| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,148,563 | G→A | intergenic (+90/+122) | RPPX_14035 → / ← RPPX_14040 | membrane protein/bifunctional glyoxylate/hydroxypyruvate reductase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,148,563 | 0 | G | A | 93.4% | 571.3 / 8.0 | 182 | intergenic (+90/+122) | RPPX_14035/RPPX_14040 | membrane protein/bifunctional glyoxylate/hydroxypyruvate reductase B |
| Reads supporting (aligned to +/- strand): ref base G (4/8); new base A (69/100); total (74/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
TGCTGGTGTTTCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGTTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCATTCCAAAACGGTCAGCCCTTCCACACCTGCGGGTTCA > CP009974/3148415‑3148710 | tgCTGGTGTTTCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAgagg < 1:376040/151‑1 (MQ=255)tgCTGGTGTTTCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAgagg < 1:5260421/151‑1 (MQ=255)tgCTGGTGTTTCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAgagg < 1:2489552/151‑1 (MQ=255) ttGGTGCTTCGCAAGCGGTGGGCCGGGGTGGGTGAGGGTGGTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCTGCCCTGTCGCGGTTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGcc < 2:3760184/150‑1 (MQ=37) tgtTTCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGca > 1:875114/1‑151 (MQ=255) tgtTTCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGGTTAACCCCGGAGAGGCCCGca > 2:1224786/1‑151 (MQ=39) tttCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGcaca < 1:2786834/151‑1 (MQ=255) tttCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGcaca < 1:2550538/151‑1 (MQ=255) tCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAgg > 2:5289924/1‑151 (MQ=255) cGCAAGCCCCGGGCGAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGc < 1:656054/151‑1 (MQ=255) cGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGCAGAGGCCAGCACAGGc > 1:4807652/1‑151 (MQ=255) cGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGc > 2:1878383/1‑151 (MQ=255) cGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGc > 2:4706398/1‑151 (MQ=255) gCAAGCGCCGGGCGGGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGAGGCTTGCCTGGGCCGGCCCTCTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCa < 1:2622546/151‑1 (MQ=37) cAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCATTTCGCGGGTAAACCCGCTCCTACAGGCAAGTGCACCCCCGTTTTAGTAGCGGGTTGACTCGCGAAGACACCAGCACAgaacc > 2:534533/1‑147 (MQ=37) gCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTGGGGGGTATAGCCGCACCTCCAGGTCGGTGAACACCTGTTGTGGGAGCGGGTGTACGTGCGGAGATGCCAGCACAGGcgatgg > 2:2139348/1‑146 (MQ=255) gCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTcc > 2:2041182/1‑151 (MQ=255) cccGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTCTAGGAGCGGGTCTACCAGCGCAGAGGCCAGCCCAGGCCCACCaa > 2:1518792/1‑151 (MQ=38) cccGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTCTGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCACAGGCACTCCaa > 2:4929619/1‑151 (MQ=255) ccGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCaaa > 1:3355870/1‑151 (MQ=255) cGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGACCAGCACAGGCACTCCAAAt > 1:128486/1‑151 (MQ=255) gggCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAAtt < 1:5394478/151‑1 (MQ=255) gggCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTCTGTAGGAGCGGGCTTACACGCGAAGAGGCCCGCCCAGGCACACCaaaga > 1:1450409/1‑149 (MQ=37) ggcggggTGGCTGAGGGTGTTGTGGTCGCCAGATAGTGATGCTTGCCTGGGCCGGGCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGt < 2:4731586/147‑1 (MQ=255) ggggtgggtGAGGCGGTTGTGGTGGCGAAATAGTGATGGTGGCCTGGGCCGGCAGTTTCGCGGGTGAACCCGCTAGTACGGGGCAGTGGACACCCGTGGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAgg < 2:2338560/150‑1 (MQ=21) aGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAgg < 1:4863098/151‑1 (MQ=255) gttgaGGGTGTTGTGGCCGGCAAATAGTGATGCTTGCGTGGGCCGGCGCTTTCGCGGTTAAACCCGCTCGTACAGGGCAGTGCACACCCTGTGTAGGATCGGGTTTACCCGCGAAGAGGGCAGCACAGGCACTCCAAATTGTAGGAGCGGg > 2:3733329‑M2/3‑150 (MQ=255) ttgAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgt > 1:2464258‑M2/2‑149 (MQ=255) tGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTGCCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgat < 2:3875329‑M2/151‑4 (MQ=255) gAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgttt < 1:1001669‑M2/151‑5 (MQ=255) aGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttc < 1:5228726‑M2/151‑6 (MQ=255) aGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgttta < 1:3375670‑M2/151‑6 (MQ=255) gggTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGGGGctttac < 1:3230288‑M2/151‑7 (MQ=255) gggTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttac < 2:4489172‑M2/151‑7 (MQ=255) gggTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGggttac < 2:2472067‑M2/151‑7 (MQ=255) gttgtGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGGTCCGACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATGGTAGGAGCGGggttacccgc < 1:1174686‑M2/151‑11 (MQ=255) ttggTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaa > 1:2933013‑M2/2‑138 (MQ=255) ggcgcCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGGCAGTGCACACCCTTTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggg > 2:3282885‑M2/3‑135 (MQ=255) gTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGGAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggg > 2:2032611‑M2/1‑135 (MQ=255) ctatgagttatGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccgg > 2:1404252‑M2/6‑130 (MQ=255) gaagAGTGGTGCTTGCGGGGGCCGGCCCTTTCGCGGGTAAGCCCGCTCCGACAGGGCAGTGCACGCCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggc > 2:1047985‑M2/2‑129 (MQ=255) aaTAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAACTGTAGGAGCGGgtctacccgcgaaggggccagcc < 2:2919244‑M2/151‑24 (MQ=255) tAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttaccctcgaagcggccggcacc < 1:4972492‑M2/151‑26 (MQ=255) gggatGCTTGCCTGGTCCGGCCCTTTCGCGGATAAACCCGCTCCTACAGGGCAGTGCACGCCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacagg > 1:5040708‑M2/3‑124 (MQ=255) gTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacagg > 1:4403740‑M2/1‑124 (MQ=255) gTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacagg < 1:5376592‑M2/151‑28 (MQ=255) gCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactc > 1:750784‑M2/1‑119 (MQ=255) ttGCCGGGGCGGGCCTGTGCGCGGGTAAACCCGCTCCTGCAGGGCAGTGCCCACCCTTTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactcca > 2:5208345‑M2/1‑117 (MQ=255) tGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattg < 1:2049319‑M2/151‑40 (MQ=255) gccgtccCTTTCGGGGGTAACCCCGGTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtag > 1:3529605‑M2/1‑109 (MQ=255) gccggccgTTGCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtag > 2:2612925‑M2/1‑109 (MQ=255) ccggccCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGACCGGgtttacccgcgaaggggccggcacaggcactccaaattgtagg < 2:3526316‑M2/151‑44 (MQ=255) tttCGCGGGTAAGCCCGCTCCTACAGGGCAGTGCACGCCCTTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggtt > 2:2373509‑M2/1‑101 (MQ=255) tCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttatccgcgaaggggcctgtacaggcactgcaaagtgttggagcggcttt < 2:1946852‑M2/151‑53 (MQ=255) tCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGttt > 1:1303877/1‑151 (MQ=255) aaaCCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcga < 1:1974371‑M2/151‑61 (MQ=255) aaaCCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcgggtttacccgcga < 1:5298151‑M2/151‑61 (MQ=255) ccGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgcttacccgcggaggggccggcacaggcaccccacactgcaggagcggccctacccgcgacgtg < 2:2611649‑M2/151‑65 (MQ=255) ccGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggg < 1:4873559‑M2/151‑65 (MQ=255) cGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaagggg < 1:1779046‑M2/151‑66 (MQ=255) cTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggcc > 1:4857828‑M2/1‑84 (MQ=255) cTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccagcacaggcactcaaaattggacgagccgttctacccgcgaagcgccc < 2:4443841‑M2/151‑68 (MQ=255) tCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccg > 1:4706398‑M2/1‑83 (MQ=255) ccctACAGGACAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccg > 1:951695‑M2/2‑83 (MQ=255) ccTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccgg < 1:2330615‑M2/151‑70 (MQ=255) tccagggcagggcaCCCCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggca > 1:2904008‑M2/3‑80 (MQ=255) gagGGGGGTGGACACCCGTTGTAGGGGCGGGTTTAGCCGCGAAGAGGCCAGCACAGGCACTCCAAAGTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttgcccgcgaaggggccggcaca > 1:3451093‑M2/2‑78 (MQ=255) gCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggca < 2:757511‑M2/151‑78 (MQ=255) ggggcacACCCTTGGTAGGAGCGGGTTTAACCGCGAAGAGGCCAGCACAGGCACTACAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcact > 2:692993‑M2/4‑72 (MQ=255) aGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggtcttacccgcgaaggggccggcgcaggcacc < 2:4282037‑M2/151‑80 (MQ=255) gTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggtcttacccgcgaaggggccggcacaggccctc < 2:5389383‑M2/151‑81 (MQ=255) gCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttac < 2:4437433‑M2/123‑55 (MQ=255) gCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttac < 2:4437059‑M2/123‑55 (MQ=255) gCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttac > 1:4437059‑M2/1‑69 (MQ=255) gCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttac > 1:4437433‑M2/1‑69 (MQ=255) tccaaattGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCACAGGCACTCCAAATTGTAGGAGCGGTTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCACTCCaaaa > 1:86720/7‑151 (MQ=255) cccccTTTGTGAGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCATTCCaaaa < 2:1303877/149‑1 (MQ=255) cccTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaatggtaggagcggctttacccgcgaaggggccggcacaggcacaccaaattg < 1:1667044‑M2/151‑88 (MQ=255) cccTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccagcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaactcc < 2:2699610‑M2/151‑88 (MQ=255) tttGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtag > 1:1550411‑M2/1‑61 (MQ=255) ttGTAGGAGCGGTTTTACCCGCGAAGGGGCCGGCACAGGCCCTCCAAATTCTAGAAGCAGTGTTACCGGCGAAGGGGCCAGCACAGGCACTCCAACTTGCATGAGCTGGCGCACCCGCGACGCGTCCCGCACAGACACTCCAAAACGGGCa > 2:1457883/1‑151 (MQ=9) ttGAAGGAGCGGGTTTACCCGCGAAGGGGCCGGCACAGGCACTCCAAATTGTAGGAGCGGTTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCATTCCAAAACGGTCa < 1:4578569/151‑1 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCCAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaagtgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagc < 1:3495198‑M2/151‑95 (MQ=255) gAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCgg < 2:1739419/54‑1 (MQ=35) gAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtagtagcggg < 1:2700338‑M2/151‑98 (MQ=255) aGCGGGTTTTCCGGCGAAGGGGCCGGCACAGGCACTCCAAATTGTAGGAGCGGTTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCATTCCAAAACGGTCAGCCCTTc < 1:3875329/151‑1 (MQ=255) aGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggtt < 1:1030185‑M2/151‑99 (MQ=255) aGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggtt < 1:138215‑M2/151‑99 (MQ=255) aGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggtt < 1:906909‑M2/151‑99 (MQ=255) cggtcatACCCACAAAGGGGCCAGCACAGGCAATACACATTGTAGGAGCGGTTTTACCAGCGAAGGGGCCAGCACAGGCACTCCAAATAGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCATTCCAAAACGGTCAGCCCTTCca < 2:2084089/145‑1 (MQ=18) gttttACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGTTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCATTCCAAAACGGTCAGCCCTTCcaca < 1:4550254/149‑1 (MQ=255) ttACCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccg < 1:211720‑M2/151‑106 (MQ=255) aCCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcg > 1:2326885‑M2/1‑44 (MQ=255) aCCCGCGAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaaatgtaggagcgggcttacccgcg < 2:2943356‑M2/151‑108 (MQ=255) gcgAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggcgcggctttacccgcgaagg < 1:5393972‑M2/151‑112 (MQ=255) cgAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttgtacccgcgaaggg < 2:3728391‑M2/151‑113 (MQ=255) gAGGGGGCCAGCACAGGCACTCCAAATTGGAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgacgggg > 2:4472258‑M2/1‑38 (MQ=255) gAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcgggtttacccgcgaagggg < 2:4587295‑M2/151‑114 (MQ=255) gAAGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggctttacccgcgaagggg < 2:2305900‑M2/151‑114 (MQ=255) aaGAGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGgtttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggccggcacaggcactccaaattgtaggagcggttttacccgcgaaggggc > 1:4489172‑M2/1‑37 (MQ=255) | TGCTGGTGTTTCGCAAGCCCCGGGCCAGGGTGGCTGAGGGTGTTGTGGTCGCCAAATAGTGATGCTTGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGCAGTGCACACCCTTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGTTTTACCCGCGAAGGGGCCAGCACAGGCACTCCAAATTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGGCATTCCAAAACGGTCAGCCCTTCCACACCTGCGGGTTCA > CP009974/3148415‑3148710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |