BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	4,540,460	C→T	R458R (CGG→CGA)	RPPX_20280 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	4,540,460	0	C	T	100.0%	664.2 / NA	204	R458R (CGG→CGA)	RPPX_20280	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (100/104); total (100/104)

Only 100 of 204 total aligned reads displayed.

CCCCGCCAATCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAGGGGTTATCGATG  >  CP009974/4540313‑4540604

ccccGCCAATCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCgg                                                                                                                                               >  1:1512660/1‑151 (MQ=255)

  ccGCCAATCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCgggc                                                                                                                                             >  2:2090273/1‑149 (MQ=255)

    gCCAATCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCAt                                                                                                                                           >  2:4216506/1‑151 (MQ=255)

     ccAATCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATg                                                                                                                                          <  1:4642537/151‑1 (MQ=255)

       aaTCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGAt                                                                                                                                        <  2:976565/151‑1 (MQ=255)

        aTCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATc                                                                                                                                       <  1:5219706/151‑1 (MQ=255)

         tCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCt                                                                                                                                      <  1:4683221/151‑1 (MQ=255)

         tCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCGGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTGTGAAGCGTCGGGCATGATCt                                                                                                                                      >  2:252321/1‑151 (MQ=255)

            cTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCg                                                                                                                                   <  1:2589090/151‑1 (MQ=255)

             tCGATCACGTTGTCGCTGGCGCCGCACAAGGAGCCGTTGGCGTCGGCTTTGTCCTTGAACCGGTTGATCGGCGCCAAGGCGGTGTAAAGCGCGCTGCCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGACGCGTCGGTCATGATCTTCgc                                                                                                                                  <  2:4661029/151‑2 (MQ=14)

              cGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGt                                                                                                                                 <  2:1736704/151‑1 (MQ=255)

                  cACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCg                                                                                                                             <  1:1349629/151‑1 (MQ=255)

                  cACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCg                                                                                                                             <  1:4643083/151‑1 (MQ=255)

                     gTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGgt                                                                                                                          <  2:2255090/151‑1 (MQ=255)

                       tGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGgtgt                                                                                                                        >  1:5340047/1‑151 (MQ=255)

                        gTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTc                                                                                                                       <  2:2885459/151‑1 (MQ=255)

                        gTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTc                                                                                                                       <  1:684299/151‑1 (MQ=255)

                         tCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGGCATGATCTTCGGTGCCGGGTGTCg                                                                                                                      >  2:3036839/1‑151 (MQ=255)

                           gCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGc                                                                                                                    >  1:364496/1‑151 (MQ=255)

                            cTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCt                                                                                                                   <  1:3490455/151‑1 (MQ=255)

                             tGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTg                                                                                                                  <  2:4782594/151‑1 (MQ=255)

                             tGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTg                                                                                                                  >  1:4354861/1‑151 (MQ=255)

                               gcgcCGAACAAGGAGCCGATGGCGTCGGCTTGGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGc                                                                                                                <  2:3730866/151‑1 (MQ=255)

                                cgcCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGGGTCGGCTGGcc                                                                                                               >  1:3130833/1‑151 (MQ=255)

                                 gcCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGccc                                                                                                              >  2:3916538/1‑151 (MQ=255)

                                    gAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCAtt                                                                                                           >  2:2176292/1‑151 (MQ=255)

                                     aaCAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCACTg                                                                                                          >  2:2673496/1‑151 (MQ=255)

                                      aCAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTgg                                                                                                         >  1:572517/1‑151 (MQ=255)

                                      aCAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTgg                                                                                                         >  1:353558/1‑151 (MQ=255)

                                      aCAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGCGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGTCGTTTGTAGCGTCGGTCATGATCTTTGGTGCCGGGTGCCGGCTGGGCCAtttg                                                                                                         >  2:2286852/1‑149 (MQ=14)

                                        aaGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGt                                                                                                       >  2:1983320/1‑151 (MQ=255)

                                        aaGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGt                                                                                                       >  2:4111338/1‑151 (MQ=255)

                                          ggAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGa                                                                                                     <  1:2703569/151‑1 (MQ=255)

                                          ggAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGa                                                                                                     <  1:939508/151‑1 (MQ=255)

                                           gAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGaa                                                                                                    <  1:2801908/151‑1 (MQ=255)

                                              ccGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCTAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCa                                                                                                 <  2:1574880/151‑1 (MQ=255)

                                                 aTGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCa                                                                                              <  2:273959/151‑1 (MQ=255)

                                                 aTGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCa                                                                                              >  2:2464382/1‑151 (MQ=255)

                                                 aTGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGCCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTGCGGTGCCGGGTGTCGGCTGGCCCATTGCGCGAAtttgca                                                                                              >  2:1514638/1‑146 (MQ=11)

                                                 aTGGCGTCGGCTTCGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCCGTCGTGCTGGTCCAGCCACTGCTCCAGGCGCTTGACGCGTCGGTCATGATCTCCGGCGCCCCGTGTCGGCGGGCCCACTGGCCGAACCAGcc                                                                                              >  2:4241508/1‑150 (MQ=11)

                                                  tGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCaa                                                                                             >  2:4813858/1‑151 (MQ=255)

                                                    gCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACg                                                                                           >  2:1166834/1‑151 (MQ=18)

                                                     cGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGc                                                                                          <  1:1722239/151‑1 (MQ=16)

                                                          gCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTg                                                                                     <  1:1885645/151‑1 (MQ=12)

                                                             ttGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTgaga                                                                                  <  1:3221899/151‑1 (MQ=17)

                                                             ttGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTgaga                                                                                  <  2:4528939/151‑1 (MQ=17)

                                                              tGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGAt                                                                                 <  1:3316140/151‑1 (MQ=14)

                                                                tCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGAttt                                                                               <  2:1239437/151‑1 (MQ=12)

                                                                   ttGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCa                                                                            >  2:361537/1‑151 (MQ=14)

                                                                     gAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGa                                                                          <  2:4294879/151‑1 (MQ=12)

                                                                      aaCGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGAc                                                                         >  1:3976801/1‑151 (MQ=9)

                                                                      aaCGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGAc                                                                         >  2:5310159/1‑151 (MQ=9)

                                                                      aaCGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGAc                                                                         >  2:5214348/1‑151 (MQ=14)

                                                                         gggTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACcgc                                                                      >  1:3614122/1‑151 (MQ=16)

                                                                           gTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCgcgg                                                                    >  1:415688/1‑151 (MQ=21)

                                                                            ttGAACGACGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCgcggg                                                                   <  1:5399853/151‑1 (MQ=255)

                                                                             tGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCgcgggc                                                                  <  2:3403058/151‑1 (MQ=255)

                                                                             tGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCgcgggc                                                                  <  1:1796850/151‑1 (MQ=255)

                                                                              gAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCgcgggcg                                                                 >  2:4926873/1‑151 (MQ=21)

                                                                                    cgcCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTg                                                           <  2:3079400/151‑1 (MQ=255)

                                                                                     gcCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCa                                                                                        <  1:1077726/121‑1 (MQ=16)

                                                                                     gcCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGc                                                          >  2:788749/1‑151 (MQ=19)

                                                                                       cAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGt                                                        >  2:1795324/1‑151 (MQ=19)

                                                                                        aaGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGtt                                                       <  1:4480465/151‑1 (MQ=255)

                                                                                        aaGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGtt                                                       >  2:2863366/1‑151 (MQ=21)

                                                                                         aGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTc                                                      >  2:1352204/1‑151 (MQ=18)

                                                                                           gCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGt                                                    <  2:1732900/151‑1 (MQ=21)

                                                                                            cGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCCGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTc                                                   <  1:3089542/151‑1 (MQ=255)

                                                                                             ggTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCTTTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCa                                                  <  2:2323170/151‑1 (MQ=255)

                                                                                              gtgtAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCAc                                                 >  2:3821059/1‑151 (MQ=25)

                                                                                                  aaaGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTc                                             <  2:4524685/151‑1 (MQ=255)

                                                                                                    aGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCCGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGCCGt                                           >  2:3963308/1‑151 (MQ=255)

                                                                                                     gCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTa                                          >  1:3844877/1‑151 (MQ=255)

                                                                                                       gggCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAAc                                        <  1:5076761/151‑1 (MQ=255)

                                                                                                        ggCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACa                                       >  1:498129/1‑151 (MQ=255)

                                                                                                         gCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAg                                      >  1:2229387/1‑151 (MQ=25)

                                                                                                           tGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGc                                    >  1:2565043/1‑151 (MQ=255)

                                                                                                              cGTGCTGGTCCAGCCATTGCTCCAGGCGATTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGGGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCaa                                 >  2:3224539/1‑151 (MQ=255)

                                                                                                                tGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAgg                               <  1:1889432/151‑1 (MQ=255)

                                                                                                                ggCTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAgg                               <  1:4844000/150‑1 (MQ=255)

                                                                                                                  cTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAggcg                             <  1:2275496/151‑1 (MQ=255)

                                                                                                                  cTGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAggcg                             >  1:2167223/1‑151 (MQ=255)

                                                                                                                   tGGTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAggcgg                            <  2:5409708/151‑1 (MQ=255)

                                                                                                                     gTCCAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCt                          <  2:5170665/151‑1 (MQ=255)

                                                                                                                       ccAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGc                        >  1:1145386/1‑151 (MQ=255)

                                                                                                                        cAGCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGcc                       <  1:2847827/151‑1 (MQ=255)

                                                                                                                          gCCATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAg                     >  2:5255765/1‑151 (MQ=255)

                                                                                                                            cATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGc                   >  2:314060/1‑151 (MQ=255)

                                                                                                                            cATTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGc                   >  2:3004788/1‑151 (MQ=255)

                                                                                                                             aTTGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGGGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCt                  >  1:915992/1‑151 (MQ=255)

                                                                                                                               tGCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGc                        <  2:93171/143‑1 (MQ=255)

                                                                                                                                gCTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTa               <  1:1704084/151‑1 (MQ=255)

                                                                                                                                 cTCCAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAg              >  1:4719288/1‑151 (MQ=25)

                                                                                                                                   ccAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAggg            >  2:836943/1‑151 (MQ=255)

                                                                                                                                    cAGGCGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAgggg           <  1:973834/151‑1 (MQ=255)

                                                                                                                                     cggCGTTTGCAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAAGCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAGGGGt          <  2:1006869/150‑1 (MQ=255)

                                                                                                                                        cGTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAGGGGTTAt       <  1:207060/151‑1 (MQ=255)

                                                                                                                                         gTTTGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAGGGGTTATc      >  1:1560991/1‑151 (MQ=255)

                                                                                                                                          tttGAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAGGGGTTATCg     >  1:4013342/1‑151 (MQ=255)

                                                                                                                                             gAAGCGTCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAGGGGTTATCGAtg  >  2:2105416/1‑151 (MQ=255)

CCCCGCCAATCCCTCGATCACGTTGTCGCTGGCGCCGAACAAGGAGCCGATGGCGTCGGCTTTGTCCTTGAACGGGTTGAACGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCGGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCACGGTCGTAACAGGCCAAGGCGGCTGCCAGGCTGTAGGGGTTATCGATG  >  CP009974/4540313‑4540604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`