BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	5,598,979	C→T	G235G (GGC→GGT)	RPPX_24920 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	5,598,979	0	C	T	76.4%	639.3 / 199.7	349	G235G (GGC→GGT)	RPPX_24920	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (48/34); new base T (127/139); total (175/174)
Fisher's exact test for biased strand distribution p-value = 1.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.45e-01

Only 100 of 353 total aligned reads displayed.

CGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACCGGCGGAGGCTTTC  >  CP009974/5598829‑5599126

  gggTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGa                                                                                                                                                   <  2:2566299/150‑1 (MQ=12)

    gTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGc                                                                                                                                                 >  1:3860577/1‑151 (MQ=12)

    gTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGc                                                                                                                                                 <  1:1925848/151‑1 (MQ=17)

     tATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGcc                                                                                                                                                >  1:1123186/1‑151 (MQ=14)

     tATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGcc                                                                                                                                                <  1:3131111/151‑1 (MQ=12)

      aTGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGccc                                                                                                                                               <  2:63624/151‑1 (MQ=17)

        gggAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCgg                                                                                                                                             >  1:4366477/1‑151 (MQ=17)

        gggAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTCCGCCCCCTGGCGCACCGGCGCGCCCgc                                                                                                                                             >  2:2841047/1‑150 (MQ=255)

         ggAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGc                                                                                                                                                     >  2:2685736/1‑142 (MQ=17)

         ggAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCggg                                                                                                                                            >  1:1753297/1‑150 (MQ=17)

           aaTCCCTCCGCCACTTCATCGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGa                                                                                                                                          <  2:3810775/151‑1 (MQ=12)

               ccTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATg                                                                                                                                      <  2:2922298/151‑1 (MQ=12)

               ccTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCCGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCCGCGAAATg                                                                                                                                      >  2:1413103/1‑151 (MQ=255)

                cTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGc                                                                                                                                     >  2:3294195/1‑151 (MQ=17)

                cTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGc                                                                                                                                     >  1:3920053/1‑151 (MQ=14)

                  ccGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAg                                                                                                                                   >  1:1207034/1‑151 (MQ=17)

                     ccACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGc                                                                                                                                >  1:1324286/1‑151 (MQ=12)

                     ccACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGc                                                                                                                                <  2:1301734/151‑1 (MQ=12)

                       ccTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCaa                                                                                                                              <  1:1586875/150‑1 (MQ=17)

                       aCTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGCGAAATGCAGGGCaa                                                                                                                              >  2:782949/1‑151 (MQ=17)

                       aCTTCATGAACCACGGCCCGGACAAGCTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCaa                                                                                                                              <  2:3942811/151‑1 (MQ=255)

                        cTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCaaa                                                                                                                             <  1:4129709/151‑1 (MQ=12)

                          tCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCaaaaa                                                                                                                           >  1:4169678/1‑151 (MQ=17)

                                  cACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGc                                                                                                                   <  1:833987/151‑1 (MQ=12)

                                  cACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGc                                                                                                                   >  2:71623/1‑151 (MQ=17)

                                  cACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGc                                                                                                                   >  2:2582787/1‑151 (MQ=17)

                                   aCGGCCCGGACAGACTCCGCCCGCCCGGTGAACCCAACAGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCCGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCa                                                                                                                  <  2:5356690/151‑1 (MQ=255)

                                   aCGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGTCGGGCAAAAAGAACTCGCa                                                                                                                  >  2:4668497/1‑151 (MQ=255)

                                      gCCCGGACAACCTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAAtt                                                                                                               <  1:2338704/151‑1 (MQ=12)

                                      gCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAAtt                                                                                                               >  1:2544492/1‑151 (MQ=17)

                                      gCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCACAAAGAACTGGCAAtt                                                                                                               >  2:2991287/1‑151 (MQ=14)

                                          ggACAAACTCCCCCCGCCCGGTGAACGCGACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCg                                                                                                           <  2:2446736/151‑1 (MQ=255)

                                          ggACAAACTCCCCCCGCCCGGGGAACCCAACGGGTGGCACAAGCCGCTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAGCTGGGAATAGcac                                                                                                           >  2:1105117/1‑149 (MQ=11)

                                           gACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGt                                                                                                          >  1:5144/1‑151 (MQ=17)

                                            aCAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGtt                                                                                                         >  2:4425851/1‑151 (MQ=17)

                                            aCAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGtt                                                                                                         <  2:4803574/151‑1 (MQ=12)

                                            aCAAACCCCCCCCGCCCGGTGAACCCAGCTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGtt                                                                                                         <  2:2140648/151‑1 (MQ=9)

                                             cAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTc                                                                                                        >  1:5267005/1‑151 (MQ=17)

                                              aaaCTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCt                                                                                                       >  1:4243626/1‑151 (MQ=12)

                                              aaaCTCCCCCCGCCCGGTGAACCCAACGGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCt                                                                                                       <  2:4209604/151‑1 (MQ=14)

                                                aCTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTgg                                                                                                     <  2:4141885/151‑1 (MQ=17)

                                                  tCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGc                                                                                                   >  1:625270/1‑151 (MQ=9)

                                                  tCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGc                                                                                                   >  2:1845662/1‑151 (MQ=17)

                                                    cccccGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTCACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGccg                                                                                                 <  1:3053900/151‑3 (MQ=14)

                                                     ccccGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGt                                                                                                <  1:586670/151‑1 (MQ=19)

                                                     ccccGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGt                                                                                                <  1:915358/151‑1 (MQ=19)

                                                        cgcccgGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCt                                                                                             >  1:4643923/1‑151 (MQ=21)

                                                          cccgGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGt                                                                                           <  1:2038748/151‑1 (MQ=19)

                                                           ccgGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGtt                                                                                          >  1:5074501/1‑151 (MQ=18)

                                                             ggTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTcc                                                                                        <  1:2662716/151‑1 (MQ=21)

                                                              gTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTccc                                                                                       <  1:5331323/151‑1 (MQ=255)

                                                              gTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTccc                                                                                       <  2:2307241/151‑1 (MQ=255)

                                                               tGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTcccc                                                                                      >  2:1720825/1‑151 (MQ=255)

                                                                gAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCt                                                                                     <  1:1729950/151‑1 (MQ=255)

                                                                  aCCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTAc                                                                                   >  1:337091/1‑151 (MQ=255)

                                                                  aCCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTAc                                                                                   <  1:239029/151‑1 (MQ=255)

                                                                  aCCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTAc                                                                                   >  1:1961285/1‑151 (MQ=25)

                                                                      aaCTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAAcc                                                                               >  2:304267/1‑151 (MQ=19)

                                                                         tggtggCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGa                                                                            <  1:10558/151‑1 (MQ=25)

                                                                         tggtggCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGa                                                                            >  1:4536530/1‑151 (MQ=19)

                                                                             ggCACAAGCCGCTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGt                                                                        <  2:3388817/151‑1 (MQ=255)

                                                                                 caAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGct                                                                    <  2:4058869/151‑1 (MQ=255)

                                                                                  aaGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGctc                                                                   >  2:1991729/1‑151 (MQ=255)

                                                                                   ggCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGctct                                                                  <  2:1399302/150‑1 (MQ=255)

                                                                                     ccACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGctctct                                                                <  2:4535998/151‑1 (MQ=255)

                                                                                      cACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAGCCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTg                                                               <  2:5177884/151‑1 (MQ=255)

                                                                                       aCTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGt                                                              <  1:4064327/151‑1 (MQ=255)

                                                                                        cTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGtt                                                             <  2:898003/151‑1 (MQ=255)

                                                                                             cGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTAc                                                        <  2:388853/151‑1 (MQ=255)

                                                                                              gCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACt                                                       <  2:4942590/151‑1 (MQ=255)

                                                                                               ccATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACtg                                                      <  2:3993097/151‑1 (MQ=255)

                                                                                                 aTCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACtgtg                                                    >  1:2111567/1‑151 (MQ=255)

                                                                                                  tCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTgtgt                                                   >  2:3550516/1‑151 (MQ=255)

                                                                                                    tgacTGACCCCGGCCGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGAGAAATGCAGGGCAAAAAGAACTGGCAATTGCGGTTCTGGGCGGGGCTGTTTCCCTACAAGCTGACCGTCGCTCTCTTTTGGCACTgtgtgg                                                 >  2:4683366/4‑149 (MQ=14)

                                                                                                       cTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCa                                              >  2:1638994/1‑151 (MQ=255)

                                                                                                         gcccccGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAg                                            <  1:2773537/149‑1 (MQ=255)

                                                                                                         gACCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAg                                            <  1:4488235/151‑1 (MQ=255)

                                                                                                          aCCCCGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGc                                           >  1:1290191/1‑151 (MQ=255)

                                                                                                             ccGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCttt                                        <  2:3655658/151‑1 (MQ=255)

                                                                                                             ccGGCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCttt                                        >  1:2896665/1‑151 (MQ=255)

                                                                                                                gCAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCa                                     <  2:4917366/151‑1 (MQ=255)

                                                                                                                 cAGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCaa                                    >  1:1444348/1‑151 (MQ=255)

                                                                                                                  aGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAAt                                   >  2:1899908/1‑151 (MQ=255)

                                                                                                                  aGAAGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAAt                                   >  2:2757762/1‑151 (MQ=255)

                                                                                                                    aaGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGt                                 >  1:101306/1‑151 (MQ=255)

                                                                                                                    aaGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGt                                 >  2:4264519/1‑151 (MQ=255)

                                                                                                                     aGCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTc                                <  2:600303/151‑1 (MQ=255)

                                                                                                                      gCCTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAAGGAAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTcc                               <  2:3135944/151‑1 (MQ=255)

                                                                                                                       ccTGGCGCCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCg                              <  1:3294195/151‑1 (MQ=255)

                                                                                                                             gcCACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAgc                        >  1:1677371/1‑151 (MQ=255)

                                                                                                                              ccACTACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAgcc                       >  2:3197575/1‑150 (MQ=255)

                                                                                                                               ggctgcGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAgcgc                      <  2:3426717/146‑1 (MQ=255)

                                                                                                                                  tACGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGccac                   <  1:2285578/151‑1 (MQ=255)

                                                                                                                                   aCGCCCCTTGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGccacc                  <  1:3688071/151‑1 (MQ=255)

                                                                                                                                         cttGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACcggc            <  1:2433521/149‑1 (MQ=255)

                                                                                                                                           tGGCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACcggcgg          >  1:2639050/1‑151 (MQ=255)

                                                                                                                                            ggCGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACCGGCGGa         <  1:1380084/151‑1 (MQ=255)

                                                                                                                                              cGAACCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACCGGCGGAgg       <  2:1274088/151‑1 (MQ=255)

                                                                                                                                                aaCCGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACCGGCGGAGGCt     >  1:4935394/1‑151 (MQ=255)

                                                                                                                                                   cGGTGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACCGGCGGAGGCTTTc  >  1:356720/1‑151 (MQ=255)

CGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGCCACTACGCCCCCTGGCGAACCGGCGAGCCCGGTGAAATGCAGGGCAAAAAGAACTGGCAATTGCCGTTCTGGGCGGTGCTGTTCCCCTACAACCTGACCGTCGCTCTCTGTTGGTACTGTGTCTGCAAGCTTTTCAATGTCCGTGCAGCGCCACCACCGGCGGAGGCTTTC  >  CP009974/5598829‑5599126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`