Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099744,132,2310AC74.0% 440.3 / 163.5 238intergenic (+147/+82)RPPX_18375/RPPX_18380membrane protein/phosphonoacetaldehyde hydrolase
Reads supporting (aligned to +/- strand):  ref base A (25/36);  new base C (88/86);  total (114/124)
Fisher's exact test for biased strand distribution p-value = 2.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 241 total aligned reads displayed.

AATAGCGTTCTAGCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACACAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCGGGGAG  >  CP009974/4132080‑4132378
                                                                                                                                                        |                                                                                                                                                     
  tAGCGTTCTAGCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGAcaca                                                                                                                                                     <  1:1459075/151‑1 (MQ=255)
  aaGCGTTCTAGGTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGAcaca                                                                                                                                                     <  2:1672762/150‑1 (MQ=255)
    gCGTTCTAGCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAgg                                                                                                                                                   <  1:4632503/151‑1 (MQ=255)
    gCGTTCTAGCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAgg                                                                                                                                                   >  1:4977722/1‑151 (MQ=255)
          tAGCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTg                                                                                                                                             >  1:786241/1‑151 (MQ=255)
           aGCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGa                                                                                                                                            <  2:477769/151‑1 (MQ=255)
            gCTCAGGTTTGTCGGCCGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGACAATTTCCACTCGCCATTCATCGTTGCCGCTGCTACCGTATTCGCGGGTTAACCCGGTCCTCCC‑CCAGGTCGAGGG‑GGGCACACGCCGGTgcc                                                                                                                                           >  2:3451171/1‑149 (MQ=17)
            gCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGa                                                                                                                                            <  2:286299/151‑1 (MQ=255)
             cTCAGGTTTTTCGGCGGTAGGAGCGGTTTCACCCGCGAAAGGGCCGGCCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTACCGCTGCTACCGTATTCCCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGAtt                                                                                                                                          <  2:2703823/151‑1 (MQ=14)
                   tttGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGgcgc                                                                                                                                    <  1:3203656/151‑1 (MQ=255)
                   tttGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCCCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATCGGgcgc                                                                                                                                    >  1:3493700/1‑151 (MQ=255)
                    ttGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCa                                                                                                                                   <  1:1105508/151‑1 (MQ=255)
                    ttGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGGGATTGGGCGCa                                                                                                                                   >  1:795592/1‑151 (MQ=255)
                      gTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGGCACCGGGCGGGGATTTGGCCCAgg                                                                                                                                 >  2:2254891/1‑151 (MQ=17)
                         ggCCGTAGGAGCGGGTTCGCCCGCGAAGAGGCCGGGCCGGCTGGCCAATTTCCACCCGCCGGTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGcc                                                                                                                               <  2:3158900/151‑1 (MQ=11)
                          gcggTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTCCCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCcgt                                                                                                                             <  1:1869530/148‑2 (MQ=255)
                          gCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCcgg                                                                                                                             >  1:3427604/1‑150 (MQ=255)
                           ccGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCcg‑c                                                                                                                            <  2:3456267/151‑1 (MQ=255)
                            cGTAGGAGCGGGTTCGCCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCcgtcg                                                                                                                           <  1:2823277/151‑4 (MQ=255)
                             gTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCcgtcgt                                                                                                                          >  1:1049163/1‑147 (MQ=255)
                               aGGAGCGGGCTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCcgtcgtgt                                                                                                                        <  2:4253972/151‑7 (MQ=255)
                                ggAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCcgtcgtgta                                                                                                                       <  1:4984052/151‑8 (MQ=255)
                                         tcccccGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCCCCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAACCCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCCGTCGTGTAGGAGCgggt                                                                                                              <  2:3320755/148‑3 (MQ=11)
                                         ggacgagcgAAGGGGCCGGCCCTGCTGGCCAATTACCACCCGCCGTTCCCCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCt                                                                                                             <  2:353393/145‑1 (MQ=11)
                                          cccgcgcgAAAGGGCCGGGCCGGTTCGCCAATTTCCGCCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCCGTCGTGTAGGAGCgggtt                                                                                                             <  2:4033066/147‑4 (MQ=11)
                                          cACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTGCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCCGTCGTGTAGGAGCgggtt                                                                                                             <  2:2049571/151‑4 (MQ=11)
                                           gcccGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCCGTCGTGTAGGAGCgggttt                                                                                                            <  1:5420841/150‑5 (MQ=11)
                                            cccGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGcc                                                                                                                               >  1:2658441/1‑131 (MQ=255)
                                            cccGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGcc                                                                                                                               <  2:2658441/131‑1 (MQ=255)
                                             ccGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCCGTCGTGTAGGAGCgggtttac                                                                                                          >  1:3295253/1‑145 (MQ=11)
                                              cgcgAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGG‑GGACACAGGTCGGTGATTGGGCGCAGGCCGTCGTGTAGGAGCgggtttacc                                                                                                         <  1:4219168/151‑8 (MQ=11)
                                                        ccggccctgCTGGCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAggg                                                                                              >  1:611055/1‑151 (MQ=14)
                                                           gccctgctGGCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCGCAAGGGCCg                                                                                           >  2:145442/8‑151 (MQ=14)
                                                            ccctgctGGCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGc                                                                                          >  2:3751110/7‑151 (MQ=17)
                                                               tgcttgCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAACGGCCGCTTc                                                                                       >  2:4458061/6‑151 (MQ=17)
                                                                gctGGCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTcc                                                                                      <  2:1633212/149‑1 (MQ=255)
                                                                gctGGCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTcc                                                                                      <  1:1550045/149‑1 (MQ=255)
                                                                 ctGGCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCca                                                                                     <  1:1672425/150‑1 (MQ=255)
                                                                   ggCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCcaca                                                                                   <  1:2956539/151‑1 (MQ=255)
                                                                    gCCACTTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAACCCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAg                                                                                  <  1:883467/151‑1 (MQ=255)
                                                                    gCCAATTTCCACCCGGCGTTCCCCGCTGCCGCTGCTACCGTATTCGCGGGTAACCCCGCTTCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGGTTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAg                                                                                  <  1:4591040/151‑1 (MQ=18)
                                                                    gCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTGTTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAg                                                                                  <  2:1422549/151‑1 (MQ=255)
                                                                    gCCAATTACCACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAg                                                                                  >  2:2465929/1‑151 (MQ=255)
                                                                      cAATTACCCCCCACCGTTCACCGTTGCCGCTGCGACCGGATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGGGGCCCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCg                                                                                <  2:1400465/151‑1 (MQ=18)
                                                                         tttCCCCCCGCCGTTCACCTCTGCCGCAGCTACCGTCTTCTCGGGGAAACCCGCTCCTACG‑CGGGATCGGGCGTGGACCCAGGGCGGTTATTGGGCGCAGGCCG‑CA‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGaaa                                                                             <  1:3906930/151‑1 (MQ=255)
                                                                            ccACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAACCCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCg                                                                          <  2:5323423/151‑1 (MQ=255)
                                                                            ccACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCCCTCCTACG‑CCGGATCGGGGGTTGACCCAGGTCGGGGATTGGGCGCAGGCCG‑CG‑GCAGGCGCGGCGTGCTGTGGCGCAAGGGCCGCTCCCCCACCCAAACCg                                                                          >  2:4558355/1‑151 (MQ=14)
                                                                             cACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCCTCCACAGCGAAACCGc                                                                         >  2:3563350/1‑151 (MQ=255)
                                                                             cACCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CA‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGc                                                                         >  2:5201343/1‑151 (MQ=255)
                                                                              aCCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCa                                                                        <  2:5075863/151‑1 (MQ=255)
                                                                              aCCCGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACCAGGGCCGCTTCCACAGCGAAACCGCa                                                                        >  2:4327901/1‑151 (MQ=255)
                                                                               cccGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAg                                                                       <  1:1409160/151‑1 (MQ=255)
                                                                               cccGCCGTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAg                                                                       >  1:4713654/1‑151 (MQ=255)
                                                                                  gccgTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGCGCGGCTTTGTGTGGCACAACGGCCGCTTCCACCGCGAAACCGCAgggg                                                                    >  1:1810150/1‑151 (MQ=18)
                                                                                   ccgTTGACCGCTGCCGCTGCTACCGTAGTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGt                                                                   <  2:1220901/151‑1 (MQ=255)
                                                                                    cgTTCACCGCTGCCGCTGCTACCGTATTGGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTc                                                                  <  1:3693475/151‑1 (MQ=255)
                                                                                    cgTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTc                                                                  >  1:2202925/1‑151 (MQ=255)
                                                                                     gTTCACCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCa                                                                 <  2:1839419/151‑1 (MQ=255)
                                                                                         aCCGCTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAg                                                             >  2:811142/1‑151 (MQ=255)
                                                                                          ccgctgccgctgCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTAGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAgg                                                            >  1:5172271/1‑151 (MQ=255)
                                                                                           cgctGCGGCTGCTCCCGTACTCGCGGGTAAACCCGCTCATACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGc                                                           <  2:1139242/148‑1 (MQ=25)
                                                                                           cgctGCCGCTGCTACCGTAGTCGCGGGTACACCCGCTCCTACG‑GCGGATCGGGGGGGGAGCCAGAGCGGTGATTCGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCTACAGCGAAACCGCAGGGGTCAGAAGGc                                                           <  2:3086131/148‑1 (MQ=255)
                                                                                              tGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTg                                                        >  1:5092448/1‑151 (MQ=255)
                                                                                                 cGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCgg                                                     <  2:5353193/151‑1 (MQ=255)
                                                                                                 cGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCgg                                                     <  1:2377787/151‑1 (MQ=255)
                                                                                                    tgctACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCAt                                                  <  1:2147344/151‑1 (MQ=255)
                                                                                                      ctACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCAtct                                                <  1:1028107/151‑1 (MQ=255)
                                                                                                      ctACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCAtct                                                >  1:2394463/1‑151 (MQ=255)
                                                                                                       tACCGGATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCAtctc                                               <  1:3746325/151‑1 (MQ=255)
                                                                                                        aCCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCg                                              >  1:2254680/1‑151 (MQ=255)
                                                                                                        aCCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCg                                              <  1:1593120/151‑1 (MQ=255)
                                                                                                         cctgaTTCGCGGGTAAGCCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGc                                             <  2:786241/147‑1 (MQ=255)
                                                                                                           gctgttccgGGGAAACCCGCCTCTACGCCCGGAGTGGGGG‑GGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGccc                                           <  2:2442308/144‑1 (MQ=37)
                                                                                                                  ggggTGAACCCGCTCCAGCG‑CCGGGTCGGGGGTGGACGCAGCTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCa                                    <  2:1753151/150‑1 (MQ=38)
                                                                                                                   gggTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAg                                   >  1:1710041/1‑151 (MQ=255)
                                                                                                                     gTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGgc                                 >  1:4875117/1‑151 (MQ=255)
                                                                                                                       aaaCCCGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGgcgc                               >  1:5341629/1‑151 (MQ=255)
                                                                                                                          cccGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCgg                            <  1:3085764/151‑1 (MQ=255)
                                                                                                                          cccGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCgg                            <  1:1691651/151‑1 (MQ=255)
                                                                                                                           ccGCTCCTGCG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGt                           <  2:56562/151‑1 (MQ=255)
                                                                                                                           ccGCTCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCATGCGCCGGt                           >  2:1075912/1‑151 (MQ=255)
                                                                                                                            cgcgCCTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGtt                          <  1:2301663/151‑1 (MQ=255)
                                                                                                                                ccaaCG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATg                      <  2:1364909/148‑1 (MQ=255)
                                                                                                                                ccTACG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATg                      >  1:563231/1‑151 (MQ=255)
                                                                                                                                   aCG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCg                   >  1:3038670/1‑151 (MQ=255)
                                                                                                                                    cG‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCgg                  <  2:2934837/151‑1 (MQ=255)
                                                                                                                                     g‑CCGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGc                 >  2:2270885/1‑151 (MQ=255)
                                                                                                                                        cGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCaa               >  1:4450783/1‑151 (MQ=255)
                                                                                                                                        cGGATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCaa               >  2:463210/1‑151 (MQ=255)
                                                                                                                                         ggATCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAAt              >  2:3899510/1‑151 (MQ=255)
                                                                                                                                            tCGGGGGTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGAc           <  1:1609093/151‑1 (MQ=255)
                                                                                                                                              gggggTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGGCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACtt         >  2:3017818/1‑151 (MQ=255)
                                                                                                                                               ggggTGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTc        <  2:4914828/151‑1 (MQ=255)
                                                                                                                                                gggTGGACCCAGGTCGGTGATTGGGCGCCGGCCG‑AG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCg       <  1:739395/151‑1 (MQ=255)
                                                                                                                                                 ggTGGACCGAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCgg      <  2:2505416/151‑1 (MQ=255)
                                                                                                                                                   tGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCCGGCGCCGGTTGATGTCGGCACTGACCCCgggg    >  2:1979081/1‑151 (MQ=255)
                                                                                                                                                   tGGACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCgggg    >  1:2587972/1‑151 (MQ=255)
                                                                                                                                                   gggACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCgggg    <  1:4066045/150‑1 (MQ=255)
                                                                                                                                                    ggACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCGGGga   >  2:1892759/1‑151 (MQ=255)
                                                                                                                                                     gACCCAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCGGGgan  <  1:2437454/151‑2 (MQ=255)
                                                                                                                                                        |                                                                                                                                                     
AATAGCGTTCTAGCTCAGGTTTGTCGGCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGGCCGGTTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACG‑CCGGATCGGGGGTGGACACAGGTCGGTGATTGGGCGCAGGCCG‑CG‑GTAGGAGCGGCCTTGTGTGGCACAAGGGCCGCTTCCACAGCGAAACCGCAGGGGTCAGAAGGCTTGCGGCATCTCGCCCTTGGCCAGGCGCCGGTTGATGTCGGCAATGACTTCGGGGAG  >  CP009974/4132080‑4132378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑