Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 4,957,191 G→A A208A (GCG→GCA RPPX_21945 → ATPase AAA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099744,957,1910GA99.1% 549.8 / NA 229A208A (GCG→GCARPPX_21945ATPase AAA
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base A (111/115);  total (112/117)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 229 total aligned reads displayed.

CCAAGACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTCACCAGCCAGATGCCGGTGGACAAATGGCATGCGCTGATCGGCGATCCGACCTTGGGCGACGCGATCCTCGACCGTCTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAATGCAACCCTGC  >  CP009974/4957043‑4957337
                                                                                                                                                    |                                                                                                                                                  
ccAAGACTGCCCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACt                                                                                                                                                  <  2:2941673/151‑1 (MQ=255)
ccAAGACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACt                                                                                                                                                  <  1:3047483/151‑1 (MQ=255)
  aaGACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGa                                                                                                                                                <  2:1710575/151‑1 (MQ=255)
  aaGACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGa                                                                                                                                                >  2:2405341/1‑151 (MQ=255)
  aaGACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGa                                                                                                                                                >  1:3548868/1‑151 (MQ=255)
  aaGACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGa                                                                                                                                                <  2:1011515/151‑1 (MQ=255)
   ggACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGGTTAACGCAGCGAAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACGAGCAAGATGACGGTGGATAAATGGCATGCACTGAt                                                                                                                                               <  2:420911/150‑1 (MQ=11)
    gACTGACATGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATc                                                                                                                                              <  2:3343455/151‑1 (MQ=255)
    gACGGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGCCCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATc                                                                                                                                              <  2:106133/151‑1 (MQ=255)
      cTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACTGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCgg                                                                                                                                            <  2:3786507/151‑1 (MQ=11)
      cTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCgg                                                                                                                                            <  2:587911/151‑1 (MQ=255)
      cTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCgg                                                                                                                                            <  1:1485691/151‑1 (MQ=255)
      cTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCgg                                                                                                                                            >  2:3796928/1‑151 (MQ=255)
       tGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGc                                                                                                                                           <  1:1538807/151‑1 (MQ=255)
         accgggggATCTGGGACGACTGGGCACTGGCCCCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGa                                                                                                                                         <  2:3410322/144‑1 (MQ=11)
         aCCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGa                                                                                                                                         >  2:1265386/1‑151 (MQ=255)
          ccTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTCCGGCCACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCCTGCACTGATCGCCGac                                                                                                                                        >  2:3121261/1‑150 (MQ=11)
          ccTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGAt                                                                                                                                        >  2:1839031/1‑151 (MQ=255)
           ctgctgATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATc                                                                                                                                       <  2:4187460/151‑1 (MQ=255)
           ctgctgATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATc                                                                                                                                       <  1:135240/151‑1 (MQ=255)
               tgATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGAc                                                                                                                                   >  2:2701778/1‑151 (MQ=255)
                ggtCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGAcc                                                                                                                                  <  2:4794523/149‑1 (MQ=255)
                gATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGAcc                                                                                                                                  >  2:2512870/1‑151 (MQ=255)
                  tCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCtt                                                                                                                                <  1:5229271/151‑1 (MQ=255)
                   cTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTg                                                                                                                               >  1:4720447/1‑151 (MQ=255)
                   cTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTg                                                                                                                               >  1:4263324/1‑151 (MQ=255)
                    ttGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTgg                                                                                                                              >  1:3429231/1‑151 (MQ=255)
                    ttGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTgg                                                                                                                              >  1:1725428/1‑151 (MQ=255)
                           acTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGAtgc                                                                                                                       <  2:1965487/151‑1 (MQ=255)
                           acTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGAtgc                                                                                                                       <  1:1964609/151‑1 (MQ=255)
                            cTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGAtgcg                                                                                                                      >  2:1351981/1‑151 (MQ=255)
                            cTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGAtgcg                                                                                                                      <  1:783983/151‑1 (MQ=255)
                             tGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGa                                                                                                                     >  2:788180/1‑151 (MQ=255)
                              ggggCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGgcgatgcgat                                                                                                                    >  1:4499670/1‑151 (MQ=255)
                                 gCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCt                                                                                                                 >  1:2505608/1‑151 (MQ=255)
                                  ccTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTc                                                                                                                <  1:1748794/151‑1 (MQ=11)
                                   cTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCg                                                                                                               <  1:901892/151‑1 (MQ=255)
                                    tGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGa                                                                                                              >  1:650342/1‑151 (MQ=11)
                                      gCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGAcc                                                                                                            >  2:1413686/1‑151 (MQ=11)
                                      gCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGAcc                                                                                                            >  1:5123809/1‑151 (MQ=11)
                                      gCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGAcc                                                                                                            <  1:1844714/151‑1 (MQ=255)
                                      gCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGAcc                                                                                                            >  1:3109891/1‑151 (MQ=255)
                                       cACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCg                                                                                                           <  1:3961295/151‑1 (MQ=255)
                                       cACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCg                                                                                                           >  2:4916111/1‑151 (MQ=11)
                                       cACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCg                                                                                                           <  1:5042488/151‑1 (MQ=11)
                                        cccGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCgg                                                                                                          <  1:5389119/150‑2 (MQ=11)
                                               aCCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGTTTGGTGc                                                                                                   >  1:246630/1‑151 (MQ=11)
                                               aCCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGc                                                                                                   >  2:1142502/1‑151 (MQ=11)
                                                ccGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGca                                                                                                  >  1:5079836/1‑151 (MQ=11)
                                                 cGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGcac                                                                                                 <  1:2594287/151‑1 (MQ=11)
                                                 cGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGcac                                                                                                 <  1:3652200/151‑1 (MQ=11)
                                                 cGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGcac                                                                                                 >  2:5376444/1‑151 (MQ=11)
                                                  gCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGcaca                                                                                                >  1:3004684/1‑151 (MQ=11)
                                                    aGCGCAACGCCGCGACATGCTCGAACTGCTGGACGCCCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAAc                                                                                              <  2:3312889/151‑1 (MQ=11)
                                                         aaCGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTa                                                                                         >  1:4777823/1‑151 (MQ=11)
                                                          aCGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTac                                                                                        >  2:679263/1‑150 (MQ=11)
                                                          aCGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTAt                                                                                        <  1:1575398/151‑1 (MQ=11)
                                                          aCGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTAt                                                                                        <  2:3562897/151‑1 (MQ=11)
                                                           cgccgcGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATc                                                                                       <  2:365772/151‑1 (MQ=11)
                                                           cgccgcGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATc                                                                                       <  1:1778899/151‑1 (MQ=11)
                                                           cgccgcGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATc                                                                                       >  1:4974857/1‑151 (MQ=11)
                                                            gccgcGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCg                                                                                      <  1:2050262/151‑1 (MQ=11)
                                                             ccgcGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCgg                                                                                     <  1:2846035/151‑1 (MQ=11)
                                                                                            tACGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGc                                                      >  2:4637018/1‑151 (MQ=11)
                                                                                             aCGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCg                                                     >  1:1223379/1‑151 (MQ=11)
                                                                                              cGGCAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGt                                                    <  1:1606737/151‑1 (MQ=11)
                                                                                                 cAACCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGcg                                                 <  1:3573661/151‑1 (MQ=11)
                                                                                                  caCCGCTGGACACTGGTGACCAGCGAGATGCCGGTGGATAAATGGAATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATACTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGcga                                                <  2:2309267/150‑1 (MQ=11)
                                                                                                  aaCCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGcga                                                >  1:4556800/1‑151 (MQ=11)
                                                                                                  aaCCGCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGcga                                                >  1:2440923/1‑151 (MQ=11)
                                                                                                      gCTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGaa                                            <  2:4966805/151‑1 (MQ=14)
                                                                                                       cTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGaaa                                           >  1:3755854/1‑151 (MQ=14)
                                                                                                       cTCGACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGaaa                                           >  2:2957760/1‑151 (MQ=11)
                                                                                                          gACACTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTg                                        >  1:1672887/1‑151 (MQ=11)
                                                                                                           acacTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGa                                       >  1:1174772/1‑151 (MQ=11)
                                                                                                            cacTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGAc                                      >  1:1331585/1‑151 (MQ=14)
                                                                                                             acTGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGAcg                                     >  1:1011018/1‑151 (MQ=11)
                                                                                                               tGGTGACCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGAcggc                                   <  2:4377925/151‑1 (MQ=14)
                                                                                                                  tgaCCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACggcggc                                >  1:1764369/3‑151 (MQ=14)
                                                                                                                   gaCCAGCCAGATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCa                               <  2:4499670/150‑1 (MQ=14)
                                                                                                                        gccagATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGAc                          >  1:2936358/1‑151 (MQ=14)
                                                                                                                         ccagATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGAcg                         >  2:2097484/1‑150 (MQ=14)
                                                                                                                           agATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTc                       <  1:1912427/151‑1 (MQ=14)
                                                                                                                            gATGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCa                      >  1:2647206/1‑151 (MQ=14)
                                                                                                                             aTGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAg                     <  2:192198/151‑1 (MQ=14)
                                                                                                                             aTGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAg                     >  2:5147718/1‑151 (MQ=14)
                                                                                                                             aTGCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAg                     >  1:4042522/1‑151 (MQ=14)
                                                                                                                               gCCGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTTACGGCGGCAGGGACTTCAGAc                   >  1:33694/1‑151 (MQ=14)
                                                                                                                                ccGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACt                  <  1:4670002/151‑1 (MQ=14)
                                                                                                                                 cGGTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTa                 >  1:230626/1‑151 (MQ=14)
                                                                                                                                  ggTGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTaa                <  2:168090/151‑1 (MQ=14)
                                                                                                                                    tGGATAAATGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACa              <  1:2402768/151‑1 (MQ=14)
                                                                                                                                    tGGATAAATGGCATGCACTGACCGGCGATCCGACCTTGTGCGATGTGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCCAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTacaa              >  2:5294264/1‑148 (MQ=14)
                                                                                                                                     ggataaaTGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACaa             <  1:3466926/147‑1 (MQ=14)
                                                                                                                                      gataaaTGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAAt            >  2:3594129/4‑151 (MQ=14)
                                                                                                                                       ataaaTGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAATg           >  1:3033622/3‑151 (MQ=14)
                                                                                                                                         aaaTGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAATGCa         <  2:1535545/151‑1 (MQ=14)
                                                                                                                                         aaaTGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAATGCa         >  1:4568834/1‑151 (MQ=14)
                                                                                                                                          aaTGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAATGCaa        <  2:1748512/151‑1 (MQ=14)
                                                                                                                                            tGGCATGCACTGATCGGCGATCCGACCTTGGGCGATGCGATCCTCGACCGGTTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAATGCAAcc      >  2:748255/1‑151 (MQ=14)
                                                                                                                                                    |                                                                                                                                                  
CCAAGACTGACCTGCTGATCTTGGACGACTGGGGCCTGGCACCGTTTACCGCAGCGCAACGCCGCGACATGCTCGAACTGCTGGACGACCGCTACGGCAACCGCTCGACACTGGTCACCAGCCAGATGCCGGTGGACAAATGGCATGCGCTGATCGGCGATCCGACCTTGGGCGACGCGATCCTCGACCGTCTGGTGCACAACGCTTATCGGATCGAACTGAAGGGCGAATCGATGCGCAAGCGTGCGACGAAATTGACGGCGGCAGGGACTTCAGACTAACAATGCAACCCTGC  >  CP009974/4957043‑4957337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: