| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 4425764 | 2 (0.010) | 229 (0.880) | 152/288 | 0.5 | 99.6% | intergenic (+687/‑204) | RPPX_19805/RPPX_19815 | hypothetical protein/integrase |
| ? | CP009974 | 4428367 = | 0 (0.000) | intergenic (+112/+608) | RPPX_19820/RPPX_19830 | ATPase AAA/ligand‑gated channel protein | |||||
Only 100 of 240 total aligned reads displayed.
AAGGTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/4425614‑4425914 | gtgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATGAATGCGGGGGcgt > 1:5231788‑M1/1‑148 (MQ=255) gtgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgt > 1:661240‑M1/1‑148 (MQ=255) gtgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgt > 2:775321‑M1/1‑148 (MQ=255) tgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgtt > 1:4398016‑M1/1‑147 (MQ=255) tgtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgtt > 2:1479579‑M1/1‑147 (MQ=255) gtTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGGAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttg < 2:4684870‑M1/151‑6 (MQ=255) ttCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttgg < 2:602662‑M1/151‑7 (MQ=255) ccaGCCTGGTTCAGGCCAGTGGCCATTCGGGGGAAGCGGTTTGGGCGCGGCTGGGGCCCGAGCCTTCGGGGCAGCCGGTCACCTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCCATGCGGGGGcgctggt < 2:2927236‑M1/150‑8 (MQ=255) cAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtg > 1:3017337‑M1/1‑143 (MQ=255) aGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtga < 1:5219544‑M1/151‑10 (MQ=255) cTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATGTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatct < 2:3933802‑M1/151‑13 (MQ=255) tGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctg < 1:326738‑M1/151‑14 (MQ=255) gTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcg < 1:2537460‑M1/151‑16 (MQ=255) ttCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcga < 1:1774812‑M1/151‑17 (MQ=255) cAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgata > 1:2014507‑M1/1‑133 (MQ=255) aGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatat > 2:3103623‑M1/1‑132 (MQ=255) aGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatat < 2:3734501‑M1/151‑20 (MQ=255) ggccattggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatc < 1:2632738‑M1/151‑21 (MQ=255) ggccattggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatc > 1:3724123‑M1/1‑131 (MQ=255) cattggccagtCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTGCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaat < 2:4066929‑M1/151‑24 (MQ=255) tttggccatgcGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatc < 2:548293‑M1/150‑25 (MQ=255) ttggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatca < 1:3112377‑M1/151‑26 (MQ=255) tggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcag > 1:5182598‑M1/1‑125 (MQ=255) tggccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcag < 1:396750‑M1/151‑27 (MQ=255) ccattCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcg > 1:5112518‑M1/1‑122 (MQ=255) gggggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttc < 1:4333575‑M1/151‑36 (MQ=255) gggAAGCCATGTGGGAGCGGCTAGGGCATGAGCCTTCGGGGCAGCCGTTCAACTGGTTGGTGCGGCGGGAGTGCGAGCGCGGGCGGCAGGGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgc < 2:1365546‑M1/151‑38 (MQ=255) ggAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcg > 1:736116‑M1/1‑113 (MQ=255) gAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcgg < 1:2801421‑M1/151‑40 (MQ=255) gCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggccc < 1:4598782‑M1/151‑43 (MQ=255) ccATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccc < 2:4849957‑M1/151‑44 (MQ=255) ccATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccc < 1:1552577‑M1/151‑44 (MQ=255) aTTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggccccca < 2:2451788‑M1/151‑46 (MQ=255) ttGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacg > 1:1850207‑M1/1‑104 (MQ=255) ttGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacg > 1:2479317‑M1/1‑104 (MQ=255) gggAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgtt > 1:1512230‑M1/1‑102 (MQ=255) ggAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttg > 1:5170111‑M1/1‑101 (MQ=255) gAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgt > 2:4134916‑M1/1‑100 (MQ=255) gAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgt < 1:3658042‑M1/151‑52 (MQ=255) ggCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGCGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgctggtgatctgcgacatcaatcagtcgcgctccgcggcccccacgtcgtcccc > 2:3228503‑M1/1‑96 (MQ=255) ggCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgat > 1:383322‑M1/1‑96 (MQ=255) gCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatg < 2:743009‑M1/151‑57 (MQ=255) ggggCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgc < 2:475913‑M1/151‑60 (MQ=255) ggCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcga > 1:2269420‑M1/1‑90 (MQ=255) gCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgat < 1:4178939‑M1/151‑63 (MQ=255) cATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGCTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgatt > 2:2694793‑M1/1‑88 (MQ=255) aTGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattt > 1:1266237‑M1/1‑87 (MQ=255) tGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgt < 2:5281180‑M1/137‑52 (MQ=255) gAGCGTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttg < 1:4814292‑M1/151‑67 (MQ=255) aGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgt > 2:1702330‑M1/1‑84 (MQ=255) gCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtc > 1:1087760‑M1/1‑83 (MQ=255) gCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtc < 2:3670‑M1/151‑69 (MQ=255) tCGGGGCAGCCGTTCATCTCGTGGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCGATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcggtgcgcgattttgtccggc < 2:4567162‑M1/151‑73 (MQ=255) tCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggc < 2:4974076‑M1/151‑73 (MQ=255) cGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcg > 2:1117275‑M1/1‑78 (MQ=255) ggggCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcgg > 1:995213‑M1/1‑77 (MQ=255) gggCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgagtttgtacggcggc > 2:3387485‑M1/1‑76 (MQ=255) aGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttc < 1:3397509‑M1/151‑80 (MQ=255) aGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttc < 1:2151522‑M1/151‑80 (MQ=255) tCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcagttaa > 2:250475‑M1/1‑66 (MQ=255) gTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccac > 1:857733‑M1/1‑59 (MQ=255) gTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccac > 1:34376‑M1/1‑59 (MQ=255) ggTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatc < 2:3921624‑M1/151‑96 (MQ=255) cTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatca < 1:3370340‑M1/151‑103 (MQ=255) tGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaa < 2:4834676‑M1/151‑104 (MQ=255) tGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaa > 1:3937053‑M1/1‑48 (MQ=255) aGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatac > 1:5331738‑M1/1‑45 (MQ=255) cGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgg < 2:1790807‑M1/151‑111 (MQ=255) gAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccccatctcgatcaatacccggg > 1:4463483‑M1/1‑40 (MQ=255) gAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccggg > 1:1383423‑M1/1‑40 (MQ=255) gcgggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgc > 1:4635381‑M1/1‑36 (MQ=255) cgggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgct > 2:663711‑M1/1‑35 (MQ=255) cgggcggCCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgct > 1:310770‑M1/1‑35 (MQ=255) ggcgtcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctga > 2:4472163‑M1/1‑33 (MQ=255) ggcggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctga < 1:1901658‑M1/151‑119 (MQ=255) ggcggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctga > 1:3540843‑M1/1‑33 (MQ=255) cggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgctt < 2:1210134‑M1/151‑121 (MQ=255) cggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgatt > 1:4787087‑M1/1‑31 (MQ=255) cggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgatt < 1:427393‑M1/151‑121 (MQ=255) ggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattc < 2:5123184‑M1/151‑122 (MQ=255) ggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattc < 1:1464568‑M1/151‑122 (MQ=255) ggcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattc > 2:3139121‑M1/1‑30 (MQ=255) gcCGCGTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcagccccctcatctcgatcaatacccgggcggctgcctcg > 2:4248143‑M1/1‑29 (MQ=255) cgcgTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggccttcaggcaacccccacctctcgatcacgacccgggtcgctcatccggc > 2:2326475‑M1/1‑27 (MQ=255) gcgTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaa > 2:2115762‑M1/1‑26 (MQ=255) cgTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggcat > 2:3544020‑M1/1‑25 (MQ=255) gTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaata > 2:3283798‑M1/1‑24 (MQ=255) gTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaata > 2:5030775‑M1/1‑24 (MQ=255) gTAATCCATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaata > 1:3923318‑M1/1‑24 (MQ=255) cATTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagtt < 1:1251624‑M1/151‑134 (MQ=255) aTTCATCAATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatccgttc > 2:5011020‑M1/1‑17 (MQ=255) tcatcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccg < 2:2214763‑M1/151‑137 (MQ=255) catcaATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgc < 2:2768692‑M1/151‑138 (MQ=255) caATGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcg < 2:3508301‑M1/151‑141 (MQ=255) gatGCGCGGGcgttggtgatctgcgatatcgatcagccgcgcgtcgcggcccccacgttggcgatgcgggaggttgtccggcggctgtcaggcaacccccacatctcgatcaatgcccgggtcgctgattcggaatatcagttccgcgcgc < 2:4719362‑M1/150‑142 (MQ=255) aaTGCGGGGGcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgc > 2:1039135‑M1/1‑10 (MQ=255) tgcagggTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGAt < 1:5039918/147‑1 (MQ=14) gggggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaac > 1:491329‑M1/1‑5 (MQ=255) ggcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaacgct < 1:2697764‑M1/151‑150 (MQ=255) gcgttggtgatctgcgatatcaatcagtcgcgcttcgcggcccccacgttgtcgatgcgcgattttgtccggcggctttcaggcaacccccacatctcgatcaatacccgggtcgctgattcggaatatcagttccgcgcgcgcaacgctg < 1:2591566‑M1/151‑151 (MQ=255) | AAGGTGTTCAGCCTGGTTCAGGCCATTGGCCATTCGGGGGAAGCCATTTGGGAGCGGCTGGGGCATGAGCCTTCGGGGCAGCCGTTCAACTCGTTGGTGCAGCTGGAGTTCGAGCGCGGGCGGCCGCGTAATCCATTCATCAATGCGGGGGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC > CP009974/4425614‑4425914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |