BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	4,544,907	T→C	T72T (ACA→ACG)	RPPX_20290 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	4,544,907	0	T	C	98.6%	412.6 / NA	143	T72T (ACA→ACG)	RPPX_20290	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (67/74); minor base G (1/1); total (68/75)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 151 total aligned reads displayed.

CGCCGGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTGGCGG  >  CP009974/4544760‑4545054

cgccgGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTcgtg                                                                                                                                                  >  1:203933/1‑151 (MQ=17)

 gccgGGTACAGGCTCTCCAGCGTCTTGTTCATCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTcgtgt                                                                                                                                                 >  1:1341514/1‑151 (MQ=17)

  ccgGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTcgtgtg                                                                                                                                                <  2:3061909/151‑1 (MQ=14)

   cgGGTACAGGCTCGCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGGGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGc                                                                                                                                               <  2:2091503/151‑1 (MQ=9)

    gggTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCt                                                                                                                                              >  1:1149809/1‑151 (MQ=14)

    gggTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCt                                                                                                                                              <  1:3810462/151‑1 (MQ=17)

     ggTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTc                                                                                                                                             <  2:2164774/151‑1 (MQ=14)

        aCAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGGGGTGGGCCGGGTTTCGTGTGCTCCAg                                                                                                                                          >  2:2696599/1‑151 (MQ=9)

        aCAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAg                                                                                                                                          >  1:4367126/1‑151 (MQ=17)

        aCAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCCCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAg                                                                                                                                          >  2:3033342/1‑151 (MQ=17)

         cAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGt                                                                                                                                         >  2:3620144/1‑151 (MQ=17)

         cAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGt                                                                                                                                         <  1:3945286/151‑1 (MQ=14)

          aGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCCGtt                                                                                                                                        >  2:4949442/1‑151 (MQ=14)

          aGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGtt                                                                                                                                        >  1:1404861/1‑151 (MQ=17)

          aGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGtt                                                                                                                                        <  1:5076331/151‑1 (MQ=17)

              tctcCAGCGTCTTGTTCAGCAGCATGGCGACGAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCAGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCCCCAGTCGcgc                                                                                                                                    >  1:5314518/1‑149 (MQ=11)

              tctcCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTc                                                                                                                                    >  2:3147757/1‑151 (MQ=14)

              tctcCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTc                                                                                                                                    >  1:634326/1‑151 (MQ=14)

              tctcCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTc                                                                                                                                    <  2:924377/151‑1 (MQ=14)

               ctcCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTcg                                                                                                                                   >  1:5124787/1‑151 (MQ=11)

                                                                                tGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCAt                                                                  >  2:1572042/1‑151 (MQ=11)

                                                                                   gCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCAGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGcc                                                               >  2:4149045/1‑151 (MQ=14)

                                                                                    cTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCCCAGGTCCCGGGCCATGCCt                                                              >  2:5179262/1‑151 (MQ=9)

                                                                                     tGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCtt                                                             >  1:3114804/1‑151 (MQ=14)

                                                                                     tGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCtt                                                             <  1:3920393/151‑1 (MQ=17)

                                                                                      gTTCGGCATCCAGCCGGTAGCACGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtc                                                            >  2:4828566/1‑151 (MQ=14)

                                                                                       ttCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcg                                                           >  1:4126862/1‑151 (MQ=17)

                                                                                         cGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggc                                                         >  1:3299968/1‑151 (MQ=14)

                                                                                         cGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggc                                                         <  1:4697148/151‑1 (MQ=17)

                                                                                         cGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTGTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTTGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggc                                                         >  2:4574402/1‑151 (MQ=9)

                                                                                          ggCAGCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcg                                                        <  2:3625653/151‑1 (MQ=18)

                                                                                           gCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCCGGGCCATGCCTtcggcgc                                                       >  2:5370770/1‑150 (MQ=12)

                                                                                           gCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgt                                                       >  2:4070033/1‑151 (MQ=18)

                                                                                            cATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtc                                                      <  1:2856885/151‑1 (MQ=21)

                                                                                             aTCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcg                                                     <  2:107957/151‑1 (MQ=21)

                                                                                             aTCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcg                                                     >  2:4306712/1‑151 (MQ=18)

                                                                                              tCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcgg                                                    >  1:4402476/1‑151 (MQ=21)

                                                                                               ccAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcggc                                                   >  1:4170740/1‑151 (MQ=21)

                                                                                               ccAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcggc                                                   <  1:5363386/151‑1 (MQ=25)

                                                                                                   ccGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTGGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGc                                               >  2:568858/1‑151 (MQ=21)

                                                                                                     ggTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcac                                             >  1:4924691/1‑151 (MQ=37)

                                                                                                      gTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcacc                                            >  2:2527079/1‑151 (MQ=25)

                                                                                                       tAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcacca                                           <  1:5315952/151‑1 (MQ=38)

                                                                                                       tAGCATGCCGGCACGCGCTCCTGCTCGAGAAGGTGGGCGCGTTTGGTGTTCTCCAGTTGCTCGGCCGGCATCAGGTCCCGCAGCTGATGCTGGGAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcacca                                           >  2:5071848/1‑151 (MQ=11)

                                                                                                        aGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccac                                          <  2:2068012/151‑1 (MQ=38)

                                                                                                        aGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccac                                          <  1:236288/151‑1 (MQ=38)

                                                                                                         gCATGCCGGCACGCGGTCCTGCTCGGTAGGTTGCGCGGGTTTCGGGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTTGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccacc                                         <  1:2718826/151‑1 (MQ=11)

                                                                                                              ccGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccaccaccac                                    >  1:70627/1‑151 (MQ=38)

                                                                                                              ccGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccaccaccac                                    <  2:3421636/151‑1 (MQ=255)

                                                                                                              ccGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccaccaccac                                    <  1:4586705/151‑1 (MQ=255)

                                                                                                               cGGGACGCGCTCCTGCTCGGGAGGTTGGGCGGGTGTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCaccaccacaacc                                   <  2:5166224/151‑1 (MQ=255)

                                                                                                               cGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCCGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGCCGGCGAGCaccacccccacc                                   >  2:2568035/1‑151 (MQ=255)

                                                                                                               cGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCaccaccaccacc                                   <  1:4625959/151‑1 (MQ=255)

                                                                                                                ggCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCg                                  <  2:1633348/151‑1 (MQ=38)

                                                                                                                  cACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGc                                >  1:1877238/1‑151 (MQ=255)

                                                                                                                  cACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGc                                <  2:2924399/151‑1 (MQ=255)

                                                                                                                  cACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGc                                >  1:4936784/1‑151 (MQ=37)

                                                                                                                   aCGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGcc                               >  2:3548070/1‑150 (MQ=255)

                                                                                                                   aCGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCa                               <  1:3684064/151‑1 (MQ=255)

                                                                                                                   aCGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCa                               <  1:3683850/151‑1 (MQ=255)

                                                                                                                      cgcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACtt                            <  1:222303/151‑1 (MQ=255)

                                                                                                                      cgcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACtt                            >  1:1127614/1‑151 (MQ=25)

                                                                                                                       gcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACttt                           >  1:2782870/1‑151 (MQ=37)

                                                                                                                       gcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACttt                           <  1:1194712/151‑1 (MQ=255)

                                                                                                                        cTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCCGGTCCAGCGCCATGCCTTCGGCGCCGGCCACCACCACCACCACCCCCACtctc                          >  2:4899157/1‑151 (MQ=11)

                                                                                                                         tCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGATCCAGGGCCATGCCTGCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCg                         >  2:3396858/1‑151 (MQ=255)

                                                                                                                         gccTGGTCGGGAGGTTGGGGGGGTTTCGTGTGCTCCAGTCGCTCGGACGGCAGCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCg                         <  2:1398709/150‑1 (MQ=11)

                                                                                                                           cTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGc                       <  2:2280628/151‑1 (MQ=255)

                                                                                                                            tGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCCCCACCACCGGCACTTTCGGcc                      >  2:2155981/1‑150 (MQ=255)

                                                                                                                            tGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCt                      <  1:3676006/151‑1 (MQ=255)

                                                                                                                            tGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCt                      <  1:2797414/151‑1 (MQ=255)

                                                                                                                            ggCTCGGGAGGTTGGGCGGGGTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCt                      <  2:1207739/150‑1 (MQ=255)

                                                                                                                              cTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTgg                    <  2:4637470/151‑1 (MQ=255)

                                                                                                                              cTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTgg                    <  1:966229/151‑1 (MQ=255)

                                                                                                                               tCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTggg                   >  1:6956/1‑151 (MQ=255)

                                                                                                                                cGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGt                  <  1:638450/151‑1 (MQ=255)

                                                                                                                                 gggAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTc                 >  2:4327673/1‑151 (MQ=255)

                                                                                                                                 gggAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTc                 <  1:543868/151‑1 (MQ=255)

                                                                                                                                  ggAGGTTGGGCGGGTTTGGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTcc                <  2:619442/151‑1 (MQ=255)

                                                                                                                                  ggAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTcc                >  2:1677069/1‑151 (MQ=255)

                                                                                                                                  ggAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTcc                <  1:4455875/151‑1 (MQ=255)

                                                                                                                                  ggAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTcc                <  2:6956/151‑1 (MQ=255)

                                                                                                                                    aGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAg              <  2:671109/151‑1 (MQ=255)

                                                                                                                                     ggTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAgg             >  1:3803002/1‑151 (MQ=255)

                                                                                                                                           gCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGt       <  2:1539198/151‑1 (MQ=255)

                                                                                                                                           gCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGt       <  1:344031/151‑1 (MQ=255)

                                                                                                                                           gCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTCTCGGCTGGGGCCAGGGGGAGt       >  2:2810758/1‑151 (MQ=255)

                                                                                                                                            cGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTg      >  1:2602764/1‑151 (MQ=255)

                                                                                                                                            cGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTg      <  1:1571053/151‑1 (MQ=255)

                                                                                                                                            cGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTg      >  2:4899465/1‑151 (MQ=255)

                                                                                                                                            cGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTg      >  1:3632081/1‑151 (MQ=255)

                                                                                                                                             gggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTgg     >  1:3124658/1‑151 (MQ=255)

                                                                                                                                             gggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTgg     <  1:3523423/151‑1 (MQ=255)

                                                                                                                                             gggTTTCGTGTGCTCCAGTGGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTgg     <  2:173643/151‑1 (MQ=255)

                                                                                                                                              ggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggc    <  2:2262916/151‑1 (MQ=255)

                                                                                                                                              ggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggc    <  2:2614233/151‑1 (MQ=255)

                                                                                                                                               ttttgGTGTCCTCCAGTTGCCCGGCCGGCATCGGCTCACGTAGTTGATGCTGGTAGGGCGAGACCGACAGGCTCAGGTCCAGGGCTATGCCTTCGGCGTCGGCGAGCACCACCAACACCGGCTCTTTCGGCTGGGTCCAGGGGTAGTggcg   <  2:5016446/150‑1 (MQ=14)

                                                                                                                                               gTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGCTGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggcg   <  2:4764020/151‑1 (MQ=255)

                                                                                                                                               gTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggcg   <  1:4525284/151‑1 (MQ=255)

                                                                                                                                                tttcGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggcgg  >  1:4306137/1‑151 (MQ=255)

CGCCGGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTGGCGG  >  CP009974/4544760‑4545054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`