Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 4,030,927 G→A intergenic (+69/‑715) RPPX_17905 → / → RPPX_17915 23S rRNA methyltransferase/sulfurtransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099744,030,9270GA98.1% 545.2 / NA 160intergenic (+69/‑715)RPPX_17905/RPPX_1791523S rRNA methyltransferase/sulfurtransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (67/90);  minor base C (1/2);  total (68/92)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 160 total aligned reads displayed.

CGATTGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCT  >  CP009974/4030779‑4031048
                                                                                                                                                    |                                                                                                                          
cGATTGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATa                                                                                                                          >  2:388280/1‑151 (MQ=255)
 gATTGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAg                                                                                                                         <  1:738031/151‑1 (MQ=255)
  aTTGCCTGCAAGCAGCTGTACCACGACCGTAAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGt                                                                                                                        >  1:2294955/1‑151 (MQ=255)
   ttGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGtt                                                                                                                       <  1:4076652/151‑1 (MQ=255)
   ttGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGtt                                                                                                                       <  1:4471390/151‑1 (MQ=255)
   ttGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGtt                                                                                                                       >  2:4431200/1‑151 (MQ=255)
    tGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTc                                                                                                                      <  2:2728388/151‑1 (MQ=255)
     gCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTCCTAAGCGCGCGATAGTCCa                                                                                                                     >  1:4111059/1‑151 (MQ=255)
      ccTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAg                                                                                                                    <  1:4292481/151‑1 (MQ=255)
      ccTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAg                                                                                                                    <  2:232834/151‑1 (MQ=255)
         gCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGATCGACTTGAAGCCCCGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCg                                                                                                                 <  2:5201630/151‑1 (MQ=255)
           aaGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGAc                                                                                                               <  1:138483/151‑1 (MQ=255)
             gcagcTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGc                                                                                                             <  1:2048089/151‑1 (MQ=255)
                 cTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGAt                                                                                                         <  1:2294149/151‑1 (MQ=255)
                  tGTACCACGACCGTGAAGAAGTAACGTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGAtt                                                                                                        <  1:4006951/151‑1 (MQ=255)
                  tGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGAtt                                                                                                        <  2:843027/151‑1 (MQ=255)
                     aCCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCg                                                                                                     >  1:1985109/1‑151 (MQ=255)
                     aCCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCg                                                                                                     >  1:2551744/1‑151 (MQ=255)
                        aCGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACt                                                                                                  <  2:638520/151‑1 (MQ=255)
                          gACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTc                                                                                                <  2:2445131/151‑1 (MQ=255)
                          gACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTc                                                                                                >  2:620332/1‑151 (MQ=255)
                           aCCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCa                                                                                               >  2:1978442/1‑151 (MQ=255)
                            ccGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCag                                                                                              >  1:1942533/1‑151 (MQ=255)
                             cGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGACGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCagg                                                                                             >  2:4984587/1‑151 (MQ=255)
                              gTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCagga                                                                                            <  1:1021588/151‑1 (MQ=255)
                                gaagaaGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCaggagg                                                                                          <  1:5099177/151‑1 (MQ=255)
                                 aagaagTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGc                                                                                         <  1:5149727/151‑1 (MQ=255)
                                    aagTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGa                                                                                      <  1:5420715/151‑1 (MQ=255)
                                     agTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAg                                                                                     >  1:3559732/1‑151 (MQ=255)
                                       tAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTg                                                                                   <  1:619216/151‑1 (MQ=255)
                                         aCCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCa                                                                                 <  1:952883/151‑1 (MQ=255)
                                          ccTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGCTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAg                                                                                <  1:4079945/151‑1 (MQ=255)
                                          ccTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAg                                                                                <  1:1112304/151‑1 (MQ=255)
                                            tGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAggg                                                                              <  1:4206801/151‑1 (MQ=255)
                                             gCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGc                                                                             <  1:757528/151‑1 (MQ=255)
                                              ccACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCt                                                                            <  2:4054371/151‑1 (MQ=255)
                                                aCCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTg                                                                          >  2:5342047/1‑151 (MQ=255)
                                                aCCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTg                                                                          >  1:3905956/1‑151 (MQ=255)
                                                     cggcggCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAg                                                                     >  1:2030559/1‑151 (MQ=255)
                                                      ggcggcTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACACAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAgg                                                                    >  1:3681190/1‑151 (MQ=255)
                                                       gcggcTCGACTTGAAGCCATGCTGAAGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGAAGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAggg                                                                   <  1:3694702/151‑1 (MQ=255)
                                                        cggcTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAg                                                                                                           >  1:1124645/1‑110 (MQ=255)
                                                        cggcTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAg                                                                                                           >  1:1125301/1‑110 (MQ=255)
                                                        cggcTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAg                                                                                                           <  2:1125301/110‑1 (MQ=255)
                                                         ggcTCGACTTGAAGCCCCGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAg                                                                 <  2:1864818/151‑1 (MQ=255)
                                                           cTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGt                                                               <  1:2556878/151‑1 (MQ=255)
                                                           cTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGt                                                               <  1:2896224/151‑1 (MQ=255)
                                                           cTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGt                                                               <  1:3793700/151‑1 (MQ=255)
                                                            tCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTg                                                              >  1:3292229/1‑151 (MQ=255)
                                                             cGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGa                                                             <  2:5331885/151‑1 (MQ=255)
                                                             cGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGa                                                             >  2:1636595/1‑151 (MQ=255)
                                                              gACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGAc                                                            <  1:4966107/151‑1 (MQ=255)
                                                               aCTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAggcgccg                                                           >  2:4092809/1‑146 (MQ=255)
                                                               aCTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACg                                                           >  2:4758038/1‑151 (MQ=255)
                                                               aCTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACg                                                           <  2:281635/151‑1 (MQ=255)
                                                                cTTGAAGCCACGCTGCGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACgg                                                          <  1:4033439/151‑1 (MQ=255)
                                                                  tGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGc                                                        <  1:2691560/151‑1 (MQ=255)
                                                                   gAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCa                                                       >  2:2838263/1‑151 (MQ=255)
                                                                    aaGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCAt                                                      <  1:4705310/151‑1 (MQ=255)
                                                                        cACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGAt                                                  >  1:3454556/1‑151 (MQ=255)
                                                                          cGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGTTTGCGAATTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGc                                                >  1:1814768/1‑151 (MQ=255)
                                                                           gCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGcc                                               >  2:3019652/1‑151 (MQ=255)
                                                                            cTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGccc                                              >  2:247064/1‑151 (MQ=255)
                                                                             tGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCg                                             <  1:3218101/151‑1 (MQ=255)
                                                                              gAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGt                                            <  2:3952338/151‑1 (MQ=255)
                                                                              gAGGCCAGCACGGCGGTCTGCGTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGAGAGTTCAGGCGGCGCAGGTTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGt                                            <  2:2633545/151‑1 (MQ=14)
                                                                               aGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTc                                           <  1:5342047/151‑1 (MQ=255)
                                                                               aGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTc                                           >  2:3996750/1‑151 (MQ=255)
                                                                               aGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATCCATGCCCGTc                                           <  2:1544430/151‑1 (MQ=255)
                                                                                ggCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCa                                          <  1:3768977/151‑1 (MQ=255)
                                                                                  ccaccccgtcgtTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTGTTGCTTCTCAGCGCGCGCTAGTTCGGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAg                                        <  1:4086501/145‑1 (MQ=11)
                                                                                  ccAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAg                                        <  1:3601170/151‑1 (MQ=255)
                                                                                    aGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAgcg                                      <  1:1201751/151‑1 (MQ=255)
                                                                                    aGCACGTCGTCCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAgcg                                      <  1:5008321/151‑1 (MQ=255)
                                                                                     gCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAgcgc                                     >  1:4238876/1‑151 (MQ=255)
                                                                                     gCACGTCGTACTGCTTCTGCTTCTGCTTCTGATTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGCCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAgcgc                                     <  2:4259249/151‑1 (MQ=255)
                                                                                      cACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCt                                    >  2:4417489/1‑151 (MQ=255)
                                                                                       aCGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTg                                   >  1:2054707/1‑151 (MQ=255)
                                                                                        cgtcgtTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgg                                  <  1:1240874/151‑2 (MQ=255)
                                                                                        cgtcgtTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgg                                  <  2:5117976/151‑2 (MQ=255)
                                                                                           cgtTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgggcc                               >  2:4236483/1‑147 (MQ=255)
                                                                                            gtTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGccc                             >  1:3106084/1‑151 (MQ=255)
                                                                                            gtTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGccc                             >  2:270408/1‑151 (MQ=16)
                                                                                             ttctgcttctgcttctgcttctgcttctgcttctgcTTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGcccc                            <  1:852286/151‑1 (MQ=255)
                                                                                              tctgcttctgcttctgcttctgcttctgcttctgctTTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCa                           <  2:5059353/151‑1 (MQ=16)
                                                                                               ttgcttcggattctgcttctgcttctgcttctgcttTTGCTTCTCAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑g                         <  1:2073309/150‑1 (MQ=11)
                                                                                                tgcttctgcttctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGCCGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑gg                        >  2:2142805/1‑151 (MQ=255)
                                                                                                 gcttctgcttctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGa                       >  1:1763211/1‑151 (MQ=16)
                                                                                                 gctgctgcttctgcttctgcttctgcttctgcttTTGCTTCTCAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGACGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGa                       <  2:3481242/151‑1 (MQ=11)
                                                                                                   ttctgcttctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATg                     >  2:1052902/1‑151 (MQ=16)
                                                                                                   ttctgcttctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATg                     <  2:3049066/151‑1 (MQ=16)
                                                                                                     ctgcttctgcttctgcttctgcttctgcttTTGCTTCTAGGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATggg                   <  1:5295473/151‑1 (MQ=255)
                                                                                                     ctgcttctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATggg                   >  1:323683/1‑151 (MQ=255)
                                                                                                     ctgcttctgcttcggcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATggg                   <  1:3858899/151‑1 (MQ=255)
                                                                                                       gcttctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGc                 <  2:1763211/151‑1 (MQ=16)
                                                                                                        cttctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGcc                >  2:317539/1‑151 (MQ=255)
                                                                                                         ttcggcttctgcttcggcttctgcttTTGCGTCAACGCGCGCGATGGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGCGCGCAGGGCTGGCGAAGGGGGGTGACGGGCTTTGATGCCCGTCACGCGCTGAGGACCCATGGATGGGGc                 <  2:2858868/151‑1 (MQ=11)
                                                                                                          tctgcttctgcttctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCtg              >  2:3273285/1‑150 (MQ=16)
                                                                                                               ttctgctgcggcttcggcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCtgcagcg         <  2:559177/151‑7 (MQ=1)
                                                                                                                      tctgcttctgcttTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCt  >  1:399776/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                          
CGATTGCCTGCAAGCAGCTGTACCACGACCGTGAAGAAGTAACCTGCCACCTGCGGCGGCTCGACTTGAAGCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTTTGCTTCTAAGCGCGCGGTAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGTGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCT  >  CP009974/4030779‑4031048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑