| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | 2596 = | 1 (0.000) | 213 (0.830) | 143/284 | 0.8 | 99.8% | intergenic (‑203/+211) | RPPX_00010/RPPX_00015 | integrase/peptidase S24 |
| ? | CP009974 | = 5798526 | 0 (0.000) | intergenic (‑14/–) | RPPX_25885/– | integrase/– | |||||
Only 100 of 231 total aligned reads displayed.
CTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAACACTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009974/5798377‑5798534 | cTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAa < 1:4423665‑M2/151‑2 (MQ=255) aCTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacac > 2:4273974‑M2/1‑147 (MQ=255) cTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacact > 1:2867268‑M2/1‑146 (MQ=255) tCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAACCAGCAACGGAAAGCCTTCACAGGATCGACCTGCTAATGCTAGCTCTTTTGTTGCGAATACCAGCCCCATGCCGCTGCCCCACCACACtc > 2:5049643/1‑150 (MQ=255) gATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttcc > 1:2436398‑M2/1‑143 (MQ=255) aTAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttcca < 1:3715970‑M2/151‑10 (MQ=255) aTAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttcca < 1:4220511‑M2/151‑10 (MQ=255) ggCGGGTGCCGAAGGAAGGGTGGAGCTGGCGCGACTGGCCAGCCCTCTGACCGGATCGGCAGCGGAAAGCCGTCAAAGGATCGACCTGCTAATGCTAGGTCGTATGTTGCGAATACCAGCCGCATGCCGCTGCCCTAAAACACTGccaatg < 2:1731464/150‑5 (MQ=255) aGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatg > 2:191967‑M2/1‑139 (MQ=255) gCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatgg > 2:2972214‑M2/1‑138 (MQ=255) tgtgCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggatt > 2:2429514‑M2/1‑135 (MQ=255) gtgCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattg < 2:4090690‑M2/151‑18 (MQ=255) tgCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgc < 2:2777655‑M2/151‑19 (MQ=255) gCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCAGCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgcc > 2:4086862‑M2/1‑132 (MQ=255) aggaaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatg < 2:3448338‑M2/151‑25 (MQ=255) aggaaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatg < 1:2168476‑M2/151‑25 (MQ=255) aaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaag > 1:1238250‑M2/1‑124 (MQ=255) aaggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaag < 1:432854‑M2/151‑28 (MQ=255) ggaTTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcc < 2:2921581‑M2/151‑30 (MQ=255) ttGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctgg > 1:2207022‑M2/1‑119 (MQ=255) gAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGGCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaa < 2:3373015‑M2/151‑35 (MQ=255) gAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaa > 1:2970333‑M2/1‑117 (MQ=255) gCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaac < 1:3247694‑M2/151‑37 (MQ=255) cTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgcctgatgaagcctggaaact < 2:4379166‑M2/151‑38 (MQ=255) tGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactg < 1:1006304‑M2/151‑39 (MQ=255) ggCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgc > 2:452959‑M2/1‑112 (MQ=255) tCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgt < 1:3090308‑M2/151‑43 (MQ=255) cGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgtt < 1:138648‑M2/151‑44 (MQ=255) cTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttcca > 2:2455917‑M2/1‑105 (MQ=255) ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga < 1:2641084‑M2/151‑49 (MQ=255) ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga < 2:5323712‑M2/151‑49 (MQ=255) ggCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCGAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccaga < 2:5084176‑M2/151‑49 (MQ=255) aTCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagagggg < 2:474286‑M2/151‑53 (MQ=255) cccTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggtt < 2:3919894‑M2/151‑55 (MQ=255) ctctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttca > 1:3313798‑M2/1‑95 (MQ=255) tctGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcag > 1:479929‑M2/1‑94 (MQ=255) gACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaag < 2:3227374‑M2/151‑61 (MQ=255) cccAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggt > 2:4716490‑M2/1‑89 (MQ=255) cccAAGCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacactaccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggt > 2:4868336‑M2/1‑89 (MQ=255) ccAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtg < 1:1525169‑M2/151‑64 (MQ=255) ccAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtg < 2:558379‑M2/151‑64 (MQ=255) cAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtgg > 1:824219‑M2/1‑87 (MQ=255) aaTCAGCAACGGCAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggc > 2:3229410‑M2/1‑86 (MQ=255) aaTCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggc < 1:188447‑M2/151‑66 (MQ=255) cAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcg < 1:4313391‑M2/151‑69 (MQ=255) cAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcg < 2:2698551‑M2/151‑69 (MQ=255) gCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcgga < 1:2798063‑M2/151‑71 (MQ=255) aaCGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggact < 2:1325313‑M2/151‑73 (MQ=255) aaCGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggact < 2:1799648‑M2/151‑73 (MQ=255) aCGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactc < 1:3671776‑M2/151‑74 (MQ=255) ggAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactcta > 1:3925541‑M2/1‑76 (MQ=255) aaaGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctaca > 2:3118637‑M2/1‑74 (MQ=255) aaaGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctaca > 2:3204598‑M2/1‑74 (MQ=255) aaGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacag > 2:2725897‑M2/1‑73 (MQ=255) aGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacagg < 2:912262‑M2/151‑80 (MQ=255) ttCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattt < 2:3756878‑M2/151‑84 (MQ=255) tCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggattta > 1:2898150‑M2/1‑67 (MQ=255) tCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaagtggcgcggactctacaggattta > 1:4544776‑M2/1‑67 (MQ=255) ggATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaac > 1:2388423‑M2/1‑62 (MQ=255) ggATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagactggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaac < 2:4494069‑M2/151‑90 (MQ=255) gATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCATCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacg > 1:1630243‑M2/1‑61 (MQ=255) aTCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacga < 2:4623111‑M2/151‑92 (MQ=255) aTCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacga < 1:945111‑M2/151‑92 (MQ=255) tCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgat < 2:208646‑M2/151‑93 (MQ=255) cGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgatt > 1:77507‑M2/1‑58 (MQ=255) gACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattc > 2:3890840‑M2/1‑57 (MQ=255) aCCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcc < 2:5105391‑M2/151‑96 (MQ=255) tGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccac > 1:5425968‑M2/1‑53 (MQ=255) aTGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctc > 1:474286‑M2/1‑48 (MQ=255) aTGCTAGGTCTTTTGTTGCGAATACCAGCCTCAGGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctc > 2:2164571‑M2/1‑48 (MQ=255) cTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcaga < 2:3485581‑M2/151‑107 (MQ=255) cTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcaga < 1:3801887‑M2/151‑107 (MQ=255) tAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagat > 1:5121310‑M2/1‑44 (MQ=255) tAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagag < 2:2279866‑M2/151‑108 (MQ=255) aGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatc < 1:2362639‑M2/151‑109 (MQ=255) ggTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcg < 1:2627120‑M2/151‑110 (MQ=255) gTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgt > 1:2777655‑M2/1‑41 (MQ=255) tttGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgtt < 1:4653735‑M2/151‑115 (MQ=255) gttgCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgct > 1:3626703‑M2/1‑34 (MQ=255) ttgCGAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctc > 1:2610173‑M2/1‑33 (MQ=255) gAATACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagta > 1:3876990‑M2/1‑29 (MQ=255) aaatACCAGCGTCATGCCGCTGCCCTAAAacacgtccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgatgcccacccctcagatcgttgttgctcagta > 2:3628677‑M2/2‑29 (MQ=255) aaTACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtac < 2:1305745‑M2/151‑124 (MQ=255) aTACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacg > 1:172870‑M2/1‑27 (MQ=255) aTACCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacg > 1:2395087‑M2/1‑27 (MQ=255) aCCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgat < 2:404491‑M2/151‑127 (MQ=255) aCCAGCCTCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgat > 1:2538203‑M2/1‑25 (MQ=255) gCCTCTTGCCGCTGCCCTAAAacacttccaatggattgccttatgacgcctggcaactgctgttccagtggggttccgaaggtggcgcggactctacaggatttactaacgattccctcccctcagctcgttgttgctcagtacgatgctc < 2:4792616‑M2/151‑131 (MQ=255) tCATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggc < 2:4157391‑M2/151‑134 (MQ=255) cATGCCGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcg < 2:2188925‑M2/151‑135 (MQ=255) ccGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtctt < 1:5089037‑M2/151‑139 (MQ=255) ccGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtctt > 2:4532275‑M2/1‑13 (MQ=255) cGCTGCCCTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttg < 1:716025‑M2/151‑140 (MQ=255) cccTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaa > 1:4023332‑M2/1‑7 (MQ=255) cccTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaa > 2:4915519‑M2/1‑7 (MQ=255) cTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagt > 1:1649041‑M2/1‑5 (MQ=255) cTAAAacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagt < 2:1605039‑M2/151‑147 (MQ=255) aaaacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcg > 2:4571624‑M2/1‑3 (MQ=255) aacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcggg < 1:4461132‑M2/151‑151 (MQ=255) aacacttccaatggattgccttatgaagcctggaaactgctgttccagaggggttcagaaggtggcgcggactctacaggatttactaacgattcccacccctcagatcgttgttgctcagtacgatgatcggcgtcttggccaagtcggg < 1:5320559‑M2/151‑151 (MQ=255) | CTGACTCGATAAGCGTGTGCCAAAGGAAGGATTGAGCTGGCTCGACTGGCCATCCCTCTGACCCAATCAGCAACGGAAAGCCTTCAAAGGATCGACCTGCTAATGCTAGGTCTTTTGTTGCGAATACCAGCCTCATGCCGCTGCCCTAAAACACTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009974/5798377‑5798534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |