| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 5,426,639 | T→C | V332V (GTA→GTG) | RPPX_24160 ← | damage‑inducible protein CinA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 5,426,639 | 0 | T | C | 99.4% | 385.7 / ‑4.6 | 158 | V332V (GTA→GTG) | RPPX_24160 | damage‑inducible protein CinA |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (86/71); total (87/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01 | |||||||||||
Only 100 of 165 total aligned reads displayed.
GAACCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACTACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCGAA > CP009974/5426491‑5426786 | aaCCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCaccacc < 1:724872/151‑1 (MQ=255) aCCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGccaccacca < 2:1211899/151‑1 (MQ=255) cGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGc > 1:1096674/1‑151 (MQ=255) cGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGc > 2:3130932/1‑151 (MQ=255) ggCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCg < 1:962182/151‑1 (MQ=255) gCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCgg < 2:142479/151‑1 (MQ=255) gCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCgg > 1:1751511/1‑151 (MQ=255) gCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCgg < 2:4384594/151‑1 (MQ=255) cTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCggg > 2:2483194/1‑151 (MQ=255) cTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCggg > 2:5095859/1‑151 (MQ=255) tGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGa < 2:1635242/151‑1 (MQ=255) gggCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGa < 2:4027554/150‑1 (MQ=255) ggCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGaa < 1:1876180/151‑1 (MQ=255) ggCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGaa < 1:1974717/151‑1 (MQ=255) gCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAAc < 1:384377/151‑1 (MQ=38) cAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCa > 1:2141478/1‑151 (MQ=37) cAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCa < 1:2736823/151‑1 (MQ=25) aGCAACGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGt < 2:1752465/151‑1 (MQ=21) gCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTg < 1:806770/151‑1 (MQ=18) gCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTg < 2:2707092/151‑1 (MQ=18) aCCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGc < 1:4502992/151‑1 (MQ=21) ccGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCt < 1:409058/151‑1 (MQ=21) ccGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAAAGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCCGCGGGAACCAGTGGCt > 1:300001/1‑151 (MQ=16) cGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTc > 2:4000310/1‑151 (MQ=21) cGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTc > 2:789175/1‑151 (MQ=21) gAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTcc < 2:1575442/151‑1 (MQ=21) gAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTcc < 2:5363870/151‑1 (MQ=18) gAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTcc > 1:1456781/1‑151 (MQ=21) gAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTcc > 1:369313/1‑151 (MQ=21) gAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTcc > 2:564200/1‑151 (MQ=21) aaGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTccc > 2:1212109/1‑150 (MQ=18) aaGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCa > 1:2087706/1‑151 (MQ=18) aaGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCa > 1:4190505/1‑151 (MQ=18) gcgcGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACg < 1:223323/151‑1 (MQ=17) gcgGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCt > 1:816980/1‑151 (MQ=17) gggCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTc > 1:3908844/1‑151 (MQ=14) gggCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTc > 1:2908408/1‑151 (MQ=14) gggCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTc < 1:2834232/151‑1 (MQ=17) gggCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCCGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTc > 2:5307615/1‑151 (MQ=14) aaTTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCCGTGGCTCCACGCTTCCGGa > 2:3550856/1‑151 (MQ=11) aaTTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGa > 1:3903706/1‑151 (MQ=11) aaTTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGa > 2:2316714/1‑151 (MQ=11) tttgCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACTACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCa > 1:3117215/4‑151 (MQ=1) cacaACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCgag > 2:1052904/1‑151 (MQ=11) cGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAAt > 2:292459/1‑151 (MQ=17) gCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGCCCATCTTGGTACCCGAGAACATa > 2:5357345/1‑151 (MQ=9) cAAAGTAGTACGCGTCGTTGGACCGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGaaactccc > 2:49228/1‑146 (MQ=9) aaGTGGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGTGAAAATACCgg < 2:4173796/151‑1 (MQ=9) aaGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCgg > 2:3827678/1‑151 (MQ=14) agtagtACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGc > 1:3157301/1‑151 (MQ=17) gtagtaCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCa > 1:930069/1‑151 (MQ=14) gtagtaCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCa < 1:451115/151‑1 (MQ=17) tagtaCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCaa > 2:3219891/1‑151 (MQ=14) tagtaCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCaa > 2:4570842/1‑151 (MQ=17) tagtaCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCaa > 1:2729468/1‑151 (MQ=17) taCGCGTCGCTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGa < 2:4267744/151‑1 (MQ=17) aCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGAt < 1:564200/151‑1 (MQ=17) aCGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAAAACAGTCAACCACCGCCTGGGCAAATGCATCGACCATCTTGGTCCCCGAGAAAATACCGGCAAAGAt < 2:1243795/151‑1 (MQ=11) cgcgTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATg < 2:601905/151‑1 (MQ=17) gcgTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGc < 1:4880805/151‑1 (MQ=14) cgtcgtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGcc < 2:4218919/151‑1 (MQ=17) cgtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCcgc > 1:2376168/1‑151 (MQ=17) gtTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCcgcg > 2:39407/1‑151 (MQ=17) ttGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcgg < 2:1599016/151‑1 (MQ=17) tGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcggc < 1:5277021/151‑1 (MQ=17) tGGACAGCACGAAAGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCgcggc < 2:2902981/151‑1 (MQ=17) gaaaGCAGGAAGGTCAGCGGCATGCTGGTCAGCGCCACCAGCAGCGGGAACCAGTGGATAAACAATACCGGAAGCCAGTTCATCAGCGTCGGGGCAAATGCATAAACCATCCTGGAACCAGTGAAAGCACCGGCAAAGGTGCCCGCGGCGa < 2:2680134/148‑1 (MQ=2) aCAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGaa < 1:3033585/151‑1 (MQ=17) cAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAac < 1:3776541/151‑1 (MQ=17) cAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAac < 2:4041571/151‑1 (MQ=17) aGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAaca < 1:2024573/151‑1 (MQ=17) aCGAAGGTGAGCGGCATGCTGGTCAGCGCCACCACCCGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACca < 2:2935991/151‑1 (MQ=12) gAAGGTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACcagc > 2:3706407/1‑151 (MQ=14) aGGTCAGCGGCACGCTGGTCAGCGGCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACcagcag < 1:611063/151‑1 (MQ=9) ggTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCagcagc < 1:2642353/151‑1 (MQ=17) gTCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAgcagca > 2:527638/1‑151 (MQ=17) tCAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcac > 1:4369785/1‑151 (MQ=14) cAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacc > 2:113654/1‑151 (MQ=17) cAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacc > 1:5203850/1‑151 (MQ=14) cAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacc > 2:2457819/1‑151 (MQ=17) cAGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacc > 1:3140999/1‑151 (MQ=17) aGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCCTCGACCATCTTGGTACCCGAGAAAATACCCGCAAAGATGCCCGCGGCGCACACCAGCAGcaccc > 1:93095/1‑150 (MQ=255) aGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacca > 1:4747691/1‑151 (MQ=17) aGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacca < 2:298999/151‑1 (MQ=17) aGCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcacca > 2:886827/1‑151 (MQ=17) gCGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGcaccac < 1:4205701/151‑1 (MQ=17) cGGCATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACg > 2:4972331/1‑151 (MQ=17) cATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTc < 1:2821680/151‑1 (MQ=21) cATGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTc > 1:85871/1‑151 (MQ=18) aTGCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCa > 2:2012480/1‑151 (MQ=25) gCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATg < 1:58274/151‑1 (MQ=21) gCTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATg > 2:150258/1‑151 (MQ=25) cTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATgg < 1:354508/151‑1 (MQ=25) cTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATgg > 1:2527521/1‑151 (MQ=25) cTGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAAGACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATgg > 1:2527695/1‑151 (MQ=25) tGGTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGc < 1:4835876/151‑1 (MQ=25) ggTCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCg > 1:1215754/1‑151 (MQ=21) tCAGCGCCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGtt > 2:2119416/1‑151 (MQ=25) cgcCACCACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGccc > 2:2704741/1‑151 (MQ=25) ccaccaccaGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCGa > 2:930583/1‑151 (MQ=18) | GAACCGGCTGGCCAAGCACCGAAGCGCGGGCAATTTCCACCGGGTCGATGCCGTACGCGGCCGCGGCATTGGCCAGGATCGGCACAACGCCAAAGTAGTACGCGTCGTTGGACAGCACGAAGGTCAGCGGCATGCTGGTCAGCGCCACTACCAGCGGGAACCAGTGGCTCCACGCTTCCGGAATCCAGTCCACCAGCGTCTGGGCCAATGCATCGACCATCTTGGTACCCGAGAAAATACCGGCAAAGATGCCCGCGGCGAACACCAGCAGCACCACGGTCATGGCGTTGCCCGAA > CP009974/5426491‑5426786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |