| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,756,668 | C→G | intergenic (+550/+90) | RPPX_16775 → / ← RPPX_16780 | hypothetical protein/phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,756,668 | 0 | C | G | 83.0% | 805.2 / 159.8 | 336 | intergenic (+550/+90) | RPPX_16775/RPPX_16780 | hypothetical protein/phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Reads supporting (aligned to +/- strand): ref base C (21/36); new base G (162/116); total (184/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.48e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.94e-01 | |||||||||||
Only 100 of 339 total aligned reads displayed.
AAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACTGA > CP009974/3756519‑3756815 | aaaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCCCCCTCCGCAAGGCCt > 1:1257704/1‑151 (MQ=255) aaaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCCAGGCCt > 1:3985581/1‑151 (MQ=255) aCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCCCCGCAAGGCCTgc > 1:1505152/1‑151 (MQ=255) cGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTgcgc > 1:3238467/1‑151 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCCAGGCCTGCGCt > 1:941027/1‑151 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTgcgcc > 1:4166026/1‑150 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCt > 1:4051696/1‑151 (MQ=255) gTCGCCTCCCCTCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCGCGCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCt < 1:3482628/151‑1 (MQ=14) gCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGCCGCCTCACCGCTTGACGGGCATCCCTGCCCGTCCTCTCCCTCCGCCAGGCCTGCGCTCCGc > 2:4054508/1‑151 (MQ=14) tCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGCGCACGCGCTGCAGGCCCCATCCATGGGGCCTTAGCGCTTGACGGGCATCCATGCCCGGCATCTCCCTCCGCAAGGCCTGCgcccgcccc > 1:2723713/1‑150 (MQ=14) tCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCGTCCATGCCCGTCATCTCCCTCCGCCGGGCCTGCGCTCGGcct > 2:2223634/1‑151 (MQ=255) aacatcagCCGGCTACTACGCGGCGCGCCAGGGTCCCCTCGCTCCGGCCTTGCTCACGGGAACACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTAATCTACCTCCGCAAGGCCTGCGCTCGGcctc < 1:1442062/149‑1 (MQ=14) catcatCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGcctcct < 2:5178384/151‑1 (MQ=255) catcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGaa > 1:3694872/1‑151 (MQ=255) cGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCg > 1:4893811/1‑151 (MQ=255) cGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCg < 1:4254420/151‑1 (MQ=255) cccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAAt > 1:4100234/1‑151 (MQ=255) ccTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATc < 1:1913022/151‑1 (MQ=255) cTACGCTGCTCTCCGGGTTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCt < 1:3551813/151‑1 (MQ=255) cTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCt < 1:4818844/151‑1 (MQ=255) tACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTg > 2:1142130/1‑151 (MQ=255) cGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCg < 1:720121/151‑1 (MQ=255) gCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCTCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTTGCCATATGCGt > 1:2882024/1‑151 (MQ=14) cTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTc < 2:4501012/151‑1 (MQ=255) cTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTc > 1:5393243/1‑151 (MQ=255) tGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGTAGTCGCAATTTGCGTcc > 1:2074964/1‑150 (MQ=255) cgcTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCACCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCgg < 1:328640/124‑1 (MQ=14) gcTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATTCCCGTCTTCTTCCTCCGCCAGGCCTGCGCTCGGTCTCCTGAAGTCGCAATCTGcttaccct > 1:380520/1‑144 (MQ=11) cTCCGGGGTCCCCGCGCGCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTg < 2:2953327/151‑1 (MQ=255) cGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGAc < 1:1357196/151‑1 (MQ=255) ggTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGAAGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCACAATCTGCGTCGCCTGAACTAc > 1:2999630/1‑151 (MQ=11) ggTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCACAGCGCTTGACGGGCATCCATGCCCGGCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGGAGTCGCAAGCTGCGTCGCGTGAGCTAc > 2:1510309/1‑151 (MQ=11) tCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACcg < 1:3143696/151‑1 (MQ=255) tCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCCCAGCGCTTGCCGGGCATCCCTGCCCAGCATCTCCCTCCGCAAGGCCTGCGCTCGGCACTCTGCACTCGCCAACTTCGTCGCCTGGACTGCcg > 2:4301842/1‑151 (MQ=11) ccccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAACTCGCGATCTCCGTCGCCTGAACTACcgc > 2:883254/1‑151 (MQ=255) ccccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgc < 2:3168325/151‑1 (MQ=255) cccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGTGCCCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAAATACcgcg > 2:4182222/1‑151 (MQ=14) ccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgcgc > 1:3865849/1‑151 (MQ=255) cTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcgcg < 2:1635562/151‑1 (MQ=255) tCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCgcgcgc < 2:1059828/151‑1 (MQ=255) cGCTCCGGCCTTGCTCCCGGGAGCACGCGCTTCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAAGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTAACGCGCGCt > 2:5372771/1‑151 (MQ=11) gCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGTCATCCATGCCCGTCATCTCCCTCCGCAAGTCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGCACTACCGCGCGAtt > 2:2774602/1‑151 (MQ=14) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAg > 1:4668413/1‑151 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAg < 2:3085011/151‑1 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAg > 1:1125026/1‑151 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAg < 1:4511823/151‑1 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAg < 1:2659381/151‑1 (MQ=255) gCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGc < 2:1200951/151‑1 (MQ=255) cTTGCTCTCGGGAGCACGCGCTGCAGGCCCCGTCCATTGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCaa < 2:3337388/151‑1 (MQ=255) cTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGCAGTCGCAATCTCCGTCGCCTGAACTCCCCCGCGCGTAGAAGCac > 2:3671770/1‑150 (MQ=11) tGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGa > 1:1704526/1‑151 (MQ=255) tCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCa > 2:201074/1‑151 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaa < 1:1898677/151‑1 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCAATCCATGGGGCCTCAGCGATTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaa < 2:2092315/151‑1 (MQ=255) gggAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaag > 2:2524006/1‑151 (MQ=255) aGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcga > 1:5180767/1‑151 (MQ=255) gCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTCAGAAGCAAGATCaaaagcgaa > 2:4765745/1‑151 (MQ=255) cACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaa > 1:3710137/1‑151 (MQ=255) aCGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaa > 2:2044677/1‑151 (MQ=255) aCGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCGCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACCACCGCGCGCGTAGAAGCAAGATGaaaagcgaaaa > 2:4960182/1‑151 (MQ=14) gcgcTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagc < 1:1316726/151‑1 (MQ=255) cgcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTCGAAGCAAGATCaaaagcgaacagcg > 2:5032438/1‑151 (MQ=14) gcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcga > 2:5250349/1‑151 (MQ=255) gcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCAGCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcga > 1:2577969/1‑151 (MQ=255) tGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcgaaa > 2:928944/1‑151 (MQ=255) gCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaatt < 1:2472371/151‑3 (MQ=255) gCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaatt > 2:3100834/1‑149 (MQ=255) ggCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattcgg < 2:1402658/151‑6 (MQ=17) ggCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattcgg < 2:692821/151‑6 (MQ=17) gCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattcggt < 1:1114793/151‑7 (MQ=17) gCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattcggt > 1:689663/1‑145 (MQ=255) ccatCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCa > 1:812158/4‑151 (MQ=255) catCCACGGGTCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAg < 1:2574052/149‑1 (MQ=255) atCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAgc < 1:102117/150‑1 (MQ=255) tCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAgcg > 2:1843750/1‑151 (MQ=255) ggggCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAACATCAAAAGCGAAAAGCGAAAAGCGCTCAGcgccgcc > 2:1742503/1‑150 (MQ=255) gggCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCCCGCGCCTAGAAGCAAGATCAAAAGCGAAAAGCCAAAAGCGCTCAGCGCCGCAc > 2:1462511/1‑151 (MQ=18) ccTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTg > 2:3385119/1‑151 (MQ=255) ccTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTg < 1:2115594/151‑1 (MQ=255) cAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCtt > 1:1723361/1‑151 (MQ=255) cAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCtt < 1:2424732/151‑1 (MQ=255) cgcTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAg > 2:3556036/1‑151 (MQ=255) tGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGtt < 1:2784644/151‑1 (MQ=255) aCGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTc < 1:1205757/151‑1 (MQ=255) gCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCa > 1:4297164/1‑151 (MQ=255) tCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATc > 2:5308886/1‑151 (MQ=255) tCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATc > 2:1009817/1‑151 (MQ=255) ccATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCa > 2:1968960/1‑151 (MQ=255) cATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAg > 1:3504676/1‑151 (MQ=255) aTGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAgg > 1:2277591/1‑151 (MQ=255) tGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGa > 1:4842917/1‑151 (MQ=255) gCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAgc > 1:3087947/1‑117 (MQ=255) cGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGc > 2:456002/1‑151 (MQ=255) ctccctccGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTc < 1:61303/151‑1 (MQ=255) ccTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAg > 2:1280314/1‑151 (MQ=255) tccGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCg < 1:4913413/149‑1 (MQ=255) cGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGAc > 1:5333612/1‑151 (MQ=255) cGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGAc < 2:3890076/151‑1 (MQ=255) gCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACt > 2:2387181/1‑151 (MQ=255) aaGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACTGa > 1:86823/1‑151 (MQ=255) | AAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACTGA > CP009974/3756519‑3756815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |