Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 1,508,761 Δ2,603 bp RPPX_06690RPPX_06695 RPPX_06690, RPPX_06695

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 1508761–1511359 1511363 5–2603 350 [2] [0] 346 RPPX_06690–RPPX_06695 RPPX_06690,RPPX_06695

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 15087602 (0.010)336 (1.300) 191/284 0.0 99.7% intergenic (+932/‑204) RPPX_06680/RPPX_06690 membrane protein/integrase
?CP009974 1511364 = 0 (0.000)intergenic (+113/‑364) RPPX_06695/RPPX_06700 ATPase AAA/HxlR family transcriptional regulator

Only 100 of 365 total aligned reads displayed.

ACACCACTGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/1508603‑1508760
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCACCCCCAA  >  CP009974/1511364‑1511513
                                                                                                                                                                                                                                                                                                                    
ACACCACTGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAA                                                                                                                                                               >  1:3177177/1‑151
ACACCACTGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAA                                                                                                                                                               >  1:882096/1‑151
 cgCCACGGGTGACGGTGCCTGCGGCCGGCCCTTGCGGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAGCCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAAC                                                                                                                                                              <  2:5030113/149‑1
  ACCACTGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACG                                                                                                                                                             <  1:4827790/151‑1
    CACTGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCC                                                                                                                                                           <  1:5350216/151‑1
      CTGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGA                                                                                                                                                         <  1:1749282/151‑1
        GGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACC                                                                                                                                                       >  1:1551881/1‑151
           GACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGC                                                                                                                                                    >  1:5392246/1‑151
           GACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCAATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGC                                                                                                                                                    <  2:2123696/151‑1
               GTGCCTCCCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAA                                                                                                                                                <  2:2408043/151‑1
               GTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAA                                                                                                                                                <  1:3812612/151‑1
               GTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAA                                                                                                                                                <  1:4486532/151‑1
                TGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAG                                                                                                                                               <  1:4915825/151‑1
                 GCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGC                                                                                                                                              <  1:1608706/151‑1
                 GCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGC                                                                                                                                              <  1:668826/151‑1
                  CCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGTCTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCG                                                                                                                                             <  2:3207050/151‑1
                  CCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCG                                                                                                                                             >  1:4022410/1‑151
                   CTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGC                                                                                                                                            >  1:2266764/1‑151
                       CGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCc                                                                                                                                        >  2:3584427/1‑150
                       CGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCG                                                                                                                                        >  1:811091/1‑151
                         CCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAA                                                                                                                                      >  2:1091022/1‑151
                           TGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACA                                                                                                                                    >  1:4970232/1‑151
                             CCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGC                                                                                                                                  >  1:5265741/1‑151
                              CCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCA                                                                                                                                 <  1:5241014/151‑1
                                    TGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGC                                                                                                                           >  1:2427420/1‑151
                                    TGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGC                                                                                                                           >  1:3591256/1‑151
                                      GCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCA                                                                                                                         <  1:3403602/151‑1
                                      GCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCA                                                                                                                         <  2:1364531/151‑1
                                      GCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCA                                                                                                                         >  2:4708795/1‑151
                                             GAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACA                                                                                                                  >  1:2693433/1‑151
                                              AGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAG                                                                                                                 >  2:2346189/1‑151
                                              AGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAG                                                                                                                 >  1:574883/1‑151
                                              AGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAG                                                                                                                 >  1:19248/1‑151
                                              AGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAG                                                                                                                 >  1:2172292/1‑151
                                                    GGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTT                                                                                                           >  1:3552945/1‑151
                                                    GGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGC                                                                                                                                              <  1:2060495/116‑1
                                                    GGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGC                                                                                                                                              >  2:2060495/1‑116
                                                      CTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTAC                                                                                                         <  2:5131865/151‑1
                                                       TCGCCGCGTGAGCCACCATCCCCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACG                                                                                                        <  2:2496461/151‑1
                                                         GCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGT                                                                                                      <  2:2172292/151‑1
                                                           CGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCG                                                                                                    >  2:3638317/1‑151
                                                             CATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGAC                                                                                                  >  2:674537/1‑151
                                                               TGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCA                                                                                                >  2:724282/1‑151
                                                                 AGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAG                                                                                              <  1:1165901/151‑1
                                                                  GCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGT                                                                                             <  1:4407702/151‑1
                                                                   CCACCATCCCCTGCGCCATGACTGCCAGCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTC                                                                                            <  2:3305943/151‑1
                                                                   CCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGCACAGCGACCGGCCAAGCAACAGACGTTTCCCGCAGCCCAAGTC                                                                                            >  2:4265095/1‑151
                                                                   CCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTC                                                                                            <  1:2389341/151‑1
                                                                    CACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCC                                                                                           >  2:3039399/1‑151
                                                                        ATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGA                                                                                       <  2:2693433/151‑1
                                                                        ATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGGCGACCAAGTCCCCGc                                                                                       >  2:4279437/1‑150
                                                                             CTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGC                                                                                  <  2:882096/151‑1
                                                                              TGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCA                                                                                 >  1:2901748/1‑151
                                                                                CACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACA                                                                               <  1:1852962/151‑1
                                                                                 ACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAA                                                                              >  2:4582553/1‑151
                                                                                  CCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAAC                                                                                                                               >  2:222380/1‑101
                                                                                    ATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCc                                                                           >  2:3950061/1‑150
                                                                                    ATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCA                                                                           >  1:1414524/1‑151
                                                                                       ACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTA                                                                        <  2:4941707/151‑1
                                                                                       ACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTA                                                                        <  1:4895432/151‑1
                                                                                        CTGCCATCACCCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAG                                                                       <  1:3490511/151‑1
                                                                                        CTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAG                                                                       <  1:4158793/151‑1
                                                                                          GCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCA                                                                     <  2:379666/151‑1
                                                                                          GCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCA                                                                     >  2:2454369/1‑151
                                                                                             ATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCCACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGCAGCAACC                                                                  >  2:5232714/1‑151
                                                                                              TCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCC                                                                 <  1:3697348/151‑1
                                                                                               CAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCGTGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCC                                                                <  2:604267/151‑1
                                                                                                 agCCTGGGATCGCCTTAGGCAGCAGGAATCTGGCCCAGTCCGGCGCCATGCCCACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCCACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAGTCCGTAGCAACCCCAG                                                              <  2:1030267/149‑1
                                                                                                 ACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAG                                                              >  2:1739336/1‑151
                                                                                                  CCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGG                                                             >  1:2314732/1‑151
                                                                                                  CCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGG                                                             <  1:1207899/151‑1
                                                                                                     TGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCG                                                          >  2:1008619/1‑151
                                                                                                           CGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCC                                                    <  2:3451364/151‑1
                                                                                                                GAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTG                                               >  2:1146519/1‑151
                                                                                                                 AGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGG                                              <  1:1451961/151‑1
                                                                                                                   CCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGT                                            >  2:4355968/1‑151
                                                                                                                    CAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTC                                           >  1:1111002/1‑151
                                                                                                                    CAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTC                                           >  1:3629050/1‑151
                                                                                                                      GCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGC                                         >  2:1282827/1‑151
                                                                                                                       CAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCG                                        <  2:1414524/151‑1
                                                                                                                       CAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGACACCGAGCGGCACAAACAGTAGCAACACCAGGGCGTAGCCCGCATGGGTCGCG                                        >  2:560624/1‑151
                                                                                                                        AGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGC                                       >  2:4596049/1‑151
                                                                                                                          CAATATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCG                                     <  1:4940386/151‑1
                                                                                                                             TATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACT                                  >  2:1915210/1‑151
                                                                                                                              ATTGCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTA                                 >  2:1590803/1‑151
                                                                                                                                 GCCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCC                              >  2:4972887/1‑151
                                                                                                                                  CCCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCA                             <  2:1962203/151‑1
                                                                                                                                   CCAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAG                            <  1:2793202/151‑1
                                                                                                                                   CCAGTGCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAG                            <  2:2610988/151‑1
                                                                                                                                    CAGTTCGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGC                           >  1:3253974/1‑151
                                                                                                                                         CGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCTGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATC                      <  2:5091209/151‑1
                                                                                                                                         CGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATC                      <  1:2775442/151‑1
                                                                                                                                         CGGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATC                      <  1:296960/151‑1
                                                                                                                                          GGCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCT                     <  2:4047395/151‑1
                                                                                                                                           GCGCCATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTG                    <  1:1008619/151‑1
                                                                                                                                               CATGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGC                <  2:5344058/151‑1
                                                                                                                                                 TGCCAACGCCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTG              <  1:74311/151‑1
                                                                                                                                                         CCGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCACCC      <  1:2496232/151‑1
                                                                                                                                                          CGACCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCACCCC     <  2:2782211/151‑1
                                                                                                                                                             CCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCACCCCCAA  <  1:2630530/151‑1
                                                                                                                                                                                                                                                                                                                    
ACACCACTGGTGACAGTGCCTACCGCCTGCCCTTGCTGGCCAGGTGAGGCCAGGCTCGCCGCATGAGCCACCATCACCTGCACCATGACTGCCATCAACCCTGTGATCGCCAGAGCCAGCAGCAATATTGCCCAGTTCGGCGCCATGCCAACGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/1508603‑1508760
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccgacCAGCGCAAGCGCCGCGAACAGCAACTGGCCAAGCAACAGACGTTTACGGTCGACCAAGTCCCCGAGCGGCACAATCAGTAGCAACCCCAGGGCGTAGCCCGCCTGGGTCGCGCCGACTACCCAGCCAATCTGCTGCTGCGCCACCCCCAA  >  CP009974/1511364‑1511513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.