| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | 418657 = | 0 (0.000) | 140 (0.720) +AAGAAGC |
92/214 | 1.9 | 97.7% | intergenic (‑236/+415) | RPPX_01715/RPPX_01720 | hypothetical protein/lipoprotein |
| ? | CP009974 | = 4147133 | 7 (0.030) | intergenic (+385/‑636) | RPPX_18425/RPPX_18430 | enoyl‑CoA hydratase/conjugal transfer protein TraR | |||||
Only 100 of 178 total aligned reads displayed.
AGCGGAGCGTAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAAC > CP009974/4146983‑4147275 | agcgcagcgcAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTc < 1:4385232/151‑1 (MQ=255) cgcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTc < 2:4419028/141‑1 (MQ=37) gcaggGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttg > 1:3921107‑M2/3‑143 (MQ=255) gcaggGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttg > 2:4242997‑M2/3‑143 (MQ=255) ggggCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgctt > 1:480955‑M2/1‑140 (MQ=255) gggCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttc > 2:2649818‑M2/1‑139 (MQ=255) gCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttctt > 1:716156‑M2/1‑137 (MQ=255) gCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttctt > 2:812000‑M2/1‑137 (MQ=255) ccGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttg > 2:4784243‑M2/1‑136 (MQ=255) ggATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTAGCCATAAGGGCGAAAACGTGATTCAGCGTCGCCATCCCACATGGGCTGTTCACTGCTACAAAACAGACGCCTTG‑‑‑‑‑‑‑gctgcgtgcttgttggt > 1:3705064/1‑149 (MQ=11) tgatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttct > 1:2228223‑M2/1‑131 (MQ=255) tgatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttct > 1:4831223‑M2/1‑131 (MQ=255) gtgcagAGTTTAGTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTAACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttgttgcttctt > 2:4538937‑M2/3‑123 (MQ=255) gcgcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttctt > 1:1800902‑M2/1‑123 (MQ=255) gcgcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttctt > 1:3237652‑M2/1‑123 (MQ=255) gcAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgc < 1:3663940‑M2/151‑31 (MQ=255) aGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgctt > 1:3498412‑M2/1‑119 (MQ=255) cGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttct > 2:1355558‑M2/1‑117 (MQ=255) gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttctt > 1:4952087‑M2/1‑116 (MQ=255) tttttGGTTACTTTTTTTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCGCCGTCGCCCTCGCGATTGGACTGTTCTCTGTTTCAAAACAGTCGAATTTgtttcttgcttcttgcttcttgcttcttgtttcttgc < 2:1862021‑M2/151‑38 (MQ=255) tttttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCACCGTAAGGGCGACAAGGTGACTCGGCCCCGCCAACCCGACTGGACTGTCCGCTGAACCAAAACAGACGCACTT‑‑‑‑‑‑‑gcttcttgcttcttgcttcttcctttttgcttctgtc > 1:2386085/1‑148 (MQ=2) ttACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAATGGCGAAAAGTTGTGCCTGCGTCGCCGTTGCAATTTGTCTTTTCCCTGAGCCAAAACACACCAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTTCTTCCTGCTTCTTCCATTTggg > 2:645074/1‑151 (MQ=11) ttACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttgg > 1:525233‑M2/1‑107 (MQ=255) ttttGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtg > 2:5349182‑M2/1‑102 (MQ=255) ttttGTCGCATTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtg > 2:4949417‑M2/1‑102 (MQ=255) tttGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgg < 1:1126020‑M2/151‑51 (MQ=255) ttGTGGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtggg > 2:3542723‑M2/1‑100 (MQ=255) ttGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtggg > 2:750342‑M2/1‑100 (MQ=255) tGTCTCGTCTGCCAAAAAGTGACTCGCTGCAACGCTGAAAAGGTGAGTCAGCGTCGCCATCGCAACTGGAATGTTGACTGAGCCAAAACAGCCGGGTTCgcttcttgcttcttgcctcttgcttcttgcttcttgcttcttggatgtgggc > 2:957658‑M2/1‑99 (MQ=255) tCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcat < 1:4929275‑M2/151‑55 (MQ=255) tCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgt < 2:1921553‑M2/145‑49 (MQ=255) tCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgt > 1:1921553‑M2/1‑97 (MQ=255) cgcgTTTGACAAAAAGTGACCCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcatt < 2:2201088‑M2/151‑56 (MQ=255) ttGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacat > 2:1451464‑M2/1‑91 (MQ=255) aCAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcga > 2:274615‑M2/1‑88 (MQ=255) aCAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcga > 2:2139162‑M2/1‑88 (MQ=255) aCAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcga > 1:5185126‑M2/1‑88 (MQ=255) cAAGAAGTGACTCGGCGTGAGGGCGAAAAGGTGAGTCGGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACGGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgag > 1:4844526‑M2/1‑87 (MQ=255) cAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgag < 2:3591686‑M2/151‑65 (MQ=255) aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTTAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagta < 1:5366757‑M2/151‑67 (MQ=255) aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagta < 1:4466278‑M2/151‑67 (MQ=255) aaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagta > 1:2484778‑M2/1‑85 (MQ=255) aaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtagg < 2:4030516‑M2/151‑69 (MQ=255) gTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggta > 2:1126020‑M2/1‑81 (MQ=255) tggcTCGCCGTAAGGGCGAAAAGGAGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTat < 1:865426/148‑1 (MQ=11) tGACTCGCCGTAAGGGCGAAAAGGTGATTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtatgtat < 2:3511953‑M2/151‑72 (MQ=255) tGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtat < 1:4233271‑M2/151‑72 (MQ=255) cctCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattc > 1:2850636‑M2/2‑78 (MQ=255) aCTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattc > 1:4641766‑M2/1‑78 (MQ=255) cTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattca > 2:918736‑M2/1‑77 (MQ=255) cGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcatt > 2:4473614‑M2/1‑75 (MQ=255) cGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCAAAAACAGACGAGATCgcttcttgcttcttgcatcttgcttattgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcatt < 2:1670835‑M2/151‑77 (MQ=255) gCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattc > 2:4580552‑M2/1‑74 (MQ=255) ccGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcg < 1:1729937‑M2/151‑79 (MQ=255) tAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgc < 2:1171050‑M2/151‑82 (MQ=255) gggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcagg < 2:486444‑M2/151‑85 (MQ=255) gggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcagg > 1:3765919‑M2/1‑67 (MQ=255) ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcgcatcgagtaggtattcattcgcgcaggt < 1:1825643‑M2/151‑86 (MQ=255) ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggt < 2:4895967‑M2/151‑86 (MQ=255) ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggt > 1:4240393‑M2/1‑66 (MQ=255) ggCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggt > 1:3988952‑M2/1‑66 (MQ=255) aaaaGGTGAGTCAGCGTCGCCATCTCAAATGGACTGTTCACTGAGCCAAAACATACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatttgggctttttctttgtgtatgtattcattcgcgcaggtggcg < 2:1077584‑M2/151‑90 (MQ=255) aaGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgca > 1:3077343‑M2/1‑60 (MQ=255) aGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcat < 1:5042847‑M2/151‑93 (MQ=255) gAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtc > 2:3621152‑M2/1‑55 (MQ=255) aGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtca < 2:4125278‑M2/151‑98 (MQ=255) aGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtca > 1:2254400‑M2/1‑54 (MQ=255) gTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcac < 2:4120247‑M2/151‑99 (MQ=255) gTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtcgcgcatagtcac < 2:4119797‑M2/151‑99 (MQ=255) tCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacc < 1:1237446‑M2/151‑100 (MQ=255) ggggtcgCCGTCGCACATGGACTGTTCACTGGGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctt > 2:3718673‑M2/4‑50 (MQ=255) aGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctt > 2:5063834‑M2/1‑50 (MQ=255) aGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcgtcttggatgtgggcattcacatcgagtcggtattcattcgcgcaggtggcgcatagtcagctt < 1:4088565‑M2/151‑102 (MQ=255) gCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcaccttt > 1:1884390‑M2/1‑49 (MQ=255) cGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttc > 1:368623‑M2/1‑48 (MQ=255) gTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttcc > 2:4622381‑M2/1‑47 (MQ=255) cGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgc > 2:3663940‑M2/1‑45 (MQ=255) gCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcc > 2:4929275‑M2/1‑44 (MQ=255) gCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcaccttt > 1:4466106‑M2/1‑44 (MQ=255) ccATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgccc > 1:2303308‑M2/1‑43 (MQ=255) cGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttac > 1:207288‑M2/1‑39 (MQ=255) gCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacg > 2:2490537‑M2/1‑38 (MQ=255) gCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacg > 2:2162485‑M2/1‑38 (MQ=255) gCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcatccacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacg < 2:117794‑M2/151‑114 (MQ=255) cAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacgg < 2:2067837‑M2/151‑115 (MQ=255) aaTGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgtttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcaccttttcacccttacggcg < 1:2597825‑M2/151‑117 (MQ=255) aaTGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcg < 1:1387948‑M2/151‑117 (MQ=255) aaTGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcg < 1:2158351‑M2/151‑117 (MQ=255) aaTGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgc < 1:4319890‑M2/114‑80 (MQ=255) aaTGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgc > 2:4319890‑M2/1‑35 (MQ=255) tGGACTGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcggg < 1:2220226‑M2/151‑119 (MQ=255) tGTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcact < 1:4911065‑M2/151‑124 (MQ=255) gTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcactt > 1:3604394‑M2/1‑27 (MQ=255) gTTCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcactt > 1:3604491‑M2/1‑27 (MQ=255) ttCACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcacttt > 1:4297568‑M2/1‑26 (MQ=255) cACTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcacttttt < 2:2095409‑M2/151‑128 (MQ=255) aCTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcactttttg < 1:2983682‑M2/151‑129 (MQ=255) aCTGAGCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcactttttg > 1:752112‑M2/1‑23 (MQ=255) gCCAAAACAGACGAGTTCgcttcttgcttcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgagtaggtattcattcgcgcaggtggcgcatagtcacctttccgcccttacggcgggtcactttttgtcaaa < 2:3126918‑M2/151‑134 (MQ=255) gccGAGTGC‑‑‑‑‑‑‑GCTGCTTGATTGTTGGGTCTTGCGTCTTGGTTGTGGGAAGGGGGCAGTCGGAGCGAGGAGGTATTGGGTCACGGAGGTGGGGCGGGGTCACGGTTCCGCCGTTATTGAGGGTCACTTTTTGTCAAACGCGACAAAAAGTAAc < 2:1288284/149‑1 (MQ=2) | AGCGGAGCGTAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAATGGACTGTTCACTGAGCCAAAACAGACGAGTTC‑‑‑‑‑‑‑GCTTCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAAGTGGCGCATAGTCACCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAAC > CP009974/4146983‑4147275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |