/151‑1 (MQ=18) gTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCggg < 2:5274860/151‑1 (MQ=18) ttCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCggga < 1:1788530/151‑1 (MQ=18) cTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggatg > 1:776625/1‑151 (MQ=18) tAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggatgg < 2:3156541/151‑1 (MQ=18) tAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggatgg < 2:243181/151‑1 (MQ=18) aCCGAGATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggatggga < 2:5374502/151‑1 (MQ=18) gATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCa > 2:168864/1‑151 (MQ=18) gATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCa < 1:3953135/151‑1 (MQ=18) atTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAggt > 1:1549153/1‑151 (MQ=17) atTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAggt > 1:161537/1‑151 (MQ=17) atTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAggt > 1:4465164/1‑151 (MQ=17) ttGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAggtg < 2:4110702/151‑1 (MQ=17) gAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAggtggt < 1:4870486/151‑1 (MQ=17) cctgTGAAAGACAACGCCCCTGTCTGCATCGAAGAAAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCa < 2:2349299/148‑1 (MQ=14) cccGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCa < 1:3406273/151‑1 (MQ=17) gtaaaaGACAAACCCTCTCTCTGCATCGCAGACAGGGG‑CTTGGGGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATg < 2:2039831/148‑1 (MQ=11) gTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATg < 2:3147237/151‑1 (MQ=14) gAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGct < 1:4624538/151‑1 (MQ=14) aaaGACAAAGCGGCTGTCTGCATCGCAGACAGGGGGTTTG‑GGTTTGAATCTTGGCGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCCTCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGctc < 2:1314043/151‑1 (MQ=14) aaaGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGctc < 1:2359208/151‑1 (MQ=14) aaGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGctct > 2:4664570/1‑151 (MQ=14) gACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGATTTCGGTATGTGATCAGGTGGTTCCAATGCTCTAt > 2:2735921/1‑151 (MQ=14) aaaGCCACTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGgt < 2:866400/151‑1 (MQ=14) aaGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGgtc < 1:5202714/151‑1 (MQ=14) aaGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGgtc < 2:2491683/151‑1 (MQ=14) aGCCCCTGTGTGTATCGCAGACA‑GGGTCTTTCGATTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGgtcg < 2:3275413/151‑1 (MQ=14) cccTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCa < 1:669925/151‑1 (MQ=14) cccTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCa > 2:5308831/1‑151 (MQ=14) cTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAg > 1:2914500/1‑151 (MQ=11) gTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGaa < 1:3018975/151‑1 (MQ=11) cTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAAt > 2:1316820/1‑151 (MQ=11) cgCATCGCGGGCAGGGGCTTT‑CGATTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAAtt < 2:1222810/150‑1 (MQ=11) cATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCt < 1:471232/151‑1 (MQ=11) aTCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATTGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTg > 1:3227769/1‑151 (MQ=11) aTCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTg < 2:1041130/151‑1 (MQ=11) aTCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTg < 2:2713593/151‑1 (MQ=11) tCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGt < 1:3337618/151‑1 (MQ=11) cGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGgtc < 2:3263373/135‑1 (MQ=11) | TACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGT > CP009974/1915033‑1915303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |