BRESEQ :: Evidence

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	341156–341386	342278	893–1123	162 [157]	[159] 162	RPPX_01355/RPPX_01370	cytochrome C oxidase/cbb3‑type cytochrome c oxidase subunit I

Only 100 of 162 total aligned reads displayed.

CGATGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCGGTCGCCATGGCGA  >  CP009974/341005‑341241

cGATGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGc                                                                                        <  1:3363308/151‑1 (MQ=255)

cGATGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACCGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCGTTGGc                                                                                        >  2:4762518/1‑151 (MQ=255)

cGATGCCAGGTTCGGTCCGATCATCGCCCAATACGCCGCCATGCCCGTAGAAGAAGCGACGAAGGACCCGCACGAGCAGAAAATGGCCAGCCGCCTGCTTGCATGCAACTGCACGGTGTGGCGCGCTTCCGACTCAAAGCGTGCGTTTCGc                                                                                        >  2:5235723/1‑151 (MQ=255)

 gATGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCt                                                                                       >  1:2584634/1‑151 (MQ=255)

 gATGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCt                                                                                       >  2:668381/1‑151 (MQ=255)

  ttGCCAGGTTCGGTCCGATATTCGCCAAAAACGCCGACATGCCCATAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCtt                                                                                      <  1:2174404/150‑1 (MQ=255)

  aTGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCtt                                                                                      <  1:2175802/151‑1 (MQ=255)

   tGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTc                                                                                     <  1:509309/151‑1 (MQ=255)

      cAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTcccc                                                                                  >  2:87661/1‑151 (MQ=255)

       aGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCa                                                                                 <  1:3242899/151‑1 (MQ=255)

       aGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCa                                                                                 <  1:2651012/151‑1 (MQ=255)

       aGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCa                                                                                 >  2:1948337/1‑151 (MQ=255)

       aGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCa                                                                                 <  1:1918846/151‑1 (MQ=255)

          ttCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAAcc                                                                              >  2:3004105/1‑151 (MQ=255)

          ttCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTCTGGCTTCCCCAAcc                                                                              >  2:2791177/1‑151 (MQ=255)

           tCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCt                                                                             >  2:5278129/1‑151 (MQ=255)

            cGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTc                                                                            >  1:2687738/1‑151 (MQ=255)

             ggTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTcc                                                                           >  2:2159849/1‑150 (MQ=255)

               tCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCAcc                                                                         <  1:2609032/151‑1 (MQ=255)

               tCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCAcc                                                                         <  1:1587378/151‑1 (MQ=255)

                 cGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTGCCACGCCAAGGGTGCCTTCGGCTTCCCCAACCTCACCGa                                                                       >  2:2492178/1‑151 (MQ=255)

                   aTCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACa                                                                     >  2:1149499/1‑151 (MQ=255)

                   aTCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACa                                                                     >  1:1533324/1‑151 (MQ=255)

                       tCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGa                                                                 >  2:2387036/1‑151 (MQ=255)

                           cAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTgg                                                             >  1:3092470/1‑151 (MQ=255)

                           cAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTgg                                                             >  1:4519650/1‑151 (MQ=255)

                            aaaTACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGgc                                                            >  2:4083483/1‑151 (MQ=255)

                            aaaTACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGgc                                                            <  2:2555434/151‑1 (MQ=255)

                             aaTACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGgcg                                                           <  1:4913201/151‑1 (MQ=255)

                              aTACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGgcgc                                                          >  1:1602903/1‑151 (MQ=255)

                               tACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCt                                                         <  1:1317034/151‑1 (MQ=255)

                                 cgccgcCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTgg                                                       <  2:2217009/151‑1 (MQ=255)

                                  gccgccGTGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTggg                                                      <  2:5353549/151‑1 (MQ=255)

                                     gccATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAACATGGGCAGCCGCCTGGTTGCCCCCAACTACACGATGTGCCACGGTTGCGACGCGCAGGGGGCCGCGGGCTTCCCCAACCGCACCGACAGTGAGTGGCGCGGGtgcg                                                   >  2:5364946/1‑151 (MQ=255)

                                     gccATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGggcg                                                   >  1:2654379/1‑151 (MQ=255)

                                     gccATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGggcg                                                   <  2:3605518/151‑1 (MQ=255)

                                       cATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGggcggc                                                 >  2:2009990/1‑151 (MQ=255)

                                        aTGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCTCCAACCTCACCGACAATGACTGGCGCTGGGgcggcg                                                >  1:1877848/1‑151 (MQ=255)

                                        aTGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGgcggcg                                                >  1:1639276/1‑151 (MQ=255)

                                        aTGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGgcggcg                                                <  2:4824631/151‑1 (MQ=255)

                                        aTGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGgcggcg                                                <  1:888440/151‑1 (MQ=255)

                                           cccGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGc                                             >  1:3443547/1‑151 (MQ=255)

                                              gTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCgg                                          >  1:347580/1‑151 (MQ=255)

                                               tAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGa                                         <  2:42100/151‑1 (MQ=255)

                                                agaagaAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGaa                                        <  2:1518529/151‑1 (MQ=255)

                                                agaagaAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGaa                                        >  2:3148838/1‑151 (MQ=255)

                                                agaagaAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGaa                                        >  1:2404606/1‑151 (MQ=255)

                                                agaagaAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCCCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGaa                                        >  1:371174/1‑151 (MQ=255)

                                                 gaagaaGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGGTCGCCCCCCACTGCTCGGTGCGCCACGGTCCCGAGGGGAACAGGCCCGCTCGCTCCGCCAACCACGCGGACAACGACTGGCGCTGGCGCGCCGAGCCggcac                                       >  2:3722217/1‑148 (MQ=255)

                                                  aagaagTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAAc                                      <  1:3543207/151‑1 (MQ=255)

                                                  aagaagTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAAc                                      >  1:1595424/1‑151 (MQ=255)

                                                  aagaagTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAAc                                      <  1:3542945/151‑1 (MQ=255)

                                                   agaagTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAAcc                                     >  1:3435687/1‑151 (MQ=255)

                                                    ggagTGGCGTAGGCCCCGCAGGCGCTGACAGTGGGCAGCCGCCTGTTTGCCTCCGACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCGTCCCCAGCCTCACCGACGATGGCTGGCGCTGGGGCGGCGCGCCGGAAGCCa                                    <  2:1846822/149‑1 (MQ=14)

                                                    gaagTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCa                                    >  2:4122036/1‑151 (MQ=255)

                                                    gaagTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCAGAAACCa                                    >  2:3334689/1‑151 (MQ=255)

                                                      agTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATc                                  >  2:3815753/1‑151 (MQ=255)

                                                      agTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATc                                  <  2:2957758/151‑1 (MQ=255)

                                                        tGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCaa                                <  1:3517918/151‑1 (MQ=255)

                                                        tGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACGGGCGCGGGGGCGGCGAGCCGGACACCAGCaa                                >  2:4615647/1‑151 (MQ=255)

                                                         ggCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAg                               <  1:759564/151‑1 (MQ=255)

                                                           cGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGac                             <  1:5351470/151‑1 (MQ=255)

                                                            gAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGacc                            <  2:4533139/151‑1 (MQ=40)

                                                            gAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGacc                            >  1:1831257/1‑151 (MQ=40)

                                                             aaGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGacca                           >  2:731842/1‑151 (MQ=40)

                                                              aGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGaccac                          >  2:4548541/1‑151 (MQ=38)

                                                                gACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGAccacca                        <  1:1076437/151‑1 (MQ=38)

                                                                gACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGAccacca                        <  1:1076376/151‑1 (MQ=38)

                                                                gACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGAccacca                        <  1:5179438/151‑1 (MQ=38)

                                                                gACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGAccacca                        >  1:1833043/1‑151 (MQ=38)

                                                                gACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGAccacca                        <  1:169120/151‑1 (MQ=38)

                                                                 aCCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcat                       >  1:1849252/1‑151 (MQ=38)

                                                                  cccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatc                      <  1:1958033/151‑1 (MQ=37)

                                                                  cccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatc                      <  1:3585947/151‑1 (MQ=37)

                                                                  cccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatc                      <  1:1825478/151‑1 (MQ=37)

                                                                  cccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatc                      <  1:3799856/151‑1 (MQ=37)

                                                                  cccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatc                      >  1:4849237/1‑151 (MQ=37)

                                                                   ccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatca                     >  1:4982679/1‑151 (MQ=35)

                                                                   ccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatca                     <  1:2944405/151‑1 (MQ=35)

                                                                   ccGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCCGGGGCGGCGAGCCGGAAACCAGCAAGACCACcatca                     >  2:3116597/1‑151 (MQ=25)

                                                                    cGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatcat                    <  1:4694961/151‑1 (MQ=34)

                                                                    cGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatcat                    <  1:127997/151‑1 (MQ=35)

                                                                    cGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACcatcat                    <  1:2893427/151‑1 (MQ=35)

                                                                      cAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGa                  <  1:1409739/151‑1 (MQ=33)

                                                                      cAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGa                  <  2:2804911/151‑1 (MQ=33)

                                                                       aGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAg                 >  2:537130/1‑151 (MQ=33)

                                                                       aGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAg                 >  2:284170/1‑151 (MQ=32)

                                                                       aGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAg                 >  1:3604636/1‑151 (MQ=33)

                                                                       aGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAg                 >  1:3316126/1‑151 (MQ=33)

                                                                        ggCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGc                >  1:995476/1‑151 (MQ=31)

                                                                        ggCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGc                <  1:4200415/151‑1 (MQ=32)

                                                                         gcgcTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCg               <  2:2584634/151‑1 (MQ=31)

                                                                         gcgcTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGCCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCg               >  1:2798205/1‑151 (MQ=14)

                                                                          cgcTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCgg              <  2:197938/151‑1 (MQ=32)

                                                                           gcTGAAAATGTGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGCGCCTTGGGCTTCCCCAACCGCACCGACAGAGACTGGCGCTGGAGCGGCGAGCCGGACACCATCAAGACCACCATCCTGAGCgat             >  2:3491731/1‑149 (MQ=11)

                                                                            cTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCGGTc            >  2:3959789/1‑151 (MQ=31)

                                                                             tGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCGGTCg           <  1:3456157/151‑1 (MQ=31)

                                                                              gAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCGGTCGc          >  1:184877/1‑151 (MQ=31)

                                                                               aaaaTGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCGGTCGcc         <  1:450915/151‑1 (MQ=11)

                                                                                      gccgccgccTGTTTGCCTCCAACGGCTCGGTGTGCCACGCTTCCGGCGCCACGGGTGCCTTTGGCTTCCCCAACCTCCCCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCGGTCGCCATGGCgt  <  1:3789284/148‑2 (MQ=1)

CGATGCCAGGTTCGGTCCGATCTTCGCCAAATACGCCGCCATGCCCGTAGAAGAAGTGGCGAAGGACCCGCAGGCGCTGAAAATGGGCAGCCGCCTGTTTGCCTCCAACTGCTCGGTGTGCCACGGTTCCGACGCCAAGGGTGCCTTTGGCTTCCCCAACCTCACCGACAATGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGAGCGGTCGCCATGGCGA  >  CP009974/341005‑341241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`