Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 3,756,930 A→T L392H (CTT→CAT)  RPPX_16780 ← phospho‑2‑dehydro‑3‑deoxyheptonate aldolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,756,9300AT99.6% 1004.1 / NA 268L392H (CTT→CAT) RPPX_16780phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (131/135);  minor base C (1/0);  total (133/135)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 270 total aligned reads displayed.

TTCGGCAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGAGGTTCTGCCCGGTCATCTGGATAAGGATATCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTCCACAGCACCT  >  CP009974/3756782‑3757077
                                                                                                                                                    |                                                                                                                                                   
ttCGGCAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATgg                                                                                                                                                   <  2:450764/151‑1 (MQ=255)
ttCGGCAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCCGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATgg                                                                                                                                                   <  2:722869/151‑1 (MQ=255)
  cGGCAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGat                                                                                                                                                 >  2:195560/1‑151 (MQ=255)
    gCAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGatac                                                                                                                                               <  1:132570/151‑2 (MQ=255)
    gCAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGatac                                                                                                                                               <  2:4323124/151‑2 (MQ=255)
     cAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGatacc                                                                                                                                              >  1:3985662/1‑149 (MQ=255)
      aaTCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCg                                                                                                                                             >  2:2995565/1‑151 (MQ=255)
          aGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCgg                                                                                                                                         >  1:3761265/1‑151 (MQ=255)
           ggAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACGATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGc                                                                                                                                        <  2:3524729/151‑1 (MQ=255)
            gAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCa                                                                                                                                       >  2:4427657/1‑151 (MQ=255)
             aaTGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCCTCTCGGCAGGGATACCGCCGGCag                                                                                                                                      >  1:4450651/1‑150 (MQ=255)
             aaTGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCAt                                                                                                                                      <  2:3694872/151‑1 (MQ=255)
               tGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATgg                                                                                                                                    <  1:4027233/151‑1 (MQ=255)
                gCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGc                                                                                                                                   >  1:3891291/1‑151 (MQ=255)
                     cTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGccc                                                                                                                              <  2:1616891/151‑1 (MQ=255)
                      tCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGcccc                                                                                                                             >  1:3197848/1‑150 (MQ=255)
                      tCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCt                                                                                                                             >  1:1795079/1‑151 (MQ=255)
                       ccAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTc                                                                                                                            <  1:5032438/151‑1 (MQ=255)
                          gCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGc                                                                                                                         <  1:4939413/151‑1 (MQ=255)
                          gCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGc                                                                                                                         <  2:2304280/151‑1 (MQ=255)
                            gACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCt                                                                                                                       >  1:2026018/1‑151 (MQ=255)
                              cTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTgg                                                                                                                     <  2:4911807/151‑1 (MQ=255)
                                 aTCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGgtgt                                                                                                                  <  2:2831064/151‑1 (MQ=255)
                                  tCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTa                                                                                                                 <  2:1787268/151‑1 (MQ=255)
                                  tCGGCATTCAGCCGCGGATCACAATGGGTGGGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTa                                                                                                                 <  2:380520/151‑1 (MQ=255)
                                   gggCAGTCATCCGCGGATCACGATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTAc                                                                                                                <  2:3647680/150‑1 (MQ=255)
                                   cGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTAc                                                                                                                >  1:3097992/1‑151 (MQ=255)
                                       aTTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTgg                                                                                                            >  1:3463423/1‑151 (MQ=255)
                                        ttCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGga                                                                                                           <  1:2320438/151‑1 (MQ=255)
                                         tCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTggca                                                                                                          >  1:4710433/1‑149 (MQ=255)
                                         tCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGgaa                                                                                                          <  1:74416/151‑1 (MQ=255)
                                         tCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGgaa                                                                                                          <  2:777078/151‑1 (MQ=255)
                                            tCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGATGTTCTGCCCAGCCATCTCGCTATGGATACCTCCCGCACGGCTGCCCTCGGCCTCGCTTACTTCgaagca                                                                                                       >  2:3235822/1‑149 (MQ=255)
                                            tCCGCGGATCACAATGGGTGAGATACCGGACAGACGACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGgaagaa                                                                                                       <  2:1475168/151‑1 (MQ=255)
                                              cgcgGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACt                                                                                                     <  1:1062253/151‑1 (MQ=255)
                                               gcgGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTg                                                                                                    <  2:1715740/151‑1 (MQ=255)
                                                   aTCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTc                                                                                                >  2:5388356/1‑151 (MQ=255)
                                                   aTCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTc                                                                                                >  2:2553405/1‑151 (MQ=255)
                                                        aaTGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTTACCTc                                                                                           >  1:1396573/1‑151 (MQ=255)
                                                        aaTGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTc                                                                                           <  1:1843750/151‑1 (MQ=255)
                                                         aTGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCa                                                                                          <  2:3124664/151‑1 (MQ=255)
                                                          tGGGTGTTATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCAt                                                                                         >  1:4567397/1‑151 (MQ=255)
                                                          tGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCAt                                                                                         <  1:3365013/151‑1 (MQ=255)
                                                          tGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCAt                                                                                         >  1:2153856/1‑151 (MQ=255)
                                                             gtgtGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCCTCCa                                                                                      >  1:5288720/1‑151 (MQ=255)
                                                                tgATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGaa                                                                                   <  1:2995565/151‑1 (MQ=255)
                                                                tgATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGaa                                                                                   <  2:3071648/151‑1 (MQ=255)
                                                                  atcccGGTCAGACAGCGCATCCTCGGTGATCGGGCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATc                                                                                 <  2:3969295/148‑1 (MQ=255)
                                                                    aCCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTg                                                                               <  2:3919140/151‑1 (MQ=255)
                                                                           aGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCaaaa                                                                        <  2:3778798/151‑1 (MQ=255)
                                                                            gACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAAt                                                                       <  2:5415985/151‑1 (MQ=255)
                                                                             ccAACGCACCCTCGGTGATCGGCCGGGCGCCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATc                                                                      <  1:3671770/150‑1 (MQ=255)
                                                                             aCAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATc                                                                      <  1:3233517/151‑1 (MQ=255)
                                                                             aCAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATc                                                                      <  2:583700/151‑1 (MQ=255)
                                                                              cAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATcg                                                                     >  2:4783108/1‑151 (MQ=255)
                                                                               aaCGCATCCTTGGTGATCGGCCGGGCACCCCCGATGCATTCGGTGACGTTCTGCTTAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCCCCTCATCCAGAATCTGCGCAAAATcgc                                                                    <  2:4109715/151‑1 (MQ=255)
                                                                                 cGCATGCTCGGTTGTAGGCCGGGCACCGCCGATGCATTCGGGGGGGTTGTGCCCAGGCGGATCGATATGGATACCGCCGGCATGGCGGCGATCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCGTCCAGAATCTGCGCAACATCGCgg                                                                  <  2:4999743/151‑1 (MQ=255)
                                                                                  gCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCggg                                                                 <  2:1861918/151‑1 (MQ=255)
                                                                                        tCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGt                                                           >  2:3994248/1‑151 (MQ=255)
                                                                                         cGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTa                                                          <  2:425466/151‑1 (MQ=255)
                                                                                            tGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAAcc                                                       >  1:863266/1‑151 (MQ=255)
                                                                                            tGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAAcc                                                       <  1:1607753/151‑1 (MQ=255)
                                                                                            tGATCGGCCGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAAcc                                                       <  1:4301842/151‑1 (MQ=255)
                                                                                                cGGCTGGGCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCgctg                                                   >  2:4475308/1‑151 (MQ=255)
                                                                                                     gggCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGCATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGc                                              >  2:2238347/1‑151 (MQ=255)
                                                                                                       gCACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCt                                            >  2:2106033/1‑151 (MQ=255)
                                                                                                        cACCGCCGGTGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCtt                                           <  2:86823/151‑1 (MQ=255)
                                                                                                        cACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCtt                                           <  2:2577969/151‑1 (MQ=255)
                                                                                                        cACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCtt                                           >  2:1208138/1‑151 (MQ=255)
                                                                                                        cACCGCCGATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTATTGTAACCGCTGCTGGCCtt                                           >  1:1159768/1‑151 (MQ=255)
                                                                                                          ccgccgATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGa                                         <  2:4841495/151‑1 (MQ=255)
                                                                                                           cgccgATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGAt                                        <  1:1009817/151‑1 (MQ=255)
                                                                                                           cgccgATGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGAt                                        <  1:5308886/151‑1 (MQ=255)
                                                                                                                aTGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGgtgt                                   >  2:5183979/1‑151 (MQ=255)
                                                                                                                aTGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGgtgt                                   >  1:3110672/1‑151 (MQ=255)
                                                                                                                aTGCATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGgtgt                                   >  1:612662/1‑151 (MQ=255)
                                                                                                                   cATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGc                                >  1:1574275/1‑151 (MQ=255)
                                                                                                                   cATTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGc                                <  1:1427780/151‑1 (MQ=255)
                                                                                                                    aTTCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGcc                               >  2:1519888/1‑151 (MQ=255)
                                                                                                                      tCGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGt                             <  2:2397576/151‑1 (MQ=255)
                                                                                                                       cGGTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTg                            >  1:2888181/1‑151 (MQ=255)
                                                                                                                        ggTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGc                           >  1:5348876/1‑151 (MQ=255)
                                                                                                                        ggTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGc                           >  1:1727430/1‑151 (MQ=255)
                                                                                                                        ggTGACGTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGc                           >  1:1350112/1‑151 (MQ=255)
                                                                                                                              gTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGCTGGTGTTGCCGTGCatcgga                     >  2:2869155/1‑151 (MQ=255)
                                                                                                                              gTTCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGAGGGTGTTGCCGTGCatcgga                     <  1:2683389/151‑1 (MQ=255)
                                                                                                                               ttCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCatcggat                    <  2:3736898/151‑1 (MQ=255)
                                                                                                                                tgtGCCCAGTGATCTCGATATGGATGCCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGGACTGCTTCACCTCATCCAGAATCTGCGCAAATTCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCatcggatc                   <  2:4295187/149‑1 (MQ=255)
                                                                                                                                tCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCatcggatc                   <  1:4153942/151‑1 (MQ=255)
                                                                                                                                tCTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCatcggatc                   <  1:4889099/151‑1 (MQ=255)
                                                                                                                                 cTGCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCatcggatcg                  <  2:963638/151‑1 (MQ=255)
                                                                                                                                   gCCCAGTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCAtcggatcgga                <  1:3174936/151‑1 (MQ=255)
                                                                                                                                     ccagTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAAc              >  1:2478331/4‑151 (MQ=255)
                                                                                                                                       agTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTc            <  2:1902446/150‑1 (MQ=255)
                                                                                                                                        ggcgtctcGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTcc           <  1:2207029/147‑1 (MQ=255)
                                                                                                                                        gTCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTcc           <  2:2700849/151‑1 (MQ=255)
                                                                                                                                         tCATCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTccc          >  1:4219151/1‑150 (MQ=255)
                                                                                                                                           aTCTCGATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTCcaca        >  1:735376/1‑151 (MQ=255)
                                                                                                                                             ctcgATATGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTCCACAGc      >  1:5013176/4‑151 (MQ=255)
                                                                                                                                                 atatGGATACCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTCCACAGCACCt  >  2:2176030/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TTCGGCAATCAGGAATGCCAACTCCAGCGACTGATCGGCATTCATCCGCGGATCACAATGGGTGTGATACCGGTCAGACAACGCATCCTCGGTGATCGGCCGGGCACCGCCGATGCATTCGGTGAGGTTCTGCCCGGTCATCTGGATAAGGATATCGCCGGCATGGCTGCCCTCGGCCTGGTGTACTTGGAAGAACTGCTTCACCTCATCCAGAATCTGCGCAAAATCGCGGGTCTTGTAACCGCTGCTGGCCTTGATGGTGTTGCCGTGCATCGGATCGGAACTCCACAGCACCT  >  CP009974/3756782‑3757077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: