| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 753,050 | A→G | intergenic (+50/‑204) | RPPX_03275 → / → RPPX_03280 | porin/NAD‑dependent dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 753,050 | 0 | A | G | 99.6% | 827.2 / NA | 237 | intergenic (+50/‑204) | RPPX_03275/RPPX_03280 | porin/NAD‑dependent dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (117/118); minor base C (0/1); total (117/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 238 total aligned reads displayed.
AGCGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAACCACC > CP009974/752902‑753196 | cGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGcggc < 1:454019/151‑1 (MQ=255) tGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGcggcgg > 1:903345/1‑151 (MQ=255) tGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGcggcgg > 1:2395950/1‑151 (MQ=255) gAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCggg < 1:1196602/151‑1 (MQ=255) aaTGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTg < 2:658348/151‑1 (MQ=255) aaTGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTg < 1:1339054/151‑1 (MQ=255) gtcGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGgag < 2:3970643/149‑1 (MQ=255) gTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGAtt > 1:526993/1‑151 (MQ=255) aaCTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTGGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTgg < 2:5342670/151‑1 (MQ=255) aCTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGc > 2:75379/1‑151 (MQ=255) cTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGcc > 2:3445841/1‑151 (MQ=255) gtcgATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGCGCGGCGGGTGGCGGTTGGCcagc > 2:4944477/1‑151 (MQ=255) gtcgATTCGCCGGGAGTACAGCAATAACGAGTTTGATGAGGACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTGACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCcagc < 2:4709070/151‑1 (MQ=255) ctcgATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCCTTGTCGTTGCTCTGATCATGACCCGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCcagc < 2:1552454/150‑1 (MQ=255) gATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAgg < 2:3547446/151‑1 (MQ=255) aTTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAggg > 1:149165/1‑151 (MQ=255) aTTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAggg < 2:2395950/151‑1 (MQ=255) cGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggcc > 2:1154080/1‑151 (MQ=255) cGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggcc < 1:1251635/151‑1 (MQ=255) gggATTACGGCAAGAACGAGGGTGATGAGAACCGGTTGATCTTCAACTACCCGTTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCct < 2:3702671/151‑1 (MQ=37) aTTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCtt < 1:1621822/151‑1 (MQ=255) ttACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTc < 1:4655731/151‑1 (MQ=255) tACACCAATAACGAGTTTGATGAGAACCGGACGATCTTCAACTCCCCATTGTCGTTCCTCTGCTCATGACCTGCGGATTTGCCCGCGAATACGGTGGCGGCGGAGACTGTGACCGGCGGGTGGAGACTGGCCAGCAGGGCCGGCCTCTTcg < 2:1607397/151‑1 (MQ=25) aCAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTTCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTcgc < 1:3193752/151‑1 (MQ=255) cAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTcgcg > 2:120375/1‑151 (MQ=255) aTAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTaa > 1:3701698/1‑151 (MQ=255) cGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAccc < 2:4972652/151‑1 (MQ=255) cGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAccc < 1:5092548/151‑1 (MQ=255) aGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGc > 1:4208847/1‑151 (MQ=255) gTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGcc > 1:3958200/1‑150 (MQ=255) gTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCt < 1:506540/151‑1 (MQ=255) ttggatgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTGACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTc < 2:5196975/148‑1 (MQ=255) ttGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTcc > 1:386918/1‑151 (MQ=255) tgatgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCt < 1:2844915/151‑1 (MQ=255) gatgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTa > 1:1025254/1‑151 (MQ=255) atgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc < 1:1888722/151‑1 (MQ=255) atgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc > 2:4013167/1‑151 (MQ=255) gaACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACgggg > 2:5361985/1‑150 (MQ=255) aaCCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCg > 2:3109058/1‑151 (MQ=255) ccGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGAc < 2:840183/151‑1 (MQ=255) cGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGAcc < 1:2266552/151‑1 (MQ=255) cGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGAcc > 1:4445258/1‑151 (MQ=255) ggTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACcg > 1:1560540/1‑151 (MQ=255) ttGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACctcg > 1:1740420/1‑151 (MQ=255) ttGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACcgcg < 2:649749/151‑1 (MQ=255) ttGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACcgcg < 2:230648/151‑1 (MQ=255) tGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCgcgc < 1:2537595/151‑1 (MQ=255) tGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGCGGAGATTGGCCAGCAGGGCCGGCCTCCTCGCGGCTACACCCGCTCCTACGGGCGAcccccc > 2:2539488/1‑147 (MQ=25) gATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCa < 2:1328653/151‑1 (MQ=255) ctCTTCAACTGCCCATTGGCGTGGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGCGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAg < 2:3527836/150‑1 (MQ=21) cTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGc > 2:4757316/1‑151 (MQ=255) cTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGc < 1:3504914/151‑1 (MQ=255) ttCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGcc > 1:2009935/1‑151 (MQ=255) tCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCt < 2:2234150/151‑1 (MQ=255) aaCTACCCGTTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCttt < 2:3788212/151‑1 (MQ=255) aaCTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCttt < 1:4956630/151‑1 (MQ=255) aCTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTc < 2:1738593/151‑1 (MQ=255) cTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCg > 2:145969/1‑151 (MQ=255) aCCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGcc < 2:3594134/151‑1 (MQ=255) cATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCttt > 1:2996009/1‑151 (MQ=255) cATGGTGGTTGCTCTGAGCATGGCCTGCGGATTTGCCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCttt < 2:2946901/151‑1 (MQ=21) ttGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAccc > 1:5155254/1‑151 (MQ=255) ttGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAccc < 1:1763818/151‑1 (MQ=255) tGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCcg < 2:2124370/151‑1 (MQ=255) tGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCcg > 2:3346628/1‑151 (MQ=255) gcgctGATCATGGCCGGCGGATTTACGGGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCcgc < 2:2437598/148‑1 (MQ=21) gCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAccc < 1:5197247/106‑1 (MQ=255) tctGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGa < 2:2983195/151‑1 (MQ=255) ctGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGaa < 1:4013167/151‑1 (MQ=255) gATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGaaaa < 2:4167996/151‑1 (MQ=255) cATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGc < 1:1503850/151‑1 (MQ=255) aTGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGcc < 1:2747552/151‑1 (MQ=255) tGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCg < 2:2009935/151‑1 (MQ=255) ccTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCa < 1:4287751/151‑1 (MQ=255) ccTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCa < 1:5080905/151‑1 (MQ=255) tGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCaaa > 2:4449220/1‑151 (MQ=255) tGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCaaa > 1:3404190/1‑151 (MQ=255) gCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCaaaa < 2:903345/151‑1 (MQ=255) ggATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgc > 2:1686223/1‑151 (MQ=255) ggATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgc < 1:2558122/151‑1 (MQ=255) ggATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgc < 2:1319340/151‑1 (MQ=255) gATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgcc > 1:1439837/1‑151 (MQ=255) gATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgcc > 2:5304642/1‑151 (MQ=255) cccGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCaa < 1:746832/151‑1 (MQ=255) cccGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCaa < 1:263535/151‑1 (MQ=255) ggagaCGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTc < 2:2737039/147‑1 (MQ=255) gAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTc < 2:4836770/151‑1 (MQ=255) gAAGACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTc < 1:5431230/151‑1 (MQ=255) aaTACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCa < 2:46823/151‑1 (MQ=255) aTACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCCGCAAAAGCCGCCCAAGCCCCac > 2:4387949/1‑150 (MQ=255) tACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCAtt < 1:3917892/151‑1 (MQ=255) tACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCAtt < 2:4170129/151‑1 (MQ=255) ggcggcGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGacaac > 1:2442067/1‑151 (MQ=255) ggcggcGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGacaac > 1:4511878/1‑151 (MQ=255) cggcggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAacac > 1:2124189/1‑151 (MQ=255) gcggAGGCGGTGAGCGGTGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAacacac < 2:5140849/151‑1 (MQ=255) ggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCaa > 2:4599370/1‑131 (MQ=255) ggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCaa < 1:4599370/131‑1 (MQ=255) gaCGGTGAGCGGCGGGTGGAGATTGGCCAGCACGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCACAAGCCTCATTGACAACACACAGAac > 1:4154383/1‑151 (MQ=255) ggTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACCGAaccac > 2:3850526/1‑151 (MQ=255) | AGCGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAACCACC > CP009974/752902‑753196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |