Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 3,400,410 A→G T381A (ACC→GCC)  RPPX_15160 → chemotaxis protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,400,4100AG100.0% 851.6 / NA 240T381A (ACC→GCC) RPPX_15160chemotaxis protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (130/110);  total (130/110)

Only 100 of 240 total aligned reads displayed.

GCTGGCTCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTACCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCAAATG  >  CP009974/3400263‑3400556
                                                                                                                                                   |                                                                                                                                                  
gctggctCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCg                                                                                                                                                 >  1:4392947/1‑151 (MQ=255)
     ctCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCgaccag                                                                                                                                            >  2:1317611/1‑151 (MQ=255)
      tCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCgaccaga                                                                                                                                           >  2:3458383/1‑151 (MQ=255)
        cGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCgaccagacc                                                                                                                                         <  1:1587101/151‑1 (MQ=255)
         gggCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCgaccagacca                                                                                                                                        <  1:247829/151‑1 (MQ=255)
            cagcagGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATc                                                                                                                                     <  1:2066884/151‑1 (MQ=255)
             ggcagGGCCTGGCACGCATGGAAGAGACCATGCAGCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATct                                                                                                                                    <  2:2129827/150‑1 (MQ=255)
             agcagGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATct                                                                                                                                    >  1:702596/1‑151 (MQ=255)
             agcagGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTCATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATct                                                                                                                                    >  2:4987494/1‑151 (MQ=255)
                 gggCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATctgctg                                                                                                                                >  1:3696008/1‑151 (MQ=255)
                  ggCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGt                                                                                                                               >  1:943254/1‑151 (MQ=255)
                     cTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGc                                                                                                                            >  2:1378743/1‑151 (MQ=255)
                       ggCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTc                                                                                                                          <  1:4518422/151‑1 (MQ=255)
                       ggCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCAGCGTCAAGGTTGCCGACCAGACCAATCTCCTGTCGCTc                                                                                                                          >  2:4257925/1‑151 (MQ=255)
                        gCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCa                                                                                                                         >  1:4925961/1‑151 (MQ=255)
                        gCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCa                                                                                                                         <  2:3696008/151‑1 (MQ=255)
                         cACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCaa                                                                                                                        >  1:560315/1‑151 (MQ=255)
                          aCGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAc                                                                                                                       <  1:1150733/151‑1 (MQ=255)
                          aCGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAc                                                                                                                       <  1:2201830/151‑1 (MQ=255)
                          aCGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAc                                                                                                                       >  1:1387868/1‑151 (MQ=255)
                           cGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAcg                                                                                                                      >  2:3722962/1‑151 (MQ=255)
                            gCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAcgc                                                                                                                     >  2:2391555/1‑151 (MQ=255)
                             cATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAcgcc                                                                                                                    >  1:4993070/1‑151 (MQ=255)
                              aTGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAcgccg                                                                                                                   >  1:5204044/1‑151 (MQ=255)
                                  aaGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCac                                                                                                               >  2:3770909/1‑150 (MQ=255)
                                    gagaCCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAGGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCg                                                                                                             <  1:4080738/151‑1 (MQ=255)
                                      gaCCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGaa                                                                                                           <  1:2230442/151‑1 (MQ=255)
                                        ccATGCGCCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGc                                                                                                         <  2:2893271/151‑1 (MQ=255)
                                        ccATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGc                                                                                                         >  1:1783794/1‑151 (MQ=255)
                                           tGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGa                                                                                                      <  1:3212292/151‑1 (MQ=255)
                                           tGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGa                                                                                                      >  1:2828712/1‑151 (MQ=255)
                                            gCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGaa                                                                                                     <  2:4097487/151‑1 (MQ=255)
                                            gCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGaa                                                                                                     >  1:2669198/1‑151 (MQ=255)
                                             cACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGaaa                                                                                                    >  1:1065481/1‑151 (MQ=255)
                                              aCCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGaaaa                                                                                                   <  1:827356/151‑1 (MQ=255)
                                               ccAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAg                                                                                                  >  2:367753/1‑151 (MQ=255)
                                                cAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAgg                                                                                                 >  2:732566/1‑151 (MQ=255)
                                                cAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAgg                                                                                                 <  1:166589/151‑1 (MQ=255)
                                                cAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAgg                                                                                                 >  1:5238051/1‑151 (MQ=255)
                                                 aGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGc                                                                                                >  1:311083/1‑151 (MQ=255)
                                                   gTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCg                                                                                              <  2:4379730/151‑1 (MQ=255)
                                                      aTGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTg                                                                                           <  1:3933084/151‑1 (MQ=255)
                                                        gggCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGaa                                                                                         >  1:899520/1‑151 (MQ=255)
                                                        gggCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGaa                                                                                         >  1:1317666/1‑151 (MQ=255)
                                                        gggCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGaa                                                                                         <  2:3547788/151‑1 (MQ=255)
                                                          gcgcTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAata                                                                                       >  1:2991896/1‑151 (MQ=255)
                                                           cgcTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAatat                                                                                      <  1:4855339/151‑1 (MQ=255)
                                                            gcTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATg                                                                                     >  1:4743199/1‑151 (MQ=255)
                                                              tGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGc                                                                                   >  2:5279632/1‑151 (MQ=255)
                                                              tGCCGACCTGGTCAATGCCAAGCCCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCACCGACGCGGAACAGGCCGGCGAATATGGc                                                                                   >  2:2171976/1‑151 (MQ=255)
                                                               gCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGcc                                                                                  >  2:759770/1‑151 (MQ=255)
                                                                  gACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCcgcg                                                                               >  2:1588952/1‑151 (MQ=255)
                                                                    ccTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGCAAAGGCCGGTGAATATGGCCGCGGc                                                                             >  2:5395217/1‑151 (MQ=255)
                                                                    ccTGGTCAATGACAAGATCGGTATCCCCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGc                                                                             <  1:3170195/151‑1 (MQ=255)
                                                                     ctagTCAATGCCAAGCTCGGTAGCCTCAACGAAAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCt                                                                            <  2:3081693/148‑1 (MQ=255)
                                                                      tGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCtt                                                                           <  1:3571480/151‑1 (MQ=255)
                                                                         tCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGc                                                                        <  2:1015235/151‑1 (MQ=255)
                                                                         tCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGc                                                                        >  1:3360402/1‑151 (MQ=255)
                                                                          cAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGcc                                                                       >  2:4335359/1‑151 (MQ=255)
                                                                            aTGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGt                                                                     >  1:2573231/1‑151 (MQ=255)
                                                                              gCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTgg                                                                   <  1:2046142/151‑1 (MQ=255)
                                                                               cgaaGCGCGGTATCCTCAACGAGAAAGCGAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGt                                                                  <  2:5039793/149‑1 (MQ=255)
                                                                                 aaGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTcg                                                                <  1:598468/151‑1 (MQ=255)
                                                                                   gCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTcgcg                                                              >  2:2253773/1‑151 (MQ=255)
                                                                                     tCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGAc                                                            >  1:3080786/1‑151 (MQ=255)
                                                                                       ggTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCg                                                          >  2:1485955/1‑151 (MQ=255)
                                                                                         tATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGaa                                                        >  1:4586325/1‑151 (MQ=255)
                                                                                          aTCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAg                                                       >  1:3268634/1‑151 (MQ=255)
                                                                                             cTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCCAAGCGGAACAGGCCGGAGAGTATGGCCGCGGCTTTGCCGTACTCccgaccgagctgc                                                    >  2:2704174/1‑146 (MQ=255)
                                                                                                aaCGAGAAAGCCAGCAACAGCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGcgcc                                                 <  2:3102958/151‑1 (MQ=255)
                                                                                                   gagaAAGGCAGCAACATCACCCAGATCGTGGGAGCCATCGTCAAGGTGGCCGAGCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAACGCCAGTGAATATGGCCGCGGCTTTGCCGTGGTGGCGACCGAAGTGCGCCGCt                                              <  2:3629230/151‑1 (MQ=38)
                                                                                                     gaAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTg                                            >  2:837962/1‑151 (MQ=255)
                                                                                                      aaaGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCTATCTGCTGTCGCTCGACGCCCCCAGCGAAGCGGACTAGGCCGGTGCATGTGGCCGCGCCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTgg                                           <  2:4560357/151‑1 (MQ=255)
                                                                                                      aaaGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTgg                                           <  2:1818356/151‑1 (MQ=255)
                                                                                                      aaaGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTgg                                           >  1:4145288/1‑151 (MQ=255)
                                                                                                       aaGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGc                                          >  2:2614969/1‑151 (MQ=255)
                                                                                                           cAGCAACATCACCCAGATTGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGAc                                      >  1:526906/1‑151 (MQ=255)
                                                                                                            aGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGAcc                                     <  1:2613988/151‑1 (MQ=255)
                                                                                                            aGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGAcc                                     <  2:680738/151‑1 (MQ=255)
                                                                                                             gCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCa                                    >  2:1675214/1‑151 (MQ=255)
                                                                                                                 cATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGAcc                                >  1:2413663/1‑151 (MQ=255)
                                                                                                                        cAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTCGTCGCGACCGAAGTGCGCCGCTTGGTCGACCAGGCCGCCGtcg                         >  2:4170559/1‑149 (MQ=255)
                                                                                                                             ggtggtAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGACGCGGAAAAGGCCGGCGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCCGCCCGCCGTGGCCAcc                    >  2:873091/1‑151 (MQ=255)
                                                                                                                              gtggtAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCt                   >  2:3206785/1‑151 (MQ=255)
                                                                                                                                ggtAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTAc                 >  2:3475353/1‑151 (MQ=255)
                                                                                                                                ggtAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTAc                 >  1:3320561/1‑151 (MQ=255)
                                                                                                                                 gtAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACg                >  1:1906591/1‑151 (MQ=255)
                                                                                                                                  tAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGa               <  1:1647219/151‑1 (MQ=255)
                                                                                                                                   aaCCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGAc              >  2:44560/1‑151 (MQ=255)
                                                                                                                                   aaCCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGAc              <  2:2066734/151‑1 (MQ=255)
                                                                                                                                    aCCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACa             >  2:612607/1‑151 (MQ=255)
                                                                                                                                    aCCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACa             <  1:2883916/151‑1 (MQ=255)
                                                                                                                                    aCCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACa             <  2:3570652/151‑1 (MQ=255)
                                                                                                                                      cATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACCTc           >  2:3357545/1‑151 (MQ=255)
                                                                                                                                         cGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATTGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACAGCCGTTGCCACCTATGACACCgtg        >  2:2281950/1‑149 (MQ=255)
                                                                                                                                         cGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAg        <  1:44560/151‑1 (MQ=255)
                                                                                                                                          gTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGc       >  1:4094011/1‑151 (MQ=255)
                                                                                                                                             aaGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCaaa    >  1:3551401/1‑151 (MQ=255)
                                                                                                                                              aGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCAAAt   <  1:1316145/151‑1 (MQ=255)
                                                                                                                                               ggTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCAAATg  <  1:1271423/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCTGGCTCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTACCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCAAATG  >  CP009974/3400263‑3400556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑